Resource
| Id | summary/johansen2025Crossspecies/atac_fragments/macaque/a97266b89148b310e0778eba29c7d1b394162dac |
|---|---|
| Type | fragment_score |
| Version | 0 |
| Summary | ATAC fragments for macaque from library a97266b89148b310e0778eba29c7d1b394162dac |
| Description | |
| Labels |
|
Scores (2)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| cell | str |
cell |
 |
ATTAGCGGTTGAAGCC-1, GAGGCAAGTTTGAGGC-1, TTGTCCCAGTGACCTG-1, CGCGGATTCCAATTAG-1, GGTTGCATCTCCATGC-1 (top 5 of 5399 values) | ||
| count | int |
count |
 |
[1, 1] |
|
n counts fragments; sd is the population standard deviation.
Fragments
| Chromosome | Fragments |
|---|---|
| all chromosomes | 338624150 |
| NC_005943.1 | 13439 |
| NC_027914.1 | 306414 |
| NC_041754.1 | 30494123 |
| NC_041755.1 | 21390822 |
| NC_041756.1 | 21771840 |
| NC_041757.1 | 18339726 |
| NC_041758.1 | 16013688 |
| NC_041759.1 | 17983061 |
| NC_041760.1 | 22474276 |
| NC_041761.1 | 15127103 |
| NC_041762.1 | 15737139 |
| NC_041763.1 | 16737196 |
| NC_041764.1 | 16781842 |
| NC_041765.1 | 13097564 |
| NC_041766.1 | 12986123 |
| NC_041767.1 | 17973834 |
| NC_041768.1 | 13773943 |
| NC_041769.1 | 15485675 |
| NC_041770.1 | 9119574 |
| NC_041771.1 | 7430561 |
| NC_041772.1 | 13472850 |
| NC_041773.1 | 14271689 |
| NC_041774.1 | 7108485 |
| NW_021160097.1 | 53 |
| NW_021160098.1 | 522 |
| NW_021160099.1 | 123 |
| NW_021160102.1 | 528 |
| NW_021160105.1 | 238 |
| NW_021160106.1 | 1431 |
| NW_021160107.1 | 173 |
| NW_021160109.1 | 1409 |
| NW_021160110.1 | 6445 |
| NW_021160111.1 | 1552 |
| NW_021160113.1 | 30994 |
| NW_021160114.1 | 1837 |
| NW_021160116.1 | 106 |
| NW_021160121.1 | 528 |
| NW_021160122.1 | 1101 |
| NW_021160123.1 | 1171 |
| NW_021160125.1 | 19 |
| NW_021160136.1 | 737 |
| NW_021160140.1 | 758 |
| NW_021160141.1 | 1910 |
| NW_021160142.1 | 3560 |
| NW_021160144.1 | 20666 |
| NW_021160145.1 | 268 |
| NW_021160147.1 | 415 |
| NW_021160148.1 | 1191 |
| NW_021160150.1 | 2678 |
| NW_021160155.1 | 638 |
| NW_021160158.1 | 765 |
| NW_021160159.1 | 1094 |
| NW_021160161.1 | 14915 |
| NW_021160167.1 | 51 |
| NW_021160168.1 | 58 |
| NW_021160175.1 | 10847 |
| NW_021160179.1 | 190 |
| NW_021160182.1 | 2733 |
| NW_021160184.1 | 273 |
| NW_021160185.1 | 295 |
| NW_021160186.1 | 1597 |
| NW_021160187.1 | 462 |
| NW_021160188.1 | 383 |
| NW_021160189.1 | 598 |
| NW_021160190.1 | 402 |
| NW_021160191.1 | 407 |
| NW_021160193.1 | 15 |
| NW_021160196.1 | 2630 |
| NW_021160197.1 | 858 |
| NW_021160199.1 | 294 |
| NW_021160200.1 | 531 |
| NW_021160201.1 | 1077 |
| NW_021160202.1 | 631 |
| NW_021160203.1 | 1669 |
| NW_021160204.1 | 1295 |
| NW_021160205.1 | 369 |
| NW_021160206.1 | 836 |
| NW_021160207.1 | 555 |
| NW_021160209.1 | 2710 |
| NW_021160211.1 | 1534 |
| NW_021160220.1 | 4240 |
| NW_021160221.1 | 715 |
| NW_021160222.1 | 322 |
| NW_021160223.1 | 4429 |
