Resource
| Id | summary/johansen2025Crossspecies/atac_fragments/macaque/86af4e5bdd31f92b8a1e2d7cc3d65c513b954d91 |
|---|---|
| Type | fragment_score |
| Version | 0 |
| Summary | ATAC fragments for macaque from library 86af4e5bdd31f92b8a1e2d7cc3d65c513b954d91 |
| Description | |
| Labels |
|
Scores (2)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| cell | str |
cell |
 |
GTCTATGCAGGAATCG-1, TACTAAGTCCTCAGCT-1, TGGCCATCAGCCAGTT-1, TGCAGGCTCCGCCTCA-1, TGCTTCCAGCTAAGTC-1 (top 5 of 3615 values) | ||
| count | int |
count |
 |
[1, 1] |
|
n counts fragments; sd is the population standard deviation.
Fragments
| Chromosome | Fragments |
|---|---|
| all chromosomes | 123634194 |
| NC_005943.1 | 5221 |
| NC_027914.1 | 116814 |
| NC_041754.1 | 11357596 |
| NC_041755.1 | 7869162 |
| NC_041756.1 | 7933075 |
| NC_041757.1 | 6622629 |
| NC_041758.1 | 5934813 |
| NC_041759.1 | 6771496 |
| NC_041760.1 | 8132490 |
| NC_041761.1 | 5708204 |
| NC_041762.1 | 6075487 |
| NC_041763.1 | 6028196 |
| NC_041764.1 | 5917253 |
| NC_041765.1 | 5056948 |
| NC_041766.1 | 4780214 |
| NC_041767.1 | 6502463 |
| NC_041768.1 | 5302915 |
| NC_041769.1 | 5427844 |
| NC_041770.1 | 3169637 |
| NC_041771.1 | 2813935 |
| NC_041772.1 | 4335833 |
| NC_041773.1 | 4889930 |
| NC_041774.1 | 2618729 |
| NW_021160097.1 | 21 |
| NW_021160098.1 | 281 |
| NW_021160099.1 | 35 |
| NW_021160102.1 | 149 |
| NW_021160105.1 | 140 |
| NW_021160106.1 | 337 |
| NW_021160107.1 | 157 |
| NW_021160109.1 | 892 |
| NW_021160110.1 | 2697 |
| NW_021160111.1 | 1748 |
| NW_021160113.1 | 10301 |
| NW_021160114.1 | 840 |
| NW_021160116.1 | 32 |
| NW_021160121.1 | 192 |
| NW_021160122.1 | 337 |
| NW_021160123.1 | 363 |
| NW_021160125.1 | 10 |
| NW_021160136.1 | 126 |
| NW_021160140.1 | 445 |
| NW_021160141.1 | 424 |
| NW_021160142.1 | 836 |
| NW_021160144.1 | 7787 |
| NW_021160145.1 | 94 |
| NW_021160147.1 | 114 |
| NW_021160148.1 | 498 |
| NW_021160150.1 | 817 |
| NW_021160155.1 | 284 |
| NW_021160158.1 | 324 |
| NW_021160159.1 | 564 |
| NW_021160161.1 | 4952 |
| NW_021160167.1 | 22 |
| NW_021160168.1 | 23 |
| NW_021160175.1 | 4665 |
| NW_021160179.1 | 121 |
| NW_021160182.1 | 591 |
| NW_021160184.1 | 263 |
| NW_021160185.1 | 88 |
| NW_021160186.1 | 650 |
| NW_021160187.1 | 43 |
| NW_021160188.1 | 442 |
| NW_021160189.1 | 632 |
| NW_021160190.1 | 391 |
| NW_021160191.1 | 103 |
| NW_021160193.1 | 5 |
| NW_021160196.1 | 956 |
| NW_021160197.1 | 333 |
| NW_021160199.1 | 124 |
| NW_021160200.1 | 216 |
| NW_021160201.1 | 477 |
| NW_021160202.1 | 197 |
| NW_021160203.1 | 356 |
| NW_021160204.1 | 879 |
| NW_021160205.1 | 131 |
| NW_021160206.1 | 367 |
| NW_021160207.1 | 462 |
| NW_021160209.1 | 1580 |
| NW_021160211.1 | 1072 |
| NW_021160220.1 | 721 |
| NW_021160221.1 | 128 |
| NW_021160222.1 | 150 |
| NW_021160223.1 | 1251 |
