Resource
| Id | summary/johansen2025Crossspecies/atac_fragments/macaque/9efddd88c260b011f80aaec9806d4f7db5b5f156 |
|---|---|
| Type | fragment_score |
| Version | 0 |
| Summary | ATAC fragments for macaque from library 9efddd88c260b011f80aaec9806d4f7db5b5f156 |
| Description | |
| Labels |
|
Scores (2)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| cell | str |
cell |
 |
ATGCAAACAACTCGCG-1, TTTGCGACAATTTAGC-1, CGCAATGTCAGGAACA-1, GCCTGACAGGAATAAC-1, TAGTAGGAGGAGTCTT-1 (top 5 of 10308 values) | ||
| count | int |
count |
 |
[1, 1] |
|
n counts fragments; sd is the population standard deviation.
Fragments
| Chromosome | Fragments |
|---|---|
| all chromosomes | 352798502 |
| NC_005943.1 | 822 |
| NC_027914.1 | 320169 |
| NC_041754.1 | 31176576 |
| NC_041755.1 | 22556173 |
| NC_041756.1 | 22949445 |
| NC_041757.1 | 19463637 |
| NC_041758.1 | 17445542 |
| NC_041759.1 | 19081545 |
| NC_041760.1 | 23234872 |
| NC_041761.1 | 16225304 |
| NC_041762.1 | 16707786 |
| NC_041763.1 | 16990931 |
| NC_041764.1 | 17319159 |
| NC_041765.1 | 13891905 |
| NC_041766.1 | 13613445 |
| NC_041767.1 | 18387243 |
| NC_041768.1 | 14247658 |
| NC_041769.1 | 15208601 |
| NC_041770.1 | 9625621 |
| NC_041771.1 | 7875103 |
| NC_041772.1 | 13459246 |
| NC_041773.1 | 14172966 |
| NC_041774.1 | 7658065 |
| NW_021160097.1 | 31 |
| NW_021160098.1 | 240 |
| NW_021160099.1 | 90 |
| NW_021160102.1 | 446 |
| NW_021160105.1 | 236 |
| NW_021160106.1 | 1203 |
| NW_021160107.1 | 264 |
| NW_021160109.1 | 2187 |
| NW_021160110.1 | 8661 |
| NW_021160111.1 | 2605 |
| NW_021160113.1 | 22806 |
| NW_021160114.1 | 3368 |
| NW_021160116.1 | 119 |
| NW_021160121.1 | 696 |
| NW_021160122.1 | 637 |
| NW_021160123.1 | 673 |
| NW_021160125.1 | 19 |
| NW_021160136.1 | 573 |
| NW_021160140.1 | 1015 |
| NW_021160141.1 | 1606 |
| NW_021160142.1 | 3979 |
| NW_021160144.1 | 26489 |
| NW_021160145.1 | 211 |
| NW_021160147.1 | 244 |
| NW_021160148.1 | 1082 |
| NW_021160150.1 | 3464 |
| NW_021160155.1 | 555 |
| NW_021160158.1 | 538 |
| NW_021160159.1 | 1216 |
| NW_021160161.1 | 26679 |
| NW_021160167.1 | 111 |
| NW_021160168.1 | 89 |
| NW_021160175.1 | 13350 |
| NW_021160179.1 | 385 |
| NW_021160182.1 | 2623 |
| NW_021160184.1 | 232 |
| NW_021160185.1 | 642 |
| NW_021160186.1 | 1351 |
| NW_021160187.1 | 273 |
| NW_021160188.1 | 737 |
| NW_021160189.1 | 586 |
| NW_021160190.1 | 471 |
| NW_021160191.1 | 330 |
| NW_021160193.1 | 60 |
| NW_021160196.1 | 2221 |
| NW_021160197.1 | 646 |
| NW_021160199.1 | 457 |
| NW_021160200.1 | 246 |
| NW_021160201.1 | 1453 |
| NW_021160202.1 | 1010 |
| NW_021160203.1 | 900 |
| NW_021160204.1 | 776 |
| NW_021160205.1 | 233 |
| NW_021160206.1 | 894 |
| NW_021160207.1 | 566 |
| NW_021160209.1 | 5456 |
| NW_021160211.1 | 1855 |
| NW_021160220.1 | 3095 |
| NW_021160221.1 | 1133 |
| NW_021160222.1 | 323 |
| NW_021160223.1 | 5535 |
| NW_021160225.1 | 1714 |