| NW_021160225.1 | 1463 |
| NW_021160226.1 | 1503 |
| NW_021160228.1 | 594 |
| NW_021160229.1 | 683 |
| NW_021160231.1 | 394 |
| NW_021160233.1 | 1166 |
| NW_021160234.1 | 8473 |
| NW_021160236.1 | 409 |
| NW_021160237.1 | 2909 |
| NW_021160238.1 | 4149 |
| NW_021160239.1 | 212 |
| NW_021160242.1 | 600 |
| NW_021160243.1 | 50 |
| NW_021160244.1 | 10923 |
| NW_021160245.1 | 506 |
| NW_021160248.1 | 144 |
| NW_021160249.1 | 1152 |
| NW_021160250.1 | 280 |
| NW_021160251.1 | 905 |
| NW_021160252.1 | 2146 |
| NW_021160255.1 | 473 |
| NW_021160263.1 | 416 |
| NW_021160266.1 | 277 |
| NW_021160268.1 | 345 |
| NW_021160270.1 | 491 |
| NW_021160271.1 | 584 |
| NW_021160272.1 | 1502 |
| NW_021160273.1 | 173 |
| NW_021160277.1 | 120 |
| NW_021160278.1 | 724 |
| NW_021160279.1 | 1579 |
| NW_021160282.1 | 4169 |
| NW_021160284.1 | 363 |
| NW_021160285.1 | 484 |
| NW_021160291.1 | 143 |
| NW_021160293.1 | 2111 |
| NW_021160294.1 | 1672 |
| NW_021160295.1 | 884 |
| NW_021160297.1 | 1153 |
| NW_021160298.1 | 315 |
| NW_021160300.1 | 2883 |
| NW_021160305.1 | 81 |
| NW_021160306.1 | 194 |
| NW_021160307.1 | 1026 |
| NW_021160308.1 | 701 |
| NW_021160310.1 | 6056 |
| NW_021160311.1 | 3547 |
| NW_021160312.1 | 3190 |
| NW_021160313.1 | 2006 |
| NW_021160319.1 | 502 |
| NW_021160320.1 | 1116 |
| NW_021160324.1 | 1821 |
| NW_021160325.1 | 531 |
| NW_021160326.1 | 533 |
| NW_021160327.1 | 1413 |
| NW_021160328.1 | 6644 |
| NW_021160329.1 | 881 |
| NW_021160338.1 | 388 |
| NW_021160339.1 | 154 |
| NW_021160341.1 | 470 |
| NW_021160347.1 | 2204 |
| NW_021160353.1 | 785 |
| NW_021160354.1 | 368 |
| NW_021160355.1 | 1263 |
| NW_021160356.1 | 554 |
| NW_021160357.1 | 274 |
| NW_021160358.1 | 860 |
| NW_021160359.1 | 1146 |
| NW_021160361.1 | 342 |
| NW_021160362.1 | 471 |
| NW_021160363.1 | 1392 |
| NW_021160364.1 | 1339 |
| NW_021160365.1 | 1381 |
| NW_021160366.1 | 2454 |
| NW_021160367.1 | 5637 |
| NW_021160368.1 | 293 |
| NW_021160369.1 | 403 |
| NW_021160370.1 | 3073 |
| NW_021160371.1 | 530 |
| NW_021160372.1 | 6012 |
| NW_021160373.1 | 2095 |
| NW_021160374.1 | 1608 |
| NW_021160375.1 | 6573 |
| NW_021160376.1 | 13350 |
| NW_021160381.1 | 102 |
| NW_021160383.1 | 2601 |
| NW_021160384.1 | 446 |
| NW_021160401.1 | 135 |
| NW_021160410.1 | 1366 |
| NW_021160417.1 | 272 |
| NW_021160452.1 | 134 |
| NW_021160482.1 | 35 |
| NW_021160484.1 | 422 |
| NW_021160495.1 | 6354 |
| NW_021160514.1 | 254 |
| NW_021160523.1 | 213 |
| NW_021160525.1 | 125 |
| NW_021160535.1 | 276 |
| NW_021160549.1 | 625 |
| NW_021160573.1 | 3580 |
| NW_021160589.1 | 12 |
| NW_021160606.1 | 7086 |
| NW_021160623.1 | 14 |
| NW_021160625.1 | 5 |
| NW_021160629.1 | 12 |
| NW_021160635.1 | 61 |
| NW_021160655.1 | 602 |
| NW_021160656.1 | 484 |
| NW_021160678.1 | 46 |
| NW_021160682.1 | 5066 |
| NW_021160688.1 | 1219 |
| NW_021160701.1 | 9021 |
