Resource
| Id | summary/johansen2025Crossspecies/atac_fragments/macaque/475aee3773cf5b9028b08418b944d4f66c4f7083 |
|---|---|
| Type | fragment_score |
| Version | 0 |
| Summary | ATAC fragments for macaque from library 475aee3773cf5b9028b08418b944d4f66c4f7083 |
| Description | |
| Labels |
|
Scores (2)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| cell | str |
cell |
 |
GCACGCTAGGTTTACA-1, CGCCTGTGTTAGGTTG-1, GCCTTTATCTCACTAT-1, TCTACCTCAGCACGAA-1, GGCTTCAAGGCGAAAC-1 (top 5 of 6322 values) | ||
| count | int |
count |
 |
[1, 1] |
|
n counts fragments; sd is the population standard deviation.
Fragments
| Chromosome | Fragments |
|---|---|
| all chromosomes | 314841310 |
| NC_005943.1 | 10893 |
| NC_027914.1 | 286474 |
| NC_041754.1 | 27991054 |
| NC_041755.1 | 20143808 |
| NC_041756.1 | 20429591 |
| NC_041757.1 | 17255777 |
| NC_041758.1 | 15483013 |
| NC_041759.1 | 16952394 |
| NC_041760.1 | 20606418 |
| NC_041761.1 | 14217471 |
| NC_041762.1 | 14516098 |
| NC_041763.1 | 15060776 |
| NC_041764.1 | 15626429 |
| NC_041765.1 | 12267328 |
| NC_041766.1 | 12164984 |
| NC_041767.1 | 16677401 |
| NC_041768.1 | 13014751 |
| NC_041769.1 | 14083004 |
| NC_041770.1 | 8575763 |
| NC_041771.1 | 7299859 |
| NC_041772.1 | 12005019 |
| NC_041773.1 | 12783145 |
| NC_041774.1 | 6742914 |
| NW_021160097.1 | 47 |
| NW_021160098.1 | 466 |
| NW_021160099.1 | 129 |
| NW_021160102.1 | 444 |
| NW_021160105.1 | 166 |
| NW_021160106.1 | 1086 |
| NW_021160107.1 | 152 |
| NW_021160109.1 | 1504 |
| NW_021160110.1 | 6739 |
| NW_021160111.1 | 1532 |
| NW_021160113.1 | 28374 |
| NW_021160114.1 | 1740 |
| NW_021160116.1 | 129 |
| NW_021160121.1 | 530 |
| NW_021160122.1 | 941 |
| NW_021160123.1 | 1189 |
| NW_021160125.1 | 30 |
| NW_021160136.1 | 528 |
| NW_021160140.1 | 700 |
| NW_021160141.1 | 1534 |
| NW_021160142.1 | 3294 |
| NW_021160144.1 | 17505 |
| NW_021160145.1 | 260 |
| NW_021160147.1 | 318 |
| NW_021160148.1 | 907 |
| NW_021160150.1 | 2997 |
| NW_021160155.1 | 600 |
| NW_021160158.1 | 800 |
| NW_021160159.1 | 832 |
| NW_021160161.1 | 13266 |
| NW_021160167.1 | 76 |
| NW_021160168.1 | 70 |
| NW_021160175.1 | 8501 |
| NW_021160179.1 | 257 |
| NW_021160182.1 | 2977 |
| NW_021160184.1 | 271 |
| NW_021160185.1 | 193 |
| NW_021160186.1 | 1289 |
| NW_021160187.1 | 424 |
| NW_021160188.1 | 310 |
| NW_021160189.1 | 551 |
| NW_021160190.1 | 416 |
| NW_021160191.1 | 335 |
| NW_021160193.1 | 8 |
| NW_021160196.1 | 2330 |
| NW_021160197.1 | 700 |
| NW_021160199.1 | 288 |
| NW_021160200.1 | 342 |
| NW_021160201.1 | 826 |
| NW_021160202.1 | 442 |
| NW_021160203.1 | 1279 |
| NW_021160204.1 | 944 |
| NW_021160205.1 | 369 |
| NW_021160206.1 | 659 |
| NW_021160207.1 | 367 |
| NW_021160209.1 | 2536 |
| NW_021160211.1 | 1466 |
| NW_021160220.1 | 4288 |
| NW_021160221.1 | 646 |
| NW_021160222.1 | 315 |
| NW_021160223.1 | 4040 |