| NW_021160226.1 | 997 |
| NW_021160228.1 | 396 |
| NW_021160229.1 | 1572 |
| NW_021160231.1 | 568 |
| NW_021160233.1 | 1050 |
| NW_021160234.1 | 9230 |
| NW_021160236.1 | 1814 |
| NW_021160237.1 | 7980 |
| NW_021160238.1 | 9381 |
| NW_021160239.1 | 448 |
| NW_021160242.1 | 437 |
| NW_021160243.1 | 69 |
| NW_021160244.1 | 10724 |
| NW_021160245.1 | 155 |
| NW_021160248.1 | 269 |
| NW_021160249.1 | 957 |
| NW_021160250.1 | 810 |
| NW_021160251.1 | 1010 |
| NW_021160252.1 | 3021 |
| NW_021160255.1 | 406 |
| NW_021160263.1 | 343 |
| NW_021160266.1 | 201 |
| NW_021160268.1 | 371 |
| NW_021160270.1 | 948 |
| NW_021160271.1 | 595 |
| NW_021160272.1 | 1629 |
| NW_021160273.1 | 251 |
| NW_021160277.1 | 128 |
| NW_021160278.1 | 670 |
| NW_021160279.1 | 1261 |
| NW_021160282.1 | 4169 |
| NW_021160284.1 | 410 |
| NW_021160285.1 | 296 |
| NW_021160291.1 | 116 |
| NW_021160293.1 | 2707 |
| NW_021160294.1 | 1245 |
| NW_021160295.1 | 744 |
| NW_021160297.1 | 958 |
| NW_021160298.1 | 536 |
| NW_021160300.1 | 2068 |
| NW_021160305.1 | 102 |
| NW_021160306.1 | 367 |
| NW_021160307.1 | 863 |
| NW_021160308.1 | 416 |
| NW_021160310.1 | 7029 |
| NW_021160311.1 | 2504 |
| NW_021160312.1 | 2690 |
| NW_021160313.1 | 1738 |
| NW_021160319.1 | 546 |
| NW_021160320.1 | 991 |
| NW_021160324.1 | 1659 |
| NW_021160325.1 | 806 |
| NW_021160326.1 | 429 |
| NW_021160327.1 | 1509 |
| NW_021160328.1 | 6387 |
| NW_021160329.1 | 865 |
| NW_021160338.1 | 177 |
| NW_021160339.1 | 157 |
| NW_021160341.1 | 327 |
| NW_021160347.1 | 2079 |
| NW_021160353.1 | 691 |
| NW_021160354.1 | 180 |
| NW_021160355.1 | 603 |
| NW_021160356.1 | 627 |
| NW_021160357.1 | 184 |
| NW_021160358.1 | 690 |
| NW_021160359.1 | 1311 |
| NW_021160361.1 | 125 |
| NW_021160362.1 | 275 |
| NW_021160363.1 | 916 |
| NW_021160364.1 | 1321 |
| NW_021160365.1 | 1119 |
| NW_021160366.1 | 1447 |
| NW_021160367.1 | 4558 |
| NW_021160368.1 | 209 |
| NW_021160369.1 | 363 |
| NW_021160370.1 | 2217 |
| NW_021160371.1 | 700 |
| NW_021160372.1 | 6496 |
| NW_021160373.1 | 2337 |
| NW_021160374.1 | 1451 |
| NW_021160375.1 | 6479 |
| NW_021160376.1 | 14519 |
| NW_021160381.1 | 111 |
| NW_021160383.1 | 3508 |
| NW_021160384.1 | 288 |
| NW_021160401.1 | 230 |
| NW_021160410.1 | 4666 |
| NW_021160417.1 | 491 |
| NW_021160452.1 | 247 |
| NW_021160482.1 | 38 |
| NW_021160484.1 | 626 |
| NW_021160495.1 | 49181 |
| NW_021160514.1 | 111 |
| NW_021160523.1 | 208 |
| NW_021160525.1 | 168 |
| NW_021160535.1 | 795 |
| NW_021160549.1 | 731 |
| NW_021160573.1 | 1574 |
| NW_021160589.1 | 4 |
| NW_021160606.1 | 37908 |
| NW_021160623.1 | 140 |
| NW_021160625.1 | 9 |
| NW_021160629.1 | 25 |
| NW_021160635.1 | 29 |
| NW_021160655.1 | 440 |
| NW_021160656.1 | 590 |
| NW_021160678.1 | 20 |
| NW_021160682.1 | 2503 |
| NW_021160688.1 | 937 |
| NW_021160701.1 | 1976 |
| NW_021160725.1 | 74 |
| NW_021160726.1 | 37016 |