| NW_021160225.1 | 458 |
| NW_021160226.1 | 216 |
| NW_021160228.1 | 120 |
| NW_021160229.1 | 307 |
| NW_021160231.1 | 212 |
| NW_021160233.1 | 379 |
| NW_021160234.1 | 2579 |
| NW_021160236.1 | 429 |
| NW_021160237.1 | 2275 |
| NW_021160238.1 | 2289 |
| NW_021160239.1 | 83 |
| NW_021160242.1 | 133 |
| NW_021160243.1 | 46 |
| NW_021160244.1 | 4071 |
| NW_021160245.1 | 59 |
| NW_021160248.1 | 60 |
| NW_021160249.1 | 505 |
| NW_021160250.1 | 167 |
| NW_021160251.1 | 558 |
| NW_021160252.1 | 709 |
| NW_021160255.1 | 248 |
| NW_021160263.1 | 154 |
| NW_021160266.1 | 103 |
| NW_021160268.1 | 181 |
| NW_021160270.1 | 200 |
| NW_021160271.1 | 312 |
| NW_021160272.1 | 620 |
| NW_021160273.1 | 88 |
| NW_021160277.1 | 51 |
| NW_021160278.1 | 296 |
| NW_021160279.1 | 398 |
| NW_021160282.1 | 447 |
| NW_021160284.1 | 58 |
| NW_021160285.1 | 178 |
| NW_021160291.1 | 19 |
| NW_021160293.1 | 536 |
| NW_021160294.1 | 829 |
| NW_021160295.1 | 275 |
| NW_021160297.1 | 430 |
| NW_021160298.1 | 181 |
| NW_021160300.1 | 694 |
| NW_021160305.1 | 48 |
| NW_021160306.1 | 187 |
| NW_021160307.1 | 345 |
| NW_021160308.1 | 426 |
| NW_021160310.1 | 4072 |
| NW_021160311.1 | 1252 |
| NW_021160312.1 | 1603 |
| NW_021160313.1 | 726 |
| NW_021160319.1 | 331 |
| NW_021160320.1 | 323 |
| NW_021160324.1 | 635 |
| NW_021160325.1 | 431 |
| NW_021160326.1 | 226 |
| NW_021160327.1 | 831 |
| NW_021160328.1 | 2441 |
| NW_021160329.1 | 503 |
| NW_021160338.1 | 83 |
| NW_021160339.1 | 60 |
| NW_021160341.1 | 313 |
| NW_021160347.1 | 1091 |
| NW_021160353.1 | 403 |
| NW_021160354.1 | 128 |
| NW_021160355.1 | 233 |
| NW_021160356.1 | 188 |
| NW_021160357.1 | 88 |
| NW_021160358.1 | 430 |
| NW_021160359.1 | 272 |
| NW_021160361.1 | 92 |
| NW_021160362.1 | 93 |
| NW_021160363.1 | 532 |
| NW_021160364.1 | 596 |
| NW_021160365.1 | 578 |
| NW_021160366.1 | 578 |
| NW_021160367.1 | 1783 |
| NW_021160368.1 | 155 |
| NW_021160369.1 | 136 |
| NW_021160370.1 | 641 |
| NW_021160371.1 | 247 |
| NW_021160372.1 | 884 |
| NW_021160373.1 | 1113 |
| NW_021160374.1 | 1206 |
| NW_021160375.1 | 1749 |
| NW_021160376.1 | 7501 |
| NW_021160381.1 | 32 |
| NW_021160383.1 | 1739 |
| NW_021160384.1 | 96 |
| NW_021160401.1 | 60 |
| NW_021160410.1 | 525 |
| NW_021160417.1 | 85 |
| NW_021160452.1 | 89 |
| NW_021160482.1 | 14 |
| NW_021160484.1 | 100 |
| NW_021160495.1 | 1067 |
| NW_021160514.1 | 96 |
| NW_021160523.1 | 21 |
| NW_021160525.1 | 80 |
| NW_021160535.1 | 107 |
| NW_021160549.1 | 191 |
| NW_021160573.1 | 1077 |
| NW_021160589.1 | 6 |
| NW_021160606.1 | 1330 |
| NW_021160623.1 | 6 |
| NW_021160625.1 | 7 |
| NW_021160629.1 | 10 |
| NW_021160635.1 | 13 |
| NW_021160655.1 | 406 |
| NW_021160656.1 | 37 |
| NW_021160678.1 | 17 |
| NW_021160682.1 | 1278 |
| NW_021160688.1 | 755 |
| NW_021160701.1 | 2740 |
| NW_021160725.1 | 19 |
