Resource
| Id | summary/johansen2025Crossspecies/atac_fragments/macaque/3dcfc8f873b5cc75274575e4f4ee380b88e2c7eb |
|---|---|
| Type | fragment_score |
| Version | 0 |
| Summary | ATAC fragments for macaque from library 3dcfc8f873b5cc75274575e4f4ee380b88e2c7eb |
| Description | |
| Labels |
|
Scores (2)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| cell | str |
cell |
 |
AGATGAAGTATCTGGA-1, TGCATGAGTCACCTAT-1, AGCCGCTAGTTTGCGG-1, GCTTGTTGTGTCCTGC-1, CTAATTGAGGTCAAAG-1 (top 5 of 5528 values) | ||
| count | int |
count |
 |
[1, 1] |
|
n counts fragments; sd is the population standard deviation.
Fragments
| Chromosome | Fragments |
|---|---|
| all chromosomes | 292658964 |
| NC_005943.1 | 333 |
| NC_027914.1 | 1550 |
| NC_041754.1 | 26747131 |
| NC_041755.1 | 18325926 |
| NC_041756.1 | 18834531 |
| NC_041757.1 | 15227654 |
| NC_041758.1 | 13565333 |
| NC_041759.1 | 15309383 |
| NC_041760.1 | 19307730 |
| NC_041761.1 | 13192411 |
| NC_041762.1 | 14048960 |
| NC_041763.1 | 14892323 |
| NC_041764.1 | 14075742 |
| NC_041765.1 | 11645124 |
| NC_041766.1 | 11153885 |
| NC_041767.1 | 15535661 |
| NC_041768.1 | 12309616 |
| NC_041769.1 | 13390585 |
| NC_041770.1 | 7597660 |
| NC_041771.1 | 6386091 |
| NC_041772.1 | 11139968 |
| NC_041773.1 | 11960709 |
| NC_041774.1 | 7280216 |
| NW_021160097.1 | 44 |
| NW_021160098.1 | 169 |
| NW_021160099.1 | 66 |
| NW_021160102.1 | 341 |
| NW_021160105.1 | 252 |
| NW_021160106.1 | 926 |
| NW_021160107.1 | 179 |
| NW_021160109.1 | 1629 |
| NW_021160110.1 | 7181 |
| NW_021160111.1 | 1098 |
| NW_021160113.1 | 23218 |
| NW_021160114.1 | 2795 |
| NW_021160116.1 | 93 |
| NW_021160121.1 | 481 |
| NW_021160122.1 | 543 |
| NW_021160123.1 | 628 |
| NW_021160125.1 | 22 |
| NW_021160136.1 | 806 |
| NW_021160140.1 | 951 |
| NW_021160141.1 | 1103 |
| NW_021160142.1 | 3700 |
| NW_021160144.1 | 11262 |
| NW_021160145.1 | 223 |
| NW_021160147.1 | 194 |
| NW_021160148.1 | 1217 |
| NW_021160150.1 | 2512 |
| NW_021160155.1 | 745 |
| NW_021160158.1 | 450 |
| NW_021160159.1 | 968 |
| NW_021160161.1 | 15501 |
| NW_021160167.1 | 66 |
| NW_021160168.1 | 59 |
| NW_021160175.1 | 10940 |
| NW_021160179.1 | 177 |
| NW_021160182.1 | 1925 |
| NW_021160184.1 | 196 |
| NW_021160185.1 | 659 |
| NW_021160186.1 | 1404 |
| NW_021160187.1 | 202 |
| NW_021160188.1 | 1155 |
| NW_021160189.1 | 350 |
| NW_021160190.1 | 1210 |
| NW_021160191.1 | 246 |
| NW_021160193.1 | 27 |
| NW_021160196.1 | 2252 |
| NW_021160197.1 | 628 |
| NW_021160199.1 | 397 |
| NW_021160200.1 | 266 |
| NW_021160201.1 | 1597 |
| NW_021160202.1 | 697 |
| NW_021160203.1 | 947 |
| NW_021160204.1 | 744 |
| NW_021160205.1 | 333 |
| NW_021160206.1 | 975 |
| NW_021160207.1 | 536 |
| NW_021160209.1 | 3889 |
| NW_021160211.1 | 1248 |
| NW_021160220.1 | 2839 |
| NW_021160221.1 | 644 |
| NW_021160222.1 | 169 |
| NW_021160223.1 | 4665 |
