Resource
| Id | summary/johansen2025Crossspecies/atac_fragments/macaque/3738c40f955491c83b2ecec9d0fe332b78d9f134 |
|---|---|
| Type | fragment_score |
| Version | 0 |
| Summary | ATAC fragments for macaque from library 3738c40f955491c83b2ecec9d0fe332b78d9f134 |
| Description | |
| Labels |
|
Scores (2)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| cell | str |
cell |
 |
ATCCCGCGTACCGGAT-1, GGTACTTAGGCATGTT-1, AAGTGTTGTGCTGTAA-1, ACTTACTTCAGGCCTA-1, GCAATAGAGACAAACG-1 (top 5 of 6587 values) | ||
| count | int |
count |
 |
[1, 1] |
|
n counts fragments; sd is the population standard deviation.
Fragments
| Chromosome | Fragments |
|---|---|
| all chromosomes | 265356749 |
| NC_005943.1 | 11114 |
| NC_027914.1 | 246009 |
| NC_041754.1 | 23888373 |
| NC_041755.1 | 16632218 |
| NC_041756.1 | 16886758 |
| NC_041757.1 | 14311452 |
| NC_041758.1 | 12625408 |
| NC_041759.1 | 14109595 |
| NC_041760.1 | 17359526 |
| NC_041761.1 | 11810519 |
| NC_041762.1 | 12321465 |
| NC_041763.1 | 13077273 |
| NC_041764.1 | 12845396 |
| NC_041765.1 | 10278247 |
| NC_041766.1 | 10155968 |
| NC_041767.1 | 14166837 |
| NC_041768.1 | 11170679 |
| NC_041769.1 | 12424637 |
| NC_041770.1 | 6960825 |
| NC_041771.1 | 5901435 |
| NC_041772.1 | 10987164 |
| NC_041773.1 | 10988320 |
| NC_041774.1 | 5660641 |
| NW_021160097.1 | 28 |
| NW_021160098.1 | 696 |
| NW_021160099.1 | 87 |
| NW_021160102.1 | 449 |
| NW_021160105.1 | 145 |
| NW_021160106.1 | 1221 |
| NW_021160107.1 | 132 |
| NW_021160109.1 | 2150 |
| NW_021160110.1 | 6190 |
| NW_021160111.1 | 2249 |
| NW_021160113.1 | 27126 |
| NW_021160114.1 | 2196 |
| NW_021160116.1 | 118 |
| NW_021160121.1 | 301 |
| NW_021160122.1 | 982 |
| NW_021160123.1 | 1316 |
| NW_021160125.1 | 29 |
| NW_021160136.1 | 324 |
| NW_021160140.1 | 703 |
| NW_021160141.1 | 948 |
| NW_021160142.1 | 2918 |
| NW_021160144.1 | 19105 |
| NW_021160145.1 | 177 |
| NW_021160147.1 | 391 |
| NW_021160148.1 | 851 |
| NW_021160150.1 | 2561 |
| NW_021160155.1 | 691 |
| NW_021160158.1 | 597 |
| NW_021160159.1 | 759 |
| NW_021160161.1 | 10140 |
| NW_021160167.1 | 86 |
| NW_021160168.1 | 46 |
| NW_021160175.1 | 8198 |
| NW_021160179.1 | 340 |
| NW_021160182.1 | 1659 |
| NW_021160184.1 | 737 |
| NW_021160185.1 | 144 |
| NW_021160186.1 | 1790 |
| NW_021160187.1 | 230 |
| NW_021160188.1 | 432 |
| NW_021160189.1 | 1484 |
| NW_021160190.1 | 428 |
| NW_021160191.1 | 463 |
| NW_021160193.1 | 18 |
| NW_021160196.1 | 2996 |
| NW_021160197.1 | 374 |
| NW_021160199.1 | 365 |
| NW_021160200.1 | 735 |
| NW_021160201.1 | 951 |
| NW_021160202.1 | 342 |
| NW_021160203.1 | 1349 |
| NW_021160204.1 | 839 |
| NW_021160205.1 | 135 |
| NW_021160206.1 | 562 |
| NW_021160207.1 | 2129 |
| NW_021160209.1 | 3372 |
| NW_021160211.1 | 1523 |
| NW_021160220.1 | 2012 |
| NW_021160221.1 | 715 |
| NW_021160222.1 | 307 |
| NW_021160223.1 | 2908 |