| NW_021160225.1 | 760 |
| NW_021160226.1 | 1324 |
| NW_021160228.1 | 439 |
| NW_021160229.1 | 431 |
| NW_021160231.1 | 288 |
| NW_021160233.1 | 1002 |
| NW_021160234.1 | 8565 |
| NW_021160236.1 | 400 |
| NW_021160237.1 | 3027 |
| NW_021160238.1 | 4029 |
| NW_021160239.1 | 188 |
| NW_021160242.1 | 448 |
| NW_021160243.1 | 55 |
| NW_021160244.1 | 11215 |
| NW_021160245.1 | 436 |
| NW_021160248.1 | 115 |
| NW_021160249.1 | 1034 |
| NW_021160250.1 | 262 |
| NW_021160251.1 | 886 |
| NW_021160252.1 | 1870 |
| NW_021160255.1 | 437 |
| NW_021160263.1 | 261 |
| NW_021160266.1 | 273 |
| NW_021160268.1 | 370 |
| NW_021160270.1 | 482 |
| NW_021160271.1 | 661 |
| NW_021160272.1 | 1526 |
| NW_021160273.1 | 183 |
| NW_021160277.1 | 104 |
| NW_021160278.1 | 752 |
| NW_021160279.1 | 1484 |
| NW_021160282.1 | 4324 |
| NW_021160284.1 | 368 |
| NW_021160285.1 | 375 |
| NW_021160291.1 | 130 |
| NW_021160293.1 | 1595 |
| NW_021160294.1 | 1474 |
| NW_021160295.1 | 968 |
| NW_021160297.1 | 932 |
| NW_021160298.1 | 370 |
| NW_021160300.1 | 2472 |
| NW_021160305.1 | 77 |
| NW_021160306.1 | 170 |
| NW_021160307.1 | 784 |
| NW_021160308.1 | 544 |
| NW_021160310.1 | 5209 |
| NW_021160311.1 | 3369 |
| NW_021160312.1 | 3082 |
| NW_021160313.1 | 1628 |
| NW_021160319.1 | 410 |
| NW_021160320.1 | 983 |
| NW_021160324.1 | 1363 |
| NW_021160325.1 | 508 |
| NW_021160326.1 | 737 |
| NW_021160327.1 | 1259 |
| NW_021160328.1 | 6348 |
| NW_021160329.1 | 608 |
| NW_021160338.1 | 281 |
| NW_021160339.1 | 108 |
| NW_021160341.1 | 377 |
| NW_021160347.1 | 1789 |
| NW_021160353.1 | 808 |
| NW_021160354.1 | 415 |
| NW_021160355.1 | 1178 |
| NW_021160356.1 | 440 |
| NW_021160357.1 | 153 |
| NW_021160358.1 | 695 |
| NW_021160359.1 | 1081 |
| NW_021160361.1 | 247 |
| NW_021160362.1 | 310 |
| NW_021160363.1 | 1029 |
| NW_021160364.1 | 1077 |
| NW_021160365.1 | 1077 |
| NW_021160366.1 | 2029 |
| NW_021160367.1 | 5599 |
| NW_021160368.1 | 312 |
| NW_021160369.1 | 290 |
| NW_021160370.1 | 2995 |
| NW_021160371.1 | 440 |
| NW_021160372.1 | 5242 |
| NW_021160373.1 | 1343 |
| NW_021160374.1 | 1357 |
| NW_021160375.1 | 5383 |
| NW_021160376.1 | 10830 |
| NW_021160381.1 | 70 |
| NW_021160383.1 | 2348 |
| NW_021160384.1 | 332 |
| NW_021160401.1 | 84 |
| NW_021160410.1 | 1078 |
| NW_021160417.1 | 195 |
| NW_021160452.1 | 149 |
| NW_021160482.1 | 33 |
| NW_021160484.1 | 347 |
| NW_021160495.1 | 5484 |
| NW_021160514.1 | 199 |
| NW_021160523.1 | 149 |
| NW_021160525.1 | 111 |
| NW_021160535.1 | 262 |
| NW_021160549.1 | 726 |
| NW_021160573.1 | 3296 |
| NW_021160589.1 | 14 |
| NW_021160606.1 | 6283 |
| NW_021160623.1 | 17 |
| NW_021160625.1 | 5 |
| NW_021160629.1 | 10 |
| NW_021160635.1 | 53 |
| NW_021160655.1 | 657 |
| NW_021160656.1 | 306 |
| NW_021160678.1 | 33 |
| NW_021160682.1 | 4624 |
| NW_021160688.1 | 1211 |
| NW_021160701.1 | 7421 |
| NW_021160725.1 | 49 |