| NW_021160726.1 | 9425 |
| NW_021160734.1 | 25 |
| NW_021160737.1 | 1 |
| NW_021160757.1 | 4 |
| NW_021160770.1 | 8890 |
| NW_021160772.1 | 111 |
| NW_021160805.1 | 460 |
| NW_021160821.1 | 23 |
| NW_021160827.1 | 6919 |
| NW_021160832.1 | 35 |
| NW_021160834.1 | 65 |
| NW_021160835.1 | 1 |
| NW_021160848.1 | 23 |
| NW_021160868.1 | 2 |
| NW_021160890.1 | 140 |
| NW_021160903.1 | 483 |
| NW_021160919.1 | 47 |
| NW_021160925.1 | 29 |
| NW_021160946.1 | 415 |
| NW_021160955.1 | 139 |
| NW_021160961.1 | 91 |
| NW_021160976.1 | 370 |
| NW_021160983.1 | 6 |
| NW_021160986.1 | 2 |
| NW_021161026.1 | 6 |
| NW_021161033.1 | 4 |
| NW_021161038.1 | 176 |
| NW_021161041.1 | 11 |
| NW_021161043.1 | 39 |
| NW_021161046.1 | 822 |
| NW_021161062.1 | 16 |
| NW_021161066.1 | 534 |
| NW_021161106.1 | 166 |
| NW_021161107.1 | 66 |
| NW_021161113.1 | 296 |
| NW_021161114.1 | 2980 |
| NW_021161131.1 | 9 |
| NW_021161133.1 | 242 |
| NW_021161138.1 | 10 |
| NW_021161152.1 | 121 |
| NW_021161164.1 | 374 |
| NW_021161166.1 | 166 |
| NW_021161184.1 | 32 |
| NW_021161201.1 | 139 |
| NW_021161211.1 | 141 |
| NW_021161213.1 | 20 |
| NW_021161224.1 | 411 |
| NW_021161226.1 | 493 |
| NW_021161241.1 | 42 |
| NW_021161247.1 | 1 |
| NW_021161253.1 | 2 |
| NW_021161261.1 | 48 |
| NW_021161269.1 | 573 |
| NW_021161282.1 | 1743 |
| NW_021161303.1 | 19 |
| NW_021161305.1 | 50 |
| NW_021161307.1 | 63 |
| NW_021161312.1 | 12 |
| NW_021161320.1 | 556 |
| NW_021161336.1 | 656 |
| NW_021161338.1 | 28 |
| NW_021161340.1 | 114 |
| NW_021161348.1 | 279 |
| NW_021161355.1 | 497 |
| NW_021161360.1 | 14 |
| NW_021161364.1 | 195 |
| NW_021161377.1 | 1045 |
| NW_021161379.1 | 16 |
| NW_021161380.1 | 5 |
| NW_021161385.1 | 23 |
| NW_021161392.1 | 2070 |
| NW_021161394.1 | 302 |
| NW_021161396.1 | 14 |
| NW_021161399.1 | 156 |
| NW_021161404.1 | 74 |
| NW_021161413.1 | 74 |
| NW_021161421.1 | 19 |
| NW_021161422.1 | 19 |
| NW_021161427.1 | 97 |
| NW_021161433.1 | 4 |
| NW_021161437.1 | 35 |
| NW_021161446.1 | 103 |
| NW_021161463.1 | 6 |
| NW_021161468.1 | 62 |
| NW_021161470.1 | 19 |
| NW_021161483.1 | 4 |
| NW_021161486.1 | 471 |
| NW_021161494.1 | 68 |
| NW_021161497.1 | 43 |
| NW_021161505.1 | 305 |
| NW_021161507.1 | 298 |
| NW_021161508.1 | 1445 |
| NW_021161519.1 | 301 |
| NW_021161520.1 | 2313 |
| NW_021161523.1 | 103 |
| NW_021161525.1 | 392 |
| NW_021161526.1 | 1192 |
| NW_021161532.1 | 29 |
| NW_021161535.1 | 42 |
| NW_021161537.1 | 1219 |
| NW_021161545.1 | 1718 |
| NW_021161552.1 | 26 |
| NW_021161554.1 | 125 |
| NW_021161561.1 | 555 |
| NW_021161562.1 | 477 |
| NW_021161567.1 | 53 |
| NW_021161570.1 | 1 |
| NW_021161582.1 | 1100 |
| NW_021161585.1 | 1484 |
| NW_021161590.1 | 1497 |
| NW_021161593.1 | 1140 |
| NW_021161596.1 | 4588 |
| NW_021161601.1 | 201 |
| NW_021161608.1 | 52 |
| NW_021161609.1 | 27 |
