Resource
| Id | summary/johansen2025Crossspecies/atac_fragments/macaque/f385e9bc96bd6076a5446499378c7bc7d35d8699 |
|---|---|
| Type | fragment_score |
| Version | 0 |
| Summary | ATAC fragments for macaque from library f385e9bc96bd6076a5446499378c7bc7d35d8699 |
| Description | |
| Labels |
|
Scores (2)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| cell | str |
cell |
 |
TGTGTGAGTTAACGAT-1, TCAGTAGGTAATCCCT-1, CTTTGGGAGTAGCGGG-1, AACTTAGTCTGCAACG-1, GACATAGAGCACGTTG-1 (top 5 of 6164 values) | ||
| count | int |
count |
 |
[1, 1] |
|
n counts fragments; sd is the population standard deviation.
Fragments
| Chromosome | Fragments |
|---|---|
| all chromosomes | 437754480 |
| NC_005943.1 | 16003 |
| NC_027914.1 | 365328 |
| NC_041754.1 | 39666167 |
| NC_041755.1 | 27592342 |
| NC_041756.1 | 28191830 |
| NC_041757.1 | 23687625 |
| NC_041758.1 | 20588079 |
| NC_041759.1 | 23188186 |
| NC_041760.1 | 29294176 |
| NC_041761.1 | 19500832 |
| NC_041762.1 | 20492451 |
| NC_041763.1 | 21647286 |
| NC_041764.1 | 21474177 |
| NC_041765.1 | 16845983 |
| NC_041766.1 | 16857767 |
| NC_041767.1 | 23345633 |
| NC_041768.1 | 18018152 |
| NC_041769.1 | 20092479 |
| NC_041770.1 | 11576407 |
| NC_041771.1 | 9669874 |
| NC_041772.1 | 17269776 |
| NC_041773.1 | 18424418 |
| NC_041774.1 | 9019927 |
| NW_021160097.1 | 76 |
| NW_021160098.1 | 672 |
| NW_021160099.1 | 149 |
| NW_021160102.1 | 541 |
| NW_021160105.1 | 241 |
| NW_021160106.1 | 1740 |
| NW_021160107.1 | 239 |
| NW_021160109.1 | 2175 |
| NW_021160110.1 | 9606 |
| NW_021160111.1 | 1747 |
| NW_021160113.1 | 43682 |
| NW_021160114.1 | 2499 |
| NW_021160116.1 | 131 |
| NW_021160121.1 | 692 |
| NW_021160122.1 | 1321 |
| NW_021160123.1 | 1639 |
| NW_021160125.1 | 29 |
| NW_021160136.1 | 794 |
| NW_021160140.1 | 1060 |
| NW_021160141.1 | 2394 |
| NW_021160142.1 | 4368 |
| NW_021160144.1 | 21338 |
| NW_021160145.1 | 325 |
| NW_021160147.1 | 457 |
| NW_021160148.1 | 1626 |
| NW_021160150.1 | 4271 |
| NW_021160155.1 | 799 |
| NW_021160158.1 | 897 |
| NW_021160159.1 | 1215 |
| NW_021160161.1 | 20207 |
| NW_021160167.1 | 98 |
| NW_021160168.1 | 84 |
| NW_021160175.1 | 12154 |
| NW_021160179.1 | 242 |
| NW_021160182.1 | 4102 |
| NW_021160184.1 | 437 |
| NW_021160185.1 | 318 |
| NW_021160186.1 | 1908 |
| NW_021160187.1 | 457 |
| NW_021160188.1 | 412 |
| NW_021160189.1 | 692 |
| NW_021160190.1 | 581 |
| NW_021160191.1 | 479 |
| NW_021160193.1 | 20 |
| NW_021160196.1 | 3283 |
| NW_021160197.1 | 983 |
| NW_021160199.1 | 370 |
| NW_021160200.1 | 503 |
| NW_021160201.1 | 1564 |
| NW_021160202.1 | 724 |
| NW_021160203.1 | 1881 |
| NW_021160204.1 | 1510 |
| NW_021160205.1 | 471 |
| NW_021160206.1 | 1084 |
| NW_021160207.1 | 548 |
| NW_021160209.1 | 3050 |
| NW_021160211.1 | 1942 |
| NW_021160220.1 | 5855 |
| NW_021160221.1 | 952 |
| NW_021160222.1 | 421 |
| NW_021160223.1 | 5917 |
| NW_021160225.1 | 1855 |
| NW_021160226.1 | 1767 |
| NW_021160228.1 | 653 |
| NW_021160229.1 | 735 |
| NW_021160231.1 | 457 |
| NW_021160233.1 | 1411 |
| NW_021160234.1 | 12307 |
| NW_021160236.1 | 498 |
| NW_021160237.1 | 4239 |
| NW_021160238.1 | 5743 |
| NW_021160239.1 | 224 |
| NW_021160242.1 | 646 |
| NW_021160243.1 | 69 |
| NW_021160244.1 | 14991 |
| NW_021160245.1 | 644 |
| NW_021160248.1 | 210 |
| NW_021160249.1 | 1446 |
| NW_021160250.1 | 375 |
| NW_021160251.1 | 1129 |
| NW_021160252.1 | 2606 |
| NW_021160255.1 | 619 |