| NW_021160225.1 | 1032 |
| NW_021160226.1 | 1310 |
| NW_021160228.1 | 261 |
| NW_021160229.1 | 553 |
| NW_021160231.1 | 380 |
| NW_021160233.1 | 777 |
| NW_021160234.1 | 6134 |
| NW_021160236.1 | 549 |
| NW_021160237.1 | 1286 |
| NW_021160238.1 | 2370 |
| NW_021160239.1 | 185 |
| NW_021160242.1 | 134 |
| NW_021160243.1 | 44 |
| NW_021160244.1 | 7251 |
| NW_021160245.1 | 477 |
| NW_021160248.1 | 303 |
| NW_021160249.1 | 868 |
| NW_021160250.1 | 121 |
| NW_021160251.1 | 1142 |
| NW_021160252.1 | 2586 |
| NW_021160255.1 | 873 |
| NW_021160263.1 | 125 |
| NW_021160266.1 | 126 |
| NW_021160268.1 | 277 |
| NW_021160270.1 | 610 |
| NW_021160271.1 | 658 |
| NW_021160272.1 | 1325 |
| NW_021160273.1 | 177 |
| NW_021160277.1 | 82 |
| NW_021160278.1 | 559 |
| NW_021160279.1 | 914 |
| NW_021160282.1 | 1962 |
| NW_021160284.1 | 132 |
| NW_021160285.1 | 377 |
| NW_021160291.1 | 127 |
| NW_021160293.1 | 1555 |
| NW_021160294.1 | 1427 |
| NW_021160295.1 | 588 |
| NW_021160297.1 | 978 |
| NW_021160298.1 | 356 |
| NW_021160300.1 | 1680 |
| NW_021160305.1 | 8 |
| NW_021160306.1 | 555 |
| NW_021160307.1 | 726 |
| NW_021160308.1 | 558 |
| NW_021160310.1 | 4854 |
| NW_021160311.1 | 2678 |
| NW_021160312.1 | 3185 |
| NW_021160313.1 | 1461 |
| NW_021160319.1 | 460 |
| NW_021160320.1 | 442 |
| NW_021160324.1 | 1424 |
| NW_021160325.1 | 458 |
| NW_021160326.1 | 894 |
| NW_021160327.1 | 1564 |
| NW_021160328.1 | 5924 |
| NW_021160329.1 | 588 |
| NW_021160338.1 | 58 |
| NW_021160339.1 | 142 |
| NW_021160341.1 | 290 |
| NW_021160347.1 | 1874 |
| NW_021160353.1 | 914 |
| NW_021160354.1 | 305 |
| NW_021160355.1 | 1162 |
| NW_021160356.1 | 207 |
| NW_021160357.1 | 261 |
| NW_021160358.1 | 782 |
| NW_021160359.1 | 927 |
| NW_021160361.1 | 218 |
| NW_021160362.1 | 269 |
| NW_021160363.1 | 979 |
| NW_021160364.1 | 950 |
| NW_021160365.1 | 1513 |
| NW_021160366.1 | 1461 |
| NW_021160367.1 | 2970 |
| NW_021160368.1 | 146 |
| NW_021160369.1 | 163 |
| NW_021160370.1 | 2358 |
| NW_021160371.1 | 305 |
| NW_021160372.1 | 974 |
| NW_021160373.1 | 1359 |
| NW_021160374.1 | 1496 |
| NW_021160375.1 | 4735 |
| NW_021160376.1 | 10752 |
| NW_021160381.1 | 34 |
| NW_021160383.1 | 2070 |
| NW_021160384.1 | 135 |
| NW_021160401.1 | 95 |
| NW_021160410.1 | 3434 |
| NW_021160417.1 | 276 |
| NW_021160452.1 | 182 |
| NW_021160482.1 | 3 |
| NW_021160484.1 | 377 |
| NW_021160495.1 | 1533 |
| NW_021160514.1 | 167 |
| NW_021160523.1 | 79 |
| NW_021160525.1 | 113 |
| NW_021160535.1 | 340 |
| NW_021160549.1 | 442 |
| NW_021160573.1 | 1705 |
| NW_021160589.1 | 9 |
| NW_021160606.1 | 8732 |
| NW_021160623.1 | 320 |
| NW_021160625.1 | 18 |
| NW_021160629.1 | 24 |
| NW_021160635.1 | 20 |
| NW_021160655.1 | 506 |
| NW_021160656.1 | 99 |
| NW_021160678.1 | 28 |
| NW_021160682.1 | 2898 |
| NW_021160688.1 | 722 |
| NW_021160701.1 | 4380 |
| NW_021160725.1 | 103 |