| NW_021160734.1 | 74 |
| NW_021160757.1 | 3 |
| NW_021160770.1 | 45609 |
| NW_021160772.1 | 275 |
| NW_021160805.1 | 1056 |
| NW_021160821.1 | 42 |
| NW_021160827.1 | 23503 |
| NW_021160832.1 | 13 |
| NW_021160834.1 | 143 |
| NW_021160835.1 | 1 |
| NW_021160848.1 | 34 |
| NW_021160868.1 | 4 |
| NW_021160890.1 | 119 |
| NW_021160903.1 | 713 |
| NW_021160919.1 | 342 |
| NW_021160925.1 | 63 |
| NW_021160946.1 | 1213 |
| NW_021160955.1 | 193 |
| NW_021160961.1 | 46 |
| NW_021160976.1 | 522 |
| NW_021160983.1 | 35 |
| NW_021160986.1 | 12 |
| NW_021161026.1 | 15 |
| NW_021161033.1 | 6 |
| NW_021161038.1 | 410 |
| NW_021161041.1 | 281 |
| NW_021161043.1 | 48 |
| NW_021161046.1 | 1566 |
| NW_021161062.1 | 15 |
| NW_021161066.1 | 1461 |
| NW_021161106.1 | 988 |
| NW_021161107.1 | 190 |
| NW_021161113.1 | 653 |
| NW_021161114.1 | 808 |
| NW_021161131.1 | 11 |
| NW_021161133.1 | 948 |
| NW_021161138.1 | 24 |
| NW_021161152.1 | 253 |
| NW_021161164.1 | 777 |
| NW_021161166.1 | 987 |
| NW_021161184.1 | 334 |
| NW_021161201.1 | 331 |
| NW_021161211.1 | 301 |
| NW_021161213.1 | 121 |
| NW_021161224.1 | 2437 |
| NW_021161226.1 | 1285 |
| NW_021161241.1 | 24 |
| NW_021161247.1 | 21 |
| NW_021161253.1 | 58 |
| NW_021161261.1 | 29 |
| NW_021161269.1 | 616 |
| NW_021161274.1 | 14 |
| NW_021161282.1 | 4687 |
| NW_021161303.1 | 66 |
| NW_021161305.1 | 23 |
| NW_021161307.1 | 99 |
| NW_021161312.1 | 57 |
| NW_021161320.1 | 1302 |
| NW_021161336.1 | 959 |
| NW_021161338.1 | 88 |
| NW_021161340.1 | 265 |
| NW_021161348.1 | 327 |
| NW_021161355.1 | 734 |
| NW_021161360.1 | 444 |
| NW_021161364.1 | 519 |
| NW_021161377.1 | 3557 |
| NW_021161379.1 | 17 |
| NW_021161380.1 | 24 |
| NW_021161385.1 | 120 |
| NW_021161392.1 | 14514 |
| NW_021161394.1 | 610 |
| NW_021161396.1 | 43 |
| NW_021161399.1 | 507 |
| NW_021161404.1 | 10 |
| NW_021161413.1 | 62 |
| NW_021161421.1 | 142 |
| NW_021161422.1 | 164 |
| NW_021161427.1 | 469 |
| NW_021161433.1 | 89 |
| NW_021161437.1 | 80 |
| NW_021161446.1 | 65 |
| NW_021161463.1 | 11 |
| NW_021161468.1 | 255 |
| NW_021161470.1 | 49 |
| NW_021161483.1 | 2 |
| NW_021161486.1 | 1485 |
| NW_021161494.1 | 53 |
| NW_021161497.1 | 47 |
| NW_021161505.1 | 1606 |
| NW_021161507.1 | 785 |
| NW_021161508.1 | 1349 |
| NW_021161519.1 | 353 |
| NW_021161520.1 | 3045 |
| NW_021161523.1 | 232 |
| NW_021161525.1 | 1906 |
| NW_021161526.1 | 1410 |
| NW_021161532.1 | 181 |
| NW_021161535.1 | 122 |
| NW_021161537.1 | 11983 |
| NW_021161545.1 | 24366 |
| NW_021161552.1 | 105 |
| NW_021161554.1 | 568 |
| NW_021161561.1 | 869 |
| NW_021161562.1 | 2512 |
| NW_021161567.1 | 242 |
| NW_021161570.1 | 251 |
| NW_021161582.1 | 1828 |
| NW_021161585.1 | 3079 |
| NW_021161590.1 | 8823 |
| NW_021161593.1 | 5795 |
| NW_021161596.1 | 19516 |
| NW_021161601.1 | 1412 |
| NW_021161608.1 | 277 |
| NW_021161609.1 | 121 |
| NW_021161614.1 | 134 |
