Resource
| Id | summary/johansen2025Crossspecies/atac_fragments/macaque/990e8143345a648b1f163b3de552db329db9ac9d |
|---|---|
| Type | fragment_score |
| Version | 0 |
| Summary | ATAC fragments for macaque from library 990e8143345a648b1f163b3de552db329db9ac9d |
| Description | |
| Labels |
|
Scores (2)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| cell | str |
cell |
 |
AGGTTGCGTTGGTGAC-1, GTACTTAAGCATCCAG-1, ATGTAAGCAATAACCT-1, ACCCGGTAGTAGCCAT-1, TGAAGTGAGGCGAATA-1 (top 5 of 8190 values) | ||
| count | int |
count |
 |
[1, 1] |
|
n counts fragments; sd is the population standard deviation.
Fragments
| Chromosome | Fragments |
|---|---|
| all chromosomes | 287696094 |
| NC_005943.1 | 330 |
| NC_027914.1 | 219982 |
| NC_041754.1 | 26003902 |
| NC_041755.1 | 18148400 |
| NC_041756.1 | 18534899 |
| NC_041757.1 | 15618289 |
| NC_041758.1 | 13419825 |
| NC_041759.1 | 15155749 |
| NC_041760.1 | 19308344 |
| NC_041761.1 | 12822660 |
| NC_041762.1 | 13531896 |
| NC_041763.1 | 14409426 |
| NC_041764.1 | 14214895 |
| NC_041765.1 | 10929239 |
| NC_041766.1 | 11025610 |
| NC_041767.1 | 15459350 |
| NC_041768.1 | 11714239 |
| NC_041769.1 | 13270644 |
| NC_041770.1 | 7535440 |
| NC_041771.1 | 6233031 |
| NC_041772.1 | 11512486 |
| NC_041773.1 | 11989215 |
| NC_041774.1 | 5868487 |
| NW_021160097.1 | 40 |
| NW_021160098.1 | 178 |
| NW_021160099.1 | 70 |
| NW_021160102.1 | 362 |
| NW_021160105.1 | 152 |
| NW_021160106.1 | 990 |
| NW_021160107.1 | 154 |
| NW_021160109.1 | 1863 |
| NW_021160110.1 | 7343 |
| NW_021160111.1 | 1586 |
| NW_021160113.1 | 22430 |
| NW_021160114.1 | 2948 |
| NW_021160116.1 | 76 |
| NW_021160121.1 | 523 |
| NW_021160122.1 | 515 |
| NW_021160123.1 | 625 |
| NW_021160125.1 | 23 |
| NW_021160136.1 | 465 |
| NW_021160140.1 | 929 |
| NW_021160141.1 | 1250 |
| NW_021160142.1 | 3466 |
| NW_021160144.1 | 12339 |
| NW_021160145.1 | 174 |
| NW_021160147.1 | 144 |
| NW_021160148.1 | 989 |
| NW_021160150.1 | 3006 |
| NW_021160155.1 | 545 |
| NW_021160158.1 | 541 |
| NW_021160159.1 | 801 |
| NW_021160161.1 | 20240 |
| NW_021160167.1 | 76 |
| NW_021160168.1 | 51 |
| NW_021160175.1 | 7556 |
| NW_021160179.1 | 257 |
| NW_021160182.1 | 2330 |
| NW_021160184.1 | 188 |
| NW_021160185.1 | 522 |
| NW_021160186.1 | 1218 |
| NW_021160187.1 | 163 |
| NW_021160188.1 | 520 |
| NW_021160189.1 | 391 |
| NW_021160190.1 | 381 |
| NW_021160191.1 | 267 |
| NW_021160193.1 | 44 |
| NW_021160196.1 | 1680 |
| NW_021160197.1 | 518 |
| NW_021160199.1 | 302 |
| NW_021160200.1 | 226 |
| NW_021160201.1 | 1310 |
| NW_021160202.1 | 728 |
| NW_021160203.1 | 619 |
| NW_021160204.1 | 607 |
| NW_021160205.1 | 178 |
| NW_021160206.1 | 830 |
| NW_021160207.1 | 442 |
| NW_021160209.1 | 2941 |
| NW_021160211.1 | 957 |
| NW_021160220.1 | 2707 |
| NW_021160221.1 | 622 |
| NW_021160222.1 | 142 |
| NW_021160223.1 | 4886 |