| NW_021160726.1 | 21367 |
| NW_021160734.1 | 47 |
| NW_021160757.1 | 21 |
| NW_021160770.1 | 21302 |
| NW_021160772.1 | 294 |
| NW_021160805.1 | 802 |
| NW_021160821.1 | 47 |
| NW_021160827.1 | 13985 |
| NW_021160832.1 | 30 |
| NW_021160834.1 | 158 |
| NW_021160835.1 | 3 |
| NW_021160848.1 | 26 |
| NW_021160868.1 | 10 |
| NW_021160890.1 | 237 |
| NW_021160903.1 | 916 |
| NW_021160919.1 | 292 |
| NW_021160925.1 | 51 |
| NW_021160946.1 | 1038 |
| NW_021160955.1 | 160 |
| NW_021160961.1 | 187 |
| NW_021160976.1 | 504 |
| NW_021160983.1 | 11 |
| NW_021160986.1 | 2 |
| NW_021161033.1 | 13 |
| NW_021161038.1 | 1146 |
| NW_021161041.1 | 160 |
| NW_021161043.1 | 21 |
| NW_021161046.1 | 2252 |
| NW_021161062.1 | 189 |
| NW_021161066.1 | 1046 |
| NW_021161106.1 | 329 |
| NW_021161107.1 | 94 |
| NW_021161113.1 | 285 |
| NW_021161114.1 | 4918 |
| NW_021161131.1 | 6 |
| NW_021161133.1 | 565 |
| NW_021161138.1 | 18 |
| NW_021161152.1 | 269 |
| NW_021161164.1 | 776 |
| NW_021161166.1 | 401 |
| NW_021161184.1 | 91 |
| NW_021161201.1 | 284 |
| NW_021161211.1 | 210 |
| NW_021161213.1 | 49 |
| NW_021161224.1 | 1849 |
| NW_021161226.1 | 1207 |
| NW_021161241.1 | 37 |
| NW_021161247.1 | 2 |
| NW_021161253.1 | 7 |
| NW_021161261.1 | 249 |
| NW_021161269.1 | 485 |
| NW_021161274.1 | 2 |
| NW_021161282.1 | 3028 |
| NW_021161303.1 | 55 |
| NW_021161305.1 | 41 |
| NW_021161307.1 | 175 |
| NW_021161312.1 | 30 |
| NW_021161320.1 | 791 |
| NW_021161336.1 | 193 |
| NW_021161338.1 | 49 |
| NW_021161340.1 | 168 |
| NW_021161348.1 | 440 |
| NW_021161355.1 | 1394 |
| NW_021161360.1 | 52 |
| NW_021161364.1 | 536 |
| NW_021161377.1 | 1465 |
| NW_021161379.1 | 61 |
| NW_021161380.1 | 1 |
| NW_021161385.1 | 46 |
| NW_021161392.1 | 2822 |
| NW_021161394.1 | 258 |
| NW_021161396.1 | 17 |
| NW_021161399.1 | 635 |
| NW_021161404.1 | 134 |
| NW_021161413.1 | 647 |
| NW_021161421.1 | 23 |
| NW_021161422.1 | 64 |
| NW_021161427.1 | 278 |
| NW_021161433.1 | 80 |
| NW_021161437.1 | 64 |
| NW_021161446.1 | 162 |
| NW_021161463.1 | 8 |
| NW_021161468.1 | 140 |
| NW_021161470.1 | 46 |
| NW_021161483.1 | 8 |
| NW_021161486.1 | 721 |
| NW_021161494.1 | 47 |
| NW_021161497.1 | 109 |
| NW_021161505.1 | 382 |
| NW_021161507.1 | 447 |
| NW_021161508.1 | 1859 |
| NW_021161519.1 | 573 |
| NW_021161520.1 | 11245 |
| NW_021161523.1 | 302 |
| NW_021161525.1 | 1461 |
| NW_021161526.1 | 684 |
| NW_021161532.1 | 58 |
| NW_021161535.1 | 271 |
| NW_021161537.1 | 3202 |
| NW_021161545.1 | 3828 |
| NW_021161552.1 | 70 |
| NW_021161554.1 | 601 |
| NW_021161561.1 | 973 |
| NW_021161562.1 | 1181 |
| NW_021161567.1 | 183 |
| NW_021161570.1 | 14 |
| NW_021161582.1 | 825 |
| NW_021161585.1 | 1986 |
| NW_021161590.1 | 4284 |
| NW_021161593.1 | 2131 |
| NW_021161596.1 | 10048 |
| NW_021161601.1 | 262 |
| NW_021161608.1 | 129 |
| NW_021161609.1 | 72 |