| NW_021160725.1 | 60 |
| NW_021160726.1 | 41121 |
| NW_021160734.1 | 45 |
| NW_021160737.1 | 1 |
| NW_021160757.1 | 3 |
| NW_021160770.1 | 40424 |
| NW_021160772.1 | 349 |
| NW_021160805.1 | 668 |
| NW_021160821.1 | 47 |
| NW_021160827.1 | 14380 |
| NW_021160832.1 | 34 |
| NW_021160834.1 | 158 |
| NW_021160848.1 | 26 |
| NW_021160868.1 | 4 |
| NW_021160890.1 | 350 |
| NW_021160903.1 | 1374 |
| NW_021160919.1 | 632 |
| NW_021160925.1 | 66 |
| NW_021160946.1 | 840 |
| NW_021160955.1 | 89 |
| NW_021160961.1 | 14 |
| NW_021160976.1 | 774 |
| NW_021160983.1 | 18 |
| NW_021160986.1 | 12 |
| NW_021161026.1 | 3 |
| NW_021161033.1 | 3 |
| NW_021161038.1 | 752 |
| NW_021161041.1 | 8 |
| NW_021161043.1 | 21 |
| NW_021161046.1 | 2187 |
| NW_021161062.1 | 106 |
| NW_021161066.1 | 1276 |
| NW_021161106.1 | 747 |
| NW_021161107.1 | 73 |
| NW_021161113.1 | 528 |
| NW_021161114.1 | 11641 |
| NW_021161131.1 | 16 |
| NW_021161133.1 | 379 |
| NW_021161138.1 | 34 |
| NW_021161152.1 | 525 |
| NW_021161164.1 | 1449 |
| NW_021161166.1 | 1009 |
| NW_021161184.1 | 79 |
| NW_021161201.1 | 424 |
| NW_021161211.1 | 632 |
| NW_021161213.1 | 67 |
| NW_021161224.1 | 3060 |
| NW_021161226.1 | 1524 |
| NW_021161241.1 | 53 |
| NW_021161247.1 | 5 |
| NW_021161253.1 | 9 |
| NW_021161261.1 | 158 |
| NW_021161269.1 | 817 |
| NW_021161274.1 | 1 |
| NW_021161282.1 | 3517 |
| NW_021161303.1 | 134 |
| NW_021161305.1 | 66 |
| NW_021161307.1 | 256 |
| NW_021161312.1 | 9 |
| NW_021161320.1 | 1081 |
| NW_021161336.1 | 285 |
| NW_021161338.1 | 192 |
| NW_021161340.1 | 192 |
| NW_021161348.1 | 764 |
| NW_021161355.1 | 3252 |
| NW_021161360.1 | 59 |
| NW_021161364.1 | 983 |
| NW_021161377.1 | 2924 |
| NW_021161379.1 | 12 |
| NW_021161380.1 | 22 |
| NW_021161385.1 | 109 |
| NW_021161392.1 | 5002 |
| NW_021161394.1 | 240 |
| NW_021161396.1 | 21 |
| NW_021161399.1 | 607 |
| NW_021161404.1 | 162 |
| NW_021161413.1 | 92 |
| NW_021161421.1 | 29 |
| NW_021161422.1 | 106 |
| NW_021161427.1 | 381 |
| NW_021161433.1 | 59 |
| NW_021161437.1 | 78 |
| NW_021161446.1 | 96 |
| NW_021161463.1 | 11 |
| NW_021161468.1 | 103 |
| NW_021161470.1 | 52 |
| NW_021161483.1 | 3 |
| NW_021161486.1 | 827 |
| NW_021161494.1 | 97 |
| NW_021161497.1 | 106 |
| NW_021161505.1 | 749 |
| NW_021161507.1 | 671 |
| NW_021161508.1 | 1569 |
| NW_021161519.1 | 1099 |
| NW_021161520.1 | 7181 |
| NW_021161523.1 | 127 |
| NW_021161525.1 | 2277 |
| NW_021161526.1 | 547 |
| NW_021161532.1 | 107 |
| NW_021161535.1 | 181 |
| NW_021161537.1 | 5111 |
| NW_021161545.1 | 6694 |
| NW_021161552.1 | 146 |
| NW_021161554.1 | 283 |
| NW_021161561.1 | 1044 |
| NW_021161562.1 | 1056 |
| NW_021161567.1 | 118 |
| NW_021161570.1 | 9 |
| NW_021161582.1 | 1138 |
| NW_021161585.1 | 2492 |
| NW_021161590.1 | 4014 |
| NW_021161593.1 | 3722 |
| NW_021161596.1 | 13410 |
| NW_021161601.1 | 292 |
| NW_021161608.1 | 213 |