| NW_021160225.1 | 1208 |
| NW_021160226.1 | 758 |
| NW_021160228.1 | 314 |
| NW_021160229.1 | 977 |
| NW_021160231.1 | 415 |
| NW_021160233.1 | 955 |
| NW_021160234.1 | 8568 |
| NW_021160236.1 | 1206 |
| NW_021160237.1 | 5934 |
| NW_021160238.1 | 7642 |
| NW_021160239.1 | 290 |
| NW_021160242.1 | 386 |
| NW_021160243.1 | 50 |
| NW_021160244.1 | 10715 |
| NW_021160245.1 | 138 |
| NW_021160248.1 | 199 |
| NW_021160249.1 | 874 |
| NW_021160250.1 | 389 |
| NW_021160251.1 | 860 |
| NW_021160252.1 | 2505 |
| NW_021160255.1 | 340 |
| NW_021160263.1 | 215 |
| NW_021160266.1 | 146 |
| NW_021160268.1 | 224 |
| NW_021160270.1 | 694 |
| NW_021160271.1 | 513 |
| NW_021160272.1 | 1406 |
| NW_021160273.1 | 162 |
| NW_021160277.1 | 92 |
| NW_021160278.1 | 613 |
| NW_021160279.1 | 1032 |
| NW_021160282.1 | 3828 |
| NW_021160284.1 | 257 |
| NW_021160285.1 | 355 |
| NW_021160291.1 | 62 |
| NW_021160293.1 | 2077 |
| NW_021160294.1 | 913 |
| NW_021160295.1 | 518 |
| NW_021160297.1 | 810 |
| NW_021160298.1 | 382 |
| NW_021160300.1 | 1919 |
| NW_021160305.1 | 102 |
| NW_021160306.1 | 310 |
| NW_021160307.1 | 724 |
| NW_021160308.1 | 309 |
| NW_021160310.1 | 6146 |
| NW_021160311.1 | 2314 |
| NW_021160312.1 | 2770 |
| NW_021160313.1 | 1293 |
| NW_021160319.1 | 434 |
| NW_021160320.1 | 879 |
| NW_021160324.1 | 1272 |
| NW_021160325.1 | 602 |
| NW_021160326.1 | 350 |
| NW_021160327.1 | 1564 |
| NW_021160328.1 | 6305 |
| NW_021160329.1 | 702 |
| NW_021160338.1 | 107 |
| NW_021160339.1 | 46 |
| NW_021160341.1 | 242 |
| NW_021160347.1 | 1720 |
| NW_021160353.1 | 524 |
| NW_021160354.1 | 227 |
| NW_021160355.1 | 557 |
| NW_021160356.1 | 505 |
| NW_021160357.1 | 180 |
| NW_021160358.1 | 607 |
| NW_021160359.1 | 1144 |
| NW_021160361.1 | 103 |
| NW_021160362.1 | 192 |
| NW_021160363.1 | 766 |
| NW_021160364.1 | 1045 |
| NW_021160365.1 | 856 |
| NW_021160366.1 | 1092 |
| NW_021160367.1 | 4041 |
| NW_021160368.1 | 144 |
| NW_021160369.1 | 222 |
| NW_021160370.1 | 1817 |
| NW_021160371.1 | 545 |
| NW_021160372.1 | 5010 |
| NW_021160373.1 | 1868 |
| NW_021160374.1 | 1189 |
| NW_021160375.1 | 4164 |
| NW_021160376.1 | 7514 |
| NW_021160381.1 | 93 |
| NW_021160383.1 | 2393 |
| NW_021160384.1 | 230 |
| NW_021160401.1 | 114 |
| NW_021160410.1 | 3683 |
| NW_021160417.1 | 244 |
| NW_021160452.1 | 221 |
| NW_021160482.1 | 33 |
| NW_021160484.1 | 316 |
| NW_021160495.1 | 24148 |
| NW_021160514.1 | 89 |
| NW_021160523.1 | 149 |
| NW_021160525.1 | 72 |
| NW_021160535.1 | 360 |
| NW_021160549.1 | 682 |
| NW_021160573.1 | 960 |
| NW_021160589.1 | 1 |
| NW_021160606.1 | 21208 |
| NW_021160623.1 | 116 |
| NW_021160625.1 | 7 |
| NW_021160629.1 | 10 |
| NW_021160635.1 | 17 |
| NW_021160655.1 | 278 |
| NW_021160656.1 | 336 |
| NW_021160678.1 | 22 |
| NW_021160682.1 | 1985 |
| NW_021160688.1 | 919 |
| NW_021160701.1 | 1250 |
| NW_021160725.1 | 42 |