| NW_021160225.1 | 1211 |
| NW_021160226.1 | 749 |
| NW_021160228.1 | 302 |
| NW_021160229.1 | 424 |
| NW_021160231.1 | 531 |
| NW_021160233.1 | 1028 |
| NW_021160234.1 | 8578 |
| NW_021160236.1 | 873 |
| NW_021160237.1 | 4987 |
| NW_021160238.1 | 4011 |
| NW_021160239.1 | 280 |
| NW_021160242.1 | 411 |
| NW_021160243.1 | 90 |
| NW_021160244.1 | 12063 |
| NW_021160245.1 | 190 |
| NW_021160248.1 | 210 |
| NW_021160249.1 | 1091 |
| NW_021160250.1 | 325 |
| NW_021160251.1 | 971 |
| NW_021160252.1 | 2621 |
| NW_021160255.1 | 436 |
| NW_021160263.1 | 186 |
| NW_021160266.1 | 186 |
| NW_021160268.1 | 260 |
| NW_021160270.1 | 897 |
| NW_021160271.1 | 473 |
| NW_021160272.1 | 1642 |
| NW_021160273.1 | 214 |
| NW_021160277.1 | 100 |
| NW_021160278.1 | 472 |
| NW_021160279.1 | 1005 |
| NW_021160282.1 | 2788 |
| NW_021160284.1 | 233 |
| NW_021160285.1 | 338 |
| NW_021160291.1 | 62 |
| NW_021160293.1 | 1752 |
| NW_021160294.1 | 1507 |
| NW_021160295.1 | 457 |
| NW_021160297.1 | 934 |
| NW_021160298.1 | 352 |
| NW_021160300.1 | 1666 |
| NW_021160305.1 | 80 |
| NW_021160306.1 | 416 |
| NW_021160307.1 | 689 |
| NW_021160308.1 | 591 |
| NW_021160310.1 | 11712 |
| NW_021160311.1 | 2430 |
| NW_021160312.1 | 3679 |
| NW_021160313.1 | 1605 |
| NW_021160319.1 | 547 |
| NW_021160320.1 | 870 |
| NW_021160324.1 | 1867 |
| NW_021160325.1 | 817 |
| NW_021160326.1 | 419 |
| NW_021160327.1 | 1448 |
| NW_021160328.1 | 6349 |
| NW_021160329.1 | 1068 |
| NW_021160338.1 | 86 |
| NW_021160339.1 | 51 |
| NW_021160341.1 | 418 |
| NW_021160347.1 | 2200 |
| NW_021160353.1 | 764 |
| NW_021160354.1 | 162 |
| NW_021160355.1 | 423 |
| NW_021160356.1 | 500 |
| NW_021160357.1 | 111 |
| NW_021160358.1 | 703 |
| NW_021160359.1 | 1062 |
| NW_021160361.1 | 115 |
| NW_021160362.1 | 225 |
| NW_021160363.1 | 830 |
| NW_021160364.1 | 1082 |
| NW_021160365.1 | 966 |
| NW_021160366.1 | 930 |
| NW_021160367.1 | 3744 |
| NW_021160368.1 | 157 |
| NW_021160369.1 | 180 |
| NW_021160370.1 | 1620 |
| NW_021160371.1 | 561 |
| NW_021160372.1 | 4146 |
| NW_021160373.1 | 2294 |
| NW_021160374.1 | 818 |
| NW_021160375.1 | 3692 |
| NW_021160376.1 | 13106 |
| NW_021160381.1 | 153 |
| NW_021160383.1 | 3939 |
| NW_021160384.1 | 256 |
| NW_021160401.1 | 76 |
| NW_021160410.1 | 5954 |
| NW_021160417.1 | 232 |
| NW_021160452.1 | 200 |
| NW_021160482.1 | 60 |
| NW_021160484.1 | 352 |
| NW_021160495.1 | 15666 |
| NW_021160514.1 | 125 |
| NW_021160523.1 | 174 |
| NW_021160525.1 | 193 |
| NW_021160535.1 | 296 |
| NW_021160549.1 | 642 |
| NW_021160573.1 | 1268 |
| NW_021160589.1 | 2 |
| NW_021160606.1 | 14301 |
| NW_021160623.1 | 137 |
| NW_021160625.1 | 14 |
| NW_021160629.1 | 57 |
| NW_021160635.1 | 32 |
| NW_021160655.1 | 174 |
| NW_021160656.1 | 234 |
| NW_021160678.1 | 16 |
| NW_021160682.1 | 2209 |
| NW_021160688.1 | 844 |
| NW_021160701.1 | 1168 |
| NW_021160725.1 | 49 |