| NW_021161614.1 | 398 |
| NW_021161616.1 | 196 |
| NW_021161617.1 | 12 |
| NW_021161627.1 | 260 |
| NW_021161633.1 | 2505 |
| NW_021161642.1 | 79 |
| NW_021161648.1 | 10376 |
| NW_021161679.1 | 359 |
| NW_021161680.1 | 319 |
| NW_021161686.1 | 2771 |
| NW_021161694.1 | 343 |
| NW_021161695.1 | 500 |
| NW_021161696.1 | 277 |
| NW_021161699.1 | 1215 |
| NW_021161700.1 | 27 |
| NW_021161713.1 | 111 |
| NW_021161715.1 | 26 |
| NW_021161718.1 | 1636 |
| NW_021161725.1 | 485 |
| NW_021161737.1 | 603 |
| NW_021161743.1 | 149 |
| NW_021161747.1 | 78 |
| NW_021161754.1 | 3972 |
| NW_021161759.1 | 57 |
| NW_021161767.1 | 808 |
| NW_021161769.1 | 452 |
| NW_021161772.1 | 984 |
| NW_021161784.1 | 124 |
| NW_021161790.1 | 1749 |
| NW_021161794.1 | 291 |
| NW_021161796.1 | 241 |
| NW_021161798.1 | 406 |
| NW_021161830.1 | 449 |
| NW_021161832.1 | 198 |
| NW_021161839.1 | 622 |
| NW_021161842.1 | 463 |
| NW_021161843.1 | 345 |
| NW_021161845.1 | 4313 |
| NW_021161850.1 | 27034 |
| NW_021161853.1 | 3402 |
| NW_021161857.1 | 281 |
| NW_021161862.1 | 536 |
| NW_021161876.1 | 757 |
| NW_021161878.1 | 674 |
| NW_021161881.1 | 1251 |
| NW_021161888.1 | 2668 |
| NW_021161902.1 | 728 |
| NW_021161927.1 | 521 |
| NW_021161934.1 | 596 |
| NW_021161939.1 | 2146 |
| NW_021161954.1 | 1338 |
| NW_021161955.1 | 876 |
| NW_021161956.1 | 6554 |
| NW_021161958.1 | 1442 |
| NW_021161961.1 | 1472 |
| NW_021161962.1 | 116 |
| NW_021161965.1 | 374 |
| NW_021161996.1 | 602 |
| NW_021162004.1 | 82 |
| NW_021162007.1 | 632 |
| NW_021162009.1 | 9510 |
| NW_021162025.1 | 1139 |
| NW_021162035.1 | 512 |
| NW_021162047.1 | 350 |
| NW_021162055.1 | 2565 |
| NW_021162083.1 | 965 |
| NW_021162091.1 | 5400 |
| NW_021162100.1 | 8745 |
| NW_021162108.1 | 2146 |
| NW_021162157.1 | 361 |
| NW_021162208.1 | 143 |
| NW_021162222.1 | 710 |
| NW_021162226.1 | 319 |
| NW_021162246.1 | 3014 |
| NW_021162251.1 | 543 |
| NW_021162253.1 | 10 |
| NW_021162263.1 | 75 |
| NW_021162265.1 | 1828 |
| NW_021162274.1 | 4507 |
| NW_021162277.1 | 232 |
| NW_021162460.1 | 11 |
| NW_021162463.1 | 42 |
| NW_021162495.1 | 90 |
| NW_021162553.1 | 13 |
| NW_021162593.1 | 23 |
| NW_021162599.1 | 1169 |
| NW_021162621.1 | 65 |
| NW_021162643.1 | 1554 |
| NW_021162814.1 | 38 |
| NW_021162871.1 | 101 |
| NW_021162949.1 | 3 |
| NW_021163002.1 | 4 |
Fragment lengths
| fragments | min | max | mean | median | |
|---|---|---|---|---|---|
| fragments | 265356749 | 1 | 5038 | 159.95 | 128 |
×
Files
| Filename | Size | md5 |
|---|---|---|
| 3738c40f955491c83b2ecec9d0fe332b78d9f134.gz | 2.5 GB | 063a5ec6def643dcbe8b324bd55aec24 |
| 3738c40f955491c83b2ecec9d0fe332b78d9f134.gz.tbi | 1.15 MB | 7605581bf713bd6489f8fb695f9fe140 |
| fragment_count_dist_plot.py | 853.0 B | 9d735ee8c687286d50484e7f1e398e60 |
| genomic_resource.yaml | 1.5 KB | 6e34c29fb55d8f309c1273064db74114 |
| statistics/ |