| NW_021160726.1 | 21264 |
| NW_021160734.1 | 46 |
| NW_021160757.1 | 3 |
| NW_021160770.1 | 27076 |
| NW_021160772.1 | 208 |
| NW_021160805.1 | 896 |
| NW_021160821.1 | 32 |
| NW_021160827.1 | 18064 |
| NW_021160832.1 | 5 |
| NW_021160834.1 | 85 |
| NW_021160835.1 | 1 |
| NW_021160848.1 | 7 |
| NW_021160868.1 | 7 |
| NW_021160890.1 | 53 |
| NW_021160903.1 | 539 |
| NW_021160919.1 | 297 |
| NW_021160925.1 | 33 |
| NW_021160946.1 | 1037 |
| NW_021160955.1 | 124 |
| NW_021160961.1 | 32 |
| NW_021160976.1 | 419 |
| NW_021160983.1 | 15 |
| NW_021160986.1 | 2 |
| NW_021161026.1 | 9 |
| NW_021161033.1 | 5 |
| NW_021161038.1 | 313 |
| NW_021161041.1 | 209 |
| NW_021161043.1 | 32 |
| NW_021161046.1 | 691 |
| NW_021161062.1 | 9 |
| NW_021161066.1 | 1204 |
| NW_021161106.1 | 453 |
| NW_021161107.1 | 98 |
| NW_021161113.1 | 413 |
| NW_021161114.1 | 509 |
| NW_021161131.1 | 4 |
| NW_021161133.1 | 452 |
| NW_021161138.1 | 10 |
| NW_021161152.1 | 227 |
| NW_021161164.1 | 397 |
| NW_021161166.1 | 831 |
| NW_021161184.1 | 291 |
| NW_021161201.1 | 249 |
| NW_021161211.1 | 181 |
| NW_021161213.1 | 47 |
| NW_021161224.1 | 1616 |
| NW_021161226.1 | 614 |
| NW_021161241.1 | 17 |
| NW_021161247.1 | 9 |
| NW_021161253.1 | 28 |
| NW_021161261.1 | 15 |
| NW_021161269.1 | 461 |
| NW_021161274.1 | 10 |
| NW_021161282.1 | 4510 |
| NW_021161303.1 | 42 |
| NW_021161305.1 | 9 |
| NW_021161307.1 | 66 |
| NW_021161312.1 | 24 |
| NW_021161320.1 | 808 |
| NW_021161336.1 | 668 |
| NW_021161338.1 | 43 |
| NW_021161340.1 | 231 |
| NW_021161348.1 | 246 |
| NW_021161355.1 | 419 |
| NW_021161360.1 | 171 |
| NW_021161364.1 | 306 |
| NW_021161377.1 | 1999 |
| NW_021161379.1 | 8 |
| NW_021161380.1 | 8 |
| NW_021161385.1 | 65 |
| NW_021161392.1 | 12649 |
| NW_021161394.1 | 478 |
| NW_021161396.1 | 14 |
| NW_021161399.1 | 391 |
| NW_021161404.1 | 7 |
| NW_021161413.1 | 37 |
| NW_021161421.1 | 72 |
| NW_021161422.1 | 174 |
| NW_021161427.1 | 370 |
| NW_021161433.1 | 42 |
| NW_021161437.1 | 32 |
| NW_021161446.1 | 48 |
| NW_021161463.1 | 5 |
| NW_021161468.1 | 160 |
| NW_021161470.1 | 42 |
| NW_021161483.1 | 7 |
| NW_021161486.1 | 888 |
| NW_021161494.1 | 44 |
| NW_021161497.1 | 25 |
| NW_021161505.1 | 1297 |
| NW_021161507.1 | 459 |
| NW_021161508.1 | 1117 |
| NW_021161519.1 | 232 |
| NW_021161520.1 | 2625 |
| NW_021161523.1 | 129 |
| NW_021161525.1 | 1677 |
| NW_021161526.1 | 1262 |
| NW_021161532.1 | 90 |
| NW_021161535.1 | 59 |
| NW_021161537.1 | 6847 |
| NW_021161545.1 | 17401 |
| NW_021161552.1 | 41 |
| NW_021161554.1 | 467 |
| NW_021161561.1 | 635 |
| NW_021161562.1 | 1233 |
| NW_021161567.1 | 144 |
| NW_021161570.1 | 86 |
| NW_021161582.1 | 1510 |
| NW_021161585.1 | 3101 |
| NW_021161590.1 | 4912 |
| NW_021161593.1 | 3153 |
| NW_021161596.1 | 13061 |
| NW_021161601.1 | 749 |
| NW_021161608.1 | 224 |
| NW_021161609.1 | 57 |
| NW_021161614.1 | 103 |