| NW_021160726.1 | 19508 |
| NW_021160734.1 | 51 |
| NW_021160757.1 | 2 |
| NW_021160770.1 | 17641 |
| NW_021160772.1 | 270 |
| NW_021160805.1 | 885 |
| NW_021160821.1 | 17 |
| NW_021160827.1 | 19006 |
| NW_021160832.1 | 10 |
| NW_021160834.1 | 105 |
| NW_021160835.1 | 6 |
| NW_021160848.1 | 4 |
| NW_021160868.1 | 8 |
| NW_021160890.1 | 132 |
| NW_021160903.1 | 564 |
| NW_021160919.1 | 189 |
| NW_021160925.1 | 58 |
| NW_021160946.1 | 960 |
| NW_021160955.1 | 365 |
| NW_021160961.1 | 93 |
| NW_021160976.1 | 868 |
| NW_021160983.1 | 15 |
| NW_021160986.1 | 5 |
| NW_021161026.1 | 7 |
| NW_021161033.1 | 6 |
| NW_021161038.1 | 412 |
| NW_021161041.1 | 249 |
| NW_021161043.1 | 13 |
| NW_021161046.1 | 926 |
| NW_021161062.1 | 19 |
| NW_021161066.1 | 924 |
| NW_021161106.1 | 313 |
| NW_021161107.1 | 163 |
| NW_021161113.1 | 620 |
| NW_021161114.1 | 362 |
| NW_021161131.1 | 4 |
| NW_021161133.1 | 433 |
| NW_021161138.1 | 24 |
| NW_021161152.1 | 337 |
| NW_021161164.1 | 605 |
| NW_021161166.1 | 289 |
| NW_021161184.1 | 230 |
| NW_021161201.1 | 184 |
| NW_021161211.1 | 186 |
| NW_021161213.1 | 25 |
| NW_021161224.1 | 1069 |
| NW_021161226.1 | 734 |
| NW_021161241.1 | 17 |
| NW_021161247.1 | 8 |
| NW_021161253.1 | 69 |
| NW_021161261.1 | 36 |
| NW_021161269.1 | 1115 |
| NW_021161274.1 | 1 |
| NW_021161282.1 | 5909 |
| NW_021161303.1 | 48 |
| NW_021161305.1 | 12 |
| NW_021161307.1 | 81 |
| NW_021161312.1 | 94 |
| NW_021161320.1 | 928 |
| NW_021161336.1 | 436 |
| NW_021161338.1 | 62 |
| NW_021161340.1 | 207 |
| NW_021161348.1 | 250 |
| NW_021161355.1 | 340 |
| NW_021161360.1 | 336 |
| NW_021161364.1 | 370 |
| NW_021161377.1 | 2664 |
| NW_021161379.1 | 3 |
| NW_021161380.1 | 5 |
| NW_021161385.1 | 56 |
| NW_021161392.1 | 8156 |
| NW_021161394.1 | 602 |
| NW_021161396.1 | 21 |
| NW_021161399.1 | 501 |
| NW_021161404.1 | 37 |
| NW_021161413.1 | 87 |
| NW_021161421.1 | 76 |
| NW_021161422.1 | 95 |
| NW_021161427.1 | 292 |
| NW_021161433.1 | 26 |
| NW_021161437.1 | 71 |
| NW_021161446.1 | 91 |
| NW_021161463.1 | 3 |
| NW_021161468.1 | 190 |
| NW_021161470.1 | 40 |
| NW_021161483.1 | 1 |
| NW_021161486.1 | 620 |
| NW_021161494.1 | 35 |
| NW_021161497.1 | 26 |
| NW_021161505.1 | 771 |
| NW_021161507.1 | 516 |
| NW_021161508.1 | 1387 |
| NW_021161519.1 | 389 |
| NW_021161520.1 | 1868 |
| NW_021161523.1 | 480 |
| NW_021161525.1 | 1168 |
| NW_021161526.1 | 1756 |
| NW_021161532.1 | 48 |
| NW_021161535.1 | 47 |
| NW_021161537.1 | 6337 |
| NW_021161545.1 | 9242 |
| NW_021161552.1 | 42 |
| NW_021161554.1 | 539 |
| NW_021161561.1 | 992 |
| NW_021161562.1 | 1661 |
| NW_021161567.1 | 287 |
| NW_021161570.1 | 125 |
| NW_021161582.1 | 1731 |
| NW_021161585.1 | 3427 |
| NW_021161590.1 | 2867 |
| NW_021161593.1 | 3239 |
| NW_021161596.1 | 10628 |
| NW_021161601.1 | 1035 |
| NW_021161608.1 | 186 |
| NW_021161609.1 | 61 |
| NW_021161614.1 | 102 |