| NW_021160726.1 | 30171 |
| NW_021160734.1 | 66 |
| NW_021160757.1 | 5 |
| NW_021160770.1 | 38408 |
| NW_021160772.1 | 229 |
| NW_021160805.1 | 686 |
| NW_021160821.1 | 37 |
| NW_021160827.1 | 12917 |
| NW_021160832.1 | 38 |
| NW_021160834.1 | 138 |
| NW_021160835.1 | 4 |
| NW_021160848.1 | 14 |
| NW_021160868.1 | 1 |
| NW_021160890.1 | 339 |
| NW_021160903.1 | 930 |
| NW_021160919.1 | 537 |
| NW_021160925.1 | 70 |
| NW_021160946.1 | 741 |
| NW_021160955.1 | 76 |
| NW_021160961.1 | 11 |
| NW_021160976.1 | 762 |
| NW_021160983.1 | 11 |
| NW_021160986.1 | 5 |
| NW_021161026.1 | 11 |
| NW_021161033.1 | 2 |
| NW_021161038.1 | 591 |
| NW_021161041.1 | 5 |
| NW_021161043.1 | 28 |
| NW_021161046.1 | 1728 |
| NW_021161062.1 | 114 |
| NW_021161066.1 | 1043 |
| NW_021161106.1 | 635 |
| NW_021161107.1 | 74 |
| NW_021161113.1 | 555 |
| NW_021161114.1 | 9388 |
| NW_021161131.1 | 10 |
| NW_021161133.1 | 373 |
| NW_021161138.1 | 30 |
| NW_021161152.1 | 379 |
| NW_021161164.1 | 1005 |
| NW_021161166.1 | 956 |
| NW_021161184.1 | 60 |
| NW_021161201.1 | 334 |
| NW_021161211.1 | 436 |
| NW_021161213.1 | 38 |
| NW_021161224.1 | 2795 |
| NW_021161226.1 | 1162 |
| NW_021161241.1 | 31 |
| NW_021161247.1 | 2 |
| NW_021161253.1 | 7 |
| NW_021161261.1 | 182 |
| NW_021161269.1 | 611 |
| NW_021161274.1 | 1 |
| NW_021161282.1 | 3457 |
| NW_021161303.1 | 100 |
| NW_021161305.1 | 47 |
| NW_021161307.1 | 245 |
| NW_021161312.1 | 9 |
| NW_021161320.1 | 916 |
| NW_021161336.1 | 217 |
| NW_021161338.1 | 164 |
| NW_021161340.1 | 193 |
| NW_021161348.1 | 692 |
| NW_021161355.1 | 2381 |
| NW_021161360.1 | 30 |
| NW_021161364.1 | 694 |
| NW_021161377.1 | 2487 |
| NW_021161379.1 | 8 |
| NW_021161380.1 | 31 |
| NW_021161385.1 | 58 |
| NW_021161392.1 | 5113 |
| NW_021161394.1 | 227 |
| NW_021161396.1 | 15 |
| NW_021161399.1 | 452 |
| NW_021161404.1 | 169 |
| NW_021161413.1 | 108 |
| NW_021161421.1 | 18 |
| NW_021161422.1 | 120 |
| NW_021161427.1 | 349 |
| NW_021161433.1 | 43 |
| NW_021161437.1 | 51 |
| NW_021161446.1 | 84 |
| NW_021161463.1 | 5 |
| NW_021161468.1 | 126 |
| NW_021161470.1 | 32 |
| NW_021161483.1 | 4 |
| NW_021161486.1 | 752 |
| NW_021161494.1 | 69 |
| NW_021161497.1 | 78 |
| NW_021161505.1 | 743 |
| NW_021161507.1 | 674 |
| NW_021161508.1 | 1269 |
| NW_021161519.1 | 937 |
| NW_021161520.1 | 6764 |
| NW_021161523.1 | 129 |
| NW_021161525.1 | 2458 |
| NW_021161526.1 | 504 |
| NW_021161532.1 | 98 |
| NW_021161535.1 | 172 |
| NW_021161537.1 | 3640 |
| NW_021161545.1 | 5280 |
| NW_021161552.1 | 124 |
| NW_021161554.1 | 265 |
| NW_021161561.1 | 1004 |
| NW_021161562.1 | 1030 |
| NW_021161567.1 | 95 |
| NW_021161570.1 | 5 |
| NW_021161582.1 | 1238 |
| NW_021161585.1 | 2301 |
| NW_021161590.1 | 3560 |
| NW_021161593.1 | 2905 |
| NW_021161596.1 | 11355 |
| NW_021161601.1 | 207 |
| NW_021161608.1 | 237 |
| NW_021161609.1 | 42 |
| NW_021161614.1 | 332 |