| NW_021161616.1 | 13150 |
| NW_021161617.1 | 14 |
| NW_021161627.1 | 535 |
| NW_021161633.1 | 4618 |
| NW_021161642.1 | 551 |
| NW_021161648.1 | 8316 |
| NW_021161679.1 | 505 |
| NW_021161680.1 | 286 |
| NW_021161686.1 | 4389 |
| NW_021161694.1 | 289 |
| NW_021161695.1 | 442 |
| NW_021161696.1 | 200 |
| NW_021161699.1 | 2276 |
| NW_021161700.1 | 22 |
| NW_021161713.1 | 57 |
| NW_021161715.1 | 67 |
| NW_021161718.1 | 1224 |
| NW_021161725.1 | 65 |
| NW_021161737.1 | 734 |
| NW_021161743.1 | 389 |
| NW_021161747.1 | 51 |
| NW_021161754.1 | 3675 |
| NW_021161759.1 | 30 |
| NW_021161767.1 | 175 |
| NW_021161769.1 | 293 |
| NW_021161772.1 | 360 |
| NW_021161784.1 | 115 |
| NW_021161790.1 | 2180 |
| NW_021161794.1 | 80 |
| NW_021161796.1 | 83 |
| NW_021161798.1 | 964 |
| NW_021161830.1 | 310 |
| NW_021161832.1 | 182 |
| NW_021161839.1 | 516 |
| NW_021161842.1 | 342 |
| NW_021161843.1 | 470 |
| NW_021161845.1 | 2882 |
| NW_021161850.1 | 180125 |
| NW_021161853.1 | 1253 |
| NW_021161857.1 | 519 |
| NW_021161862.1 | 233 |
| NW_021161876.1 | 1404 |
| NW_021161878.1 | 1816 |
| NW_021161881.1 | 687 |
| NW_021161888.1 | 2895 |
| NW_021161902.1 | 2104 |
| NW_021161927.1 | 153 |
| NW_021161934.1 | 725 |
| NW_021161939.1 | 4025 |
| NW_021161954.1 | 807 |
| NW_021161955.1 | 235 |
| NW_021161956.1 | 1768 |
| NW_021161958.1 | 1573 |
| NW_021161961.1 | 549 |
| NW_021161962.1 | 90 |
| NW_021161965.1 | 369 |
| NW_021161996.1 | 141 |
| NW_021162004.1 | 142 |
| NW_021162007.1 | 540 |
| NW_021162009.1 | 9622 |
| NW_021162025.1 | 1081 |
| NW_021162035.1 | 61 |
| NW_021162047.1 | 375 |
| NW_021162055.1 | 1896 |
| NW_021162083.1 | 856 |
| NW_021162091.1 | 5687 |
| NW_021162100.1 | 3391 |
| NW_021162108.1 | 2397 |
| NW_021162157.1 | 234 |
| NW_021162185.1 | 1 |
| NW_021162208.1 | 192 |
| NW_021162222.1 | 77 |
| NW_021162226.1 | 179 |
| NW_021162246.1 | 3572 |
| NW_021162251.1 | 3901 |
| NW_021162253.1 | 9 |
| NW_021162263.1 | 19 |
| NW_021162265.1 | 1017 |
| NW_021162274.1 | 8119 |
| NW_021162277.1 | 163 |
| NW_021162460.1 | 3 |
| NW_021162463.1 | 575 |
| NW_021162495.1 | 57 |
| NW_021162553.1 | 4 |
| NW_021162593.1 | 15 |
| NW_021162599.1 | 1393 |
| NW_021162621.1 | 101 |
| NW_021162643.1 | 2355 |
| NW_021162814.1 | 32 |
| NW_021162871.1 | 102 |
| NW_021162949.1 | 1 |
| NW_021163002.1 | 3 |
Fragment lengths
| fragments | min | max | mean | median | |
|---|---|---|---|---|---|
| fragments | 287696094 | 1 | 5042 | 180.38 | 156 |
×
Files
| Filename | Size | md5 |
|---|---|---|
| 990e8143345a648b1f163b3de552db329db9ac9d.gz | 2.69 GB | b25f3a2a2054020011f9180ac96f3a6e |
| 990e8143345a648b1f163b3de552db329db9ac9d.gz.tbi | 1.19 MB | cb1f4c771fe2c94d5c76453caf849028 |
| fragment_count_dist_plot.py | 853.0 B | 9d735ee8c687286d50484e7f1e398e60 |
| genomic_resource.yaml | 1.5 KB | 42e3b35006eea6e5d5f644a52f64df3c |
| statistics/ |