| NW_021161609.1 | 69 |
| NW_021161614.1 | 381 |
| NW_021161616.1 | 390 |
| NW_021161617.1 | 41 |
| NW_021161627.1 | 440 |
| NW_021161633.1 | 4006 |
| NW_021161642.1 | 139 |
| NW_021161648.1 | 17431 |
| NW_021161679.1 | 564 |
| NW_021161680.1 | 256 |
| NW_021161686.1 | 3184 |
| NW_021161694.1 | 518 |
| NW_021161695.1 | 662 |
| NW_021161696.1 | 211 |
| NW_021161699.1 | 894 |
| NW_021161700.1 | 36 |
| NW_021161713.1 | 54 |
| NW_021161715.1 | 45 |
| NW_021161718.1 | 2467 |
| NW_021161725.1 | 191 |
| NW_021161737.1 | 422 |
| NW_021161743.1 | 142 |
| NW_021161747.1 | 24 |
| NW_021161754.1 | 3931 |
| NW_021161759.1 | 90 |
| NW_021161767.1 | 512 |
| NW_021161769.1 | 442 |
| NW_021161772.1 | 262 |
| NW_021161784.1 | 128 |
| NW_021161790.1 | 1725 |
| NW_021161794.1 | 41 |
| NW_021161796.1 | 152 |
| NW_021161798.1 | 511 |
| NW_021161830.1 | 574 |
| NW_021161832.1 | 250 |
| NW_021161839.1 | 791 |
| NW_021161842.1 | 332 |
| NW_021161843.1 | 341 |
| NW_021161845.1 | 2915 |
| NW_021161850.1 | 50576 |
| NW_021161853.1 | 4803 |
| NW_021161857.1 | 440 |
| NW_021161862.1 | 427 |
| NW_021161876.1 | 283 |
| NW_021161878.1 | 670 |
| NW_021161881.1 | 2361 |
| NW_021161888.1 | 3837 |
| NW_021161902.1 | 937 |
| NW_021161927.1 | 233 |
| NW_021161934.1 | 1614 |
| NW_021161939.1 | 3093 |
| NW_021161954.1 | 2248 |
| NW_021161955.1 | 764 |
| NW_021161956.1 | 7970 |
| NW_021161958.1 | 98 |
| NW_021161961.1 | 1263 |
| NW_021161962.1 | 156 |
| NW_021161965.1 | 82 |
| NW_021161996.1 | 678 |
| NW_021162004.1 | 150 |
| NW_021162007.1 | 675 |
| NW_021162009.1 | 14486 |
| NW_021162025.1 | 1604 |
| NW_021162035.1 | 226 |
| NW_021162047.1 | 449 |
| NW_021162055.1 | 3317 |
| NW_021162083.1 | 1700 |
| NW_021162091.1 | 10604 |
| NW_021162100.1 | 16304 |
| NW_021162108.1 | 3215 |
| NW_021162157.1 | 529 |
| NW_021162208.1 | 530 |
| NW_021162222.1 | 533 |
| NW_021162226.1 | 263 |
| NW_021162246.1 | 3213 |
| NW_021162251.1 | 2915 |
| NW_021162253.1 | 13 |
| NW_021162263.1 | 386 |
| NW_021162265.1 | 616 |
| NW_021162274.1 | 6458 |
| NW_021162277.1 | 324 |
| NW_021162463.1 | 50 |
| NW_021162495.1 | 138 |
| NW_021162553.1 | 73 |
| NW_021162593.1 | 15 |
| NW_021162599.1 | 1760 |
| NW_021162621.1 | 75 |
| NW_021162643.1 | 2477 |
| NW_021162814.1 | 56 |
| NW_021162871.1 | 85 |
| NW_021162949.1 | 6 |
| NW_021163002.1 | 5 |
Fragment lengths
| fragments | min | max | mean | median | |
|---|---|---|---|---|---|
| fragments | 338624150 | 1 | 5041 | 147.16 | 130 |
×
Files
| Filename | Size | md5 |
|---|---|---|
| a97266b89148b310e0778eba29c7d1b394162dac.gz | 3.08 GB | d54d11f459b2b5b6126f0deb23b2386a |
| a97266b89148b310e0778eba29c7d1b394162dac.gz.tbi | 1.27 MB | aedc12484d7d6a7b59334dfabe090d1b |
| fragment_count_dist_plot.py | 853.0 B | 9d735ee8c687286d50484e7f1e398e60 |
| genomic_resource.yaml | 1.5 KB | 615317659578ce27f03bb31eec5430e9 |
| statistics/ |