| NW_021161616.1 | 14988 |
| NW_021161617.1 | 21 |
| NW_021161627.1 | 501 |
| NW_021161633.1 | 1726 |
| NW_021161642.1 | 404 |
| NW_021161648.1 | 7437 |
| NW_021161679.1 | 548 |
| NW_021161680.1 | 304 |
| NW_021161686.1 | 7432 |
| NW_021161694.1 | 241 |
| NW_021161695.1 | 239 |
| NW_021161696.1 | 175 |
| NW_021161699.1 | 2774 |
| NW_021161700.1 | 34 |
| NW_021161713.1 | 67 |
| NW_021161715.1 | 56 |
| NW_021161718.1 | 1143 |
| NW_021161725.1 | 113 |
| NW_021161737.1 | 926 |
| NW_021161743.1 | 382 |
| NW_021161747.1 | 48 |
| NW_021161754.1 | 6208 |
| NW_021161759.1 | 32 |
| NW_021161767.1 | 298 |
| NW_021161769.1 | 309 |
| NW_021161772.1 | 418 |
| NW_021161784.1 | 165 |
| NW_021161790.1 | 2756 |
| NW_021161794.1 | 126 |
| NW_021161796.1 | 97 |
| NW_021161798.1 | 722 |
| NW_021161830.1 | 548 |
| NW_021161832.1 | 186 |
| NW_021161839.1 | 252 |
| NW_021161842.1 | 304 |
| NW_021161843.1 | 334 |
| NW_021161845.1 | 3458 |
| NW_021161850.1 | 148539 |
| NW_021161853.1 | 1497 |
| NW_021161857.1 | 216 |
| NW_021161862.1 | 253 |
| NW_021161876.1 | 1562 |
| NW_021161878.1 | 2141 |
| NW_021161881.1 | 682 |
| NW_021161888.1 | 2100 |
| NW_021161902.1 | 1785 |
| NW_021161927.1 | 145 |
| NW_021161934.1 | 702 |
| NW_021161939.1 | 4344 |
| NW_021161954.1 | 1267 |
| NW_021161955.1 | 293 |
| NW_021161956.1 | 2329 |
| NW_021161958.1 | 2219 |
| NW_021161961.1 | 632 |
| NW_021161962.1 | 43 |
| NW_021161965.1 | 325 |
| NW_021161996.1 | 166 |
| NW_021162004.1 | 167 |
| NW_021162007.1 | 391 |
| NW_021162009.1 | 10795 |
| NW_021162025.1 | 1242 |
| NW_021162035.1 | 143 |
| NW_021162047.1 | 480 |
| NW_021162055.1 | 1965 |
| NW_021162083.1 | 570 |
| NW_021162091.1 | 3017 |
| NW_021162100.1 | 3611 |
| NW_021162108.1 | 2555 |
| NW_021162157.1 | 294 |
| NW_021162185.1 | 3 |
| NW_021162208.1 | 110 |
| NW_021162222.1 | 99 |
| NW_021162226.1 | 110 |
| NW_021162246.1 | 4627 |
| NW_021162251.1 | 5485 |
| NW_021162253.1 | 26 |
| NW_021162263.1 | 17 |
| NW_021162265.1 | 3333 |
| NW_021162274.1 | 13619 |
| NW_021162277.1 | 310 |
| NW_021162460.1 | 2 |
| NW_021162463.1 | 503 |
| NW_021162495.1 | 39 |
| NW_021162553.1 | 12 |
| NW_021162593.1 | 15 |
| NW_021162599.1 | 2005 |
| NW_021162621.1 | 93 |
| NW_021162643.1 | 1764 |
| NW_021162814.1 | 43 |
| NW_021162871.1 | 138 |
| NW_021162949.1 | 1 |
| NW_021163002.1 | 1 |
Fragment lengths
| fragments | min | max | mean | median | |
|---|---|---|---|---|---|
| fragments | 292658964 | 1 | 5042 | 174.34 | 150 |
×
Files
| Filename | Size | md5 |
|---|---|---|
| 3dcfc8f873b5cc75274575e4f4ee380b88e2c7eb.gz | 2.73 GB | 9bb909ebd8f2106cd6b04bd28e72d98c |
| 3dcfc8f873b5cc75274575e4f4ee380b88e2c7eb.gz.tbi | 1.2 MB | f7b2f155c6838401abfd5b635f5037cc |
| fragment_count_dist_plot.py | 853.0 B | 9d735ee8c687286d50484e7f1e398e60 |
| genomic_resource.yaml | 1.5 KB | e66289fd108c6073b4e9d3b136922a91 |
| statistics/ |