| NW_021161616.1 | 30710 |
| NW_021161617.1 | 38 |
| NW_021161627.1 | 629 |
| NW_021161633.1 | 6024 |
| NW_021161642.1 | 692 |
| NW_021161648.1 | 11161 |
| NW_021161679.1 | 589 |
| NW_021161680.1 | 470 |
| NW_021161686.1 | 8871 |
| NW_021161694.1 | 467 |
| NW_021161695.1 | 834 |
| NW_021161696.1 | 377 |
| NW_021161699.1 | 3005 |
| NW_021161700.1 | 22 |
| NW_021161713.1 | 119 |
| NW_021161715.1 | 113 |
| NW_021161718.1 | 1833 |
| NW_021161725.1 | 124 |
| NW_021161737.1 | 944 |
| NW_021161743.1 | 664 |
| NW_021161747.1 | 53 |
| NW_021161754.1 | 3891 |
| NW_021161759.1 | 70 |
| NW_021161767.1 | 211 |
| NW_021161769.1 | 506 |
| NW_021161772.1 | 609 |
| NW_021161784.1 | 110 |
| NW_021161790.1 | 2616 |
| NW_021161794.1 | 158 |
| NW_021161796.1 | 88 |
| NW_021161798.1 | 2151 |
| NW_021161830.1 | 674 |
| NW_021161832.1 | 417 |
| NW_021161839.1 | 643 |
| NW_021161842.1 | 634 |
| NW_021161843.1 | 716 |
| NW_021161845.1 | 4195 |
| NW_021161850.1 | 334184 |
| NW_021161853.1 | 2405 |
| NW_021161857.1 | 848 |
| NW_021161862.1 | 292 |
| NW_021161876.1 | 2138 |
| NW_021161878.1 | 3308 |
| NW_021161881.1 | 976 |
| NW_021161888.1 | 3934 |
| NW_021161902.1 | 2254 |
| NW_021161927.1 | 198 |
| NW_021161934.1 | 1042 |
| NW_021161939.1 | 5095 |
| NW_021161954.1 | 1219 |
| NW_021161955.1 | 341 |
| NW_021161956.1 | 2751 |
| NW_021161958.1 | 2214 |
| NW_021161961.1 | 628 |
| NW_021161962.1 | 138 |
| NW_021161965.1 | 483 |
| NW_021161996.1 | 186 |
| NW_021162004.1 | 166 |
| NW_021162007.1 | 968 |
| NW_021162009.1 | 12422 |
| NW_021162025.1 | 1967 |
| NW_021162035.1 | 136 |
| NW_021162047.1 | 626 |
| NW_021162055.1 | 3362 |
| NW_021162083.1 | 1415 |
| NW_021162091.1 | 8440 |
| NW_021162100.1 | 5659 |
| NW_021162108.1 | 2335 |
| NW_021162157.1 | 477 |
| NW_021162185.1 | 3 |
| NW_021162208.1 | 594 |
| NW_021162222.1 | 171 |
| NW_021162226.1 | 375 |
| NW_021162246.1 | 4575 |
| NW_021162251.1 | 4722 |
| NW_021162253.1 | 17 |
| NW_021162263.1 | 15 |
| NW_021162265.1 | 1227 |
| NW_021162274.1 | 8811 |
| NW_021162277.1 | 240 |
| NW_021162460.1 | 2 |
| NW_021162463.1 | 818 |
| NW_021162495.1 | 55 |
| NW_021162553.1 | 1 |
| NW_021162593.1 | 24 |
| NW_021162599.1 | 1859 |
| NW_021162621.1 | 163 |
| NW_021162643.1 | 3216 |
| NW_021162814.1 | 42 |
| NW_021162871.1 | 145 |
| NW_021162949.1 | 6 |
| NW_021163002.1 | 2 |
Fragment lengths
| fragments | min | max | mean | median | |
|---|---|---|---|---|---|
| fragments | 352798502 | 1 | 5042 | 147.35 | 120 |
×
Files
| Filename | Size | md5 |
|---|---|---|
| 9efddd88c260b011f80aaec9806d4f7db5b5f156.gz | 3.3 GB | 53118dc23508af60eb23cac166bfebb8 |
| 9efddd88c260b011f80aaec9806d4f7db5b5f156.gz.tbi | 1.33 MB | 7a8560669ba534df456ba878e2769bf3 |
| fragment_count_dist_plot.py | 853.0 B | 9d735ee8c687286d50484e7f1e398e60 |
| genomic_resource.yaml | 1.5 KB | d60edbe9d080fd7bc4b2a9003993f6b0 |
| statistics/ |