| NW_021161616.1 | 329 |
| NW_021161617.1 | 46 |
| NW_021161627.1 | 399 |
| NW_021161633.1 | 3039 |
| NW_021161642.1 | 102 |
| NW_021161648.1 | 15353 |
| NW_021161679.1 | 643 |
| NW_021161680.1 | 248 |
| NW_021161686.1 | 2866 |
| NW_021161694.1 | 364 |
| NW_021161695.1 | 676 |
| NW_021161696.1 | 260 |
| NW_021161699.1 | 820 |
| NW_021161700.1 | 39 |
| NW_021161713.1 | 47 |
| NW_021161715.1 | 43 |
| NW_021161718.1 | 2625 |
| NW_021161725.1 | 198 |
| NW_021161737.1 | 364 |
| NW_021161743.1 | 137 |
| NW_021161747.1 | 19 |
| NW_021161754.1 | 3643 |
| NW_021161759.1 | 63 |
| NW_021161767.1 | 567 |
| NW_021161769.1 | 381 |
| NW_021161772.1 | 206 |
| NW_021161784.1 | 126 |
| NW_021161790.1 | 1827 |
| NW_021161794.1 | 34 |
| NW_021161796.1 | 165 |
| NW_021161798.1 | 455 |
| NW_021161830.1 | 448 |
| NW_021161832.1 | 216 |
| NW_021161839.1 | 732 |
| NW_021161842.1 | 257 |
| NW_021161843.1 | 252 |
| NW_021161845.1 | 2510 |
| NW_021161850.1 | 46290 |
| NW_021161853.1 | 3223 |
| NW_021161857.1 | 515 |
| NW_021161862.1 | 349 |
| NW_021161876.1 | 309 |
| NW_021161878.1 | 591 |
| NW_021161881.1 | 2433 |
| NW_021161888.1 | 3391 |
| NW_021161902.1 | 948 |
| NW_021161927.1 | 246 |
| NW_021161934.1 | 1284 |
| NW_021161939.1 | 3049 |
| NW_021161954.1 | 2052 |
| NW_021161955.1 | 437 |
| NW_021161956.1 | 6136 |
| NW_021161958.1 | 92 |
| NW_021161961.1 | 1165 |
| NW_021161962.1 | 129 |
| NW_021161965.1 | 84 |
| NW_021161996.1 | 741 |
| NW_021162004.1 | 117 |
| NW_021162007.1 | 738 |
| NW_021162009.1 | 12672 |
| NW_021162025.1 | 1260 |
| NW_021162035.1 | 218 |
| NW_021162047.1 | 447 |
| NW_021162055.1 | 2307 |
| NW_021162083.1 | 1583 |
| NW_021162091.1 | 11108 |
| NW_021162100.1 | 12473 |
| NW_021162108.1 | 2783 |
| NW_021162157.1 | 421 |
| NW_021162185.1 | 1 |
| NW_021162208.1 | 470 |
| NW_021162222.1 | 501 |
| NW_021162226.1 | 227 |
| NW_021162246.1 | 3336 |
| NW_021162251.1 | 2575 |
| NW_021162253.1 | 8 |
| NW_021162263.1 | 406 |
| NW_021162265.1 | 524 |
| NW_021162274.1 | 6803 |
| NW_021162277.1 | 286 |
| NW_021162460.1 | 1 |
| NW_021162463.1 | 39 |
| NW_021162495.1 | 128 |
| NW_021162553.1 | 87 |
| NW_021162593.1 | 8 |
| NW_021162599.1 | 1469 |
| NW_021162621.1 | 63 |
| NW_021162643.1 | 2004 |
| NW_021162814.1 | 52 |
| NW_021162871.1 | 89 |
| NW_021162949.1 | 3 |
| NW_021163002.1 | 3 |
Fragment lengths
| fragments | min | max | mean | median | |
|---|---|---|---|---|---|
| fragments | 314841310 | 1 | 5040 | 181.16 | 161 |
×
Files
| Filename | Size | md5 |
|---|---|---|
| 475aee3773cf5b9028b08418b944d4f66c4f7083.gz | 2.93 GB | 1e8337b4550034feadbc0a8e35a7b7c5 |
| 475aee3773cf5b9028b08418b944d4f66c4f7083.gz.tbi | 1.27 MB | f7463ad77d85ff3f5648ad622997ebd7 |
| fragment_count_dist_plot.py | 853.0 B | 9d735ee8c687286d50484e7f1e398e60 |
| genomic_resource.yaml | 1.5 KB | 907aacfc5e3803e62c7c339e514daaa2 |
| statistics/ |