| NW_021161614.1 | 166 |
| NW_021161616.1 | 119 |
| NW_021161617.1 | 6 |
| NW_021161627.1 | 264 |
| NW_021161633.1 | 1491 |
| NW_021161642.1 | 127 |
| NW_021161648.1 | 4062 |
| NW_021161679.1 | 339 |
| NW_021161680.1 | 150 |
| NW_021161686.1 | 947 |
| NW_021161694.1 | 120 |
| NW_021161695.1 | 183 |
| NW_021161696.1 | 99 |
| NW_021161699.1 | 483 |
| NW_021161700.1 | 21 |
| NW_021161713.1 | 26 |
| NW_021161715.1 | 17 |
| NW_021161718.1 | 1277 |
| NW_021161725.1 | 654 |
| NW_021161737.1 | 164 |
| NW_021161743.1 | 80 |
| NW_021161747.1 | 31 |
| NW_021161754.1 | 1054 |
| NW_021161759.1 | 24 |
| NW_021161767.1 | 1190 |
| NW_021161769.1 | 177 |
| NW_021161772.1 | 216 |
| NW_021161784.1 | 61 |
| NW_021161790.1 | 1037 |
| NW_021161794.1 | 26 |
| NW_021161796.1 | 82 |
| NW_021161798.1 | 141 |
| NW_021161830.1 | 318 |
| NW_021161832.1 | 132 |
| NW_021161839.1 | 192 |
| NW_021161842.1 | 332 |
| NW_021161843.1 | 253 |
| NW_021161845.1 | 1268 |
| NW_021161850.1 | 17079 |
| NW_021161853.1 | 1187 |
| NW_021161857.1 | 578 |
| NW_021161862.1 | 48 |
| NW_021161876.1 | 396 |
| NW_021161878.1 | 396 |
| NW_021161881.1 | 565 |
| NW_021161888.1 | 1017 |
| NW_021161902.1 | 899 |
| NW_021161927.1 | 436 |
| NW_021161934.1 | 544 |
| NW_021161939.1 | 1509 |
| NW_021161954.1 | 589 |
| NW_021161955.1 | 275 |
| NW_021161956.1 | 1764 |
| NW_021161958.1 | 661 |
| NW_021161961.1 | 593 |
| NW_021161962.1 | 118 |
| NW_021161965.1 | 775 |
| NW_021161996.1 | 368 |
| NW_021162004.1 | 64 |
| NW_021162007.1 | 305 |
| NW_021162009.1 | 4708 |
| NW_021162025.1 | 629 |
| NW_021162035.1 | 98 |
| NW_021162047.1 | 306 |
| NW_021162055.1 | 1104 |
| NW_021162083.1 | 750 |
| NW_021162091.1 | 1997 |
| NW_021162100.1 | 4640 |
| NW_021162108.1 | 1687 |
| NW_021162157.1 | 190 |
| NW_021162208.1 | 34 |
| NW_021162222.1 | 10 |
| NW_021162226.1 | 71 |
| NW_021162246.1 | 2362 |
| NW_021162251.1 | 2815 |
| NW_021162253.1 | 10 |
| NW_021162263.1 | 12 |
| NW_021162265.1 | 1010 |
| NW_021162274.1 | 3407 |
| NW_021162277.1 | 206 |
| NW_021162460.1 | 5 |
| NW_021162463.1 | 25 |
| NW_021162495.1 | 32 |
| NW_021162553.1 | 34 |
| NW_021162593.1 | 9 |
| NW_021162599.1 | 496 |
| NW_021162621.1 | 46 |
| NW_021162643.1 | 936 |
| NW_021162814.1 | 17 |
| NW_021162871.1 | 139 |
| NW_021163002.1 | 1 |
Fragment lengths
| fragments | min | max | mean | median | |
|---|---|---|---|---|---|
| fragments | 123634194 | 1 | 5038 | 162.81 | 155 |
×
Files
| Filename | Size | md5 |
|---|---|---|
| 86af4e5bdd31f92b8a1e2d7cc3d65c513b954d91.gz | 1.2 GB | 9197162c1e01e48ff737f88c5e1cc38f |
| 86af4e5bdd31f92b8a1e2d7cc3d65c513b954d91.gz.tbi | 856.66 KB | 379b18bfa94afdc33ab7d62432fde25a |
| fragment_count_dist_plot.py | 853.0 B | 9d735ee8c687286d50484e7f1e398e60 |
| genomic_resource.yaml | 1.5 KB | 959910c32192b4e5117c093abf37546b |
| statistics/ |