| NW_021160263.1 | 419 |
| NW_021160266.1 | 348 |
| NW_021160268.1 | 438 |
| NW_021160270.1 | 617 |
| NW_021160271.1 | 906 |
| NW_021160272.1 | 2219 |
| NW_021160273.1 | 253 |
| NW_021160277.1 | 141 |
| NW_021160278.1 | 849 |
| NW_021160279.1 | 2041 |
| NW_021160282.1 | 5193 |
| NW_021160284.1 | 475 |
| NW_021160285.1 | 654 |
| NW_021160291.1 | 168 |
| NW_021160293.1 | 2834 |
| NW_021160294.1 | 2215 |
| NW_021160295.1 | 1210 |
| NW_021160297.1 | 1475 |
| NW_021160298.1 | 531 |
| NW_021160300.1 | 3282 |
| NW_021160305.1 | 101 |
| NW_021160306.1 | 241 |
| NW_021160307.1 | 1140 |
| NW_021160308.1 | 802 |
| NW_021160310.1 | 8503 |
| NW_021160311.1 | 4780 |
| NW_021160312.1 | 4637 |
| NW_021160313.1 | 2236 |
| NW_021160319.1 | 602 |
| NW_021160320.1 | 1282 |
| NW_021160324.1 | 1801 |
| NW_021160325.1 | 818 |
| NW_021160326.1 | 635 |
| NW_021160327.1 | 2034 |
| NW_021160328.1 | 9448 |
| NW_021160329.1 | 915 |
| NW_021160338.1 | 414 |
| NW_021160339.1 | 154 |
| NW_021160341.1 | 607 |
| NW_021160347.1 | 2384 |
| NW_021160353.1 | 966 |
| NW_021160354.1 | 537 |
| NW_021160355.1 | 1796 |
| NW_021160356.1 | 622 |
| NW_021160357.1 | 264 |
| NW_021160358.1 | 1004 |
| NW_021160359.1 | 1585 |
| NW_021160361.1 | 373 |
| NW_021160362.1 | 502 |
| NW_021160363.1 | 1518 |
| NW_021160364.1 | 1513 |
| NW_021160365.1 | 1581 |
| NW_021160366.1 | 2824 |
| NW_021160367.1 | 7232 |
| NW_021160368.1 | 382 |
| NW_021160369.1 | 444 |
| NW_021160370.1 | 3955 |
| NW_021160371.1 | 684 |
| NW_021160372.1 | 7427 |
| NW_021160373.1 | 2334 |
| NW_021160374.1 | 1981 |
| NW_021160375.1 | 7694 |
| NW_021160376.1 | 14704 |
| NW_021160381.1 | 125 |
| NW_021160383.1 | 3712 |
| NW_021160384.1 | 471 |
| NW_021160401.1 | 143 |
| NW_021160410.1 | 2175 |
| NW_021160417.1 | 318 |
| NW_021160452.1 | 213 |
| NW_021160482.1 | 27 |
| NW_021160484.1 | 420 |
| NW_021160495.1 | 6527 |
| NW_021160514.1 | 250 |
| NW_021160523.1 | 219 |
| NW_021160525.1 | 151 |
| NW_021160535.1 | 364 |
| NW_021160549.1 | 1051 |
| NW_021160573.1 | 4463 |
| NW_021160589.1 | 17 |
| NW_021160606.1 | 8676 |
| NW_021160623.1 | 20 |
| NW_021160625.1 | 4 |
| NW_021160629.1 | 25 |
| NW_021160635.1 | 59 |
| NW_021160655.1 | 902 |
| NW_021160656.1 | 579 |
| NW_021160678.1 | 54 |
| NW_021160682.1 | 6019 |
| NW_021160688.1 | 1610 |
| NW_021160701.1 | 10900 |
| NW_021160725.1 | 87 |
| NW_021160726.1 | 47502 |
| NW_021160734.1 | 95 |
| NW_021160737.1 | 1 |
| NW_021160757.1 | 2 |
| NW_021160770.1 | 50331 |
| NW_021160772.1 | 350 |
| NW_021160805.1 | 1028 |
| NW_021160821.1 | 52 |
| NW_021160827.1 | 18746 |
| NW_021160832.1 | 51 |
| NW_021160834.1 | 169 |
| NW_021160835.1 | 1 |
| NW_021160848.1 | 26 |
| NW_021160868.1 | 6 |
| NW_021160890.1 | 423 |
| NW_021160903.1 | 1232 |
| NW_021160919.1 | 778 |
| NW_021160925.1 | 59 |
| NW_021160946.1 | 1097 |
| NW_021160955.1 | 110 |
| NW_021160961.1 | 21 |
| NW_021160976.1 | 1148 |
| NW_021160983.1 | 21 |
| NW_021160986.1 | 4 |
| NW_021161026.1 | 7 |
| NW_021161033.1 | 1 |
| NW_021161038.1 | 708 |
| NW_021161041.1 | 11 |
| NW_021161043.1 | 30 |
| NW_021161046.1 | 2209 |
| NW_021161062.1 | 172 |
| NW_021161066.1 | 1509 |
| NW_021161106.1 | 945 |
| NW_021161107.1 | 91 |
| NW_021161113.1 | 710 |
| NW_021161114.1 | 11824 |
| NW_021161131.1 | 7 |
| NW_021161133.1 | 545 |
| NW_021161138.1 | 36 |
| NW_021161152.1 | 588 |
| NW_021161164.1 | 1367 |
| NW_021161166.1 | 1298 |
| NW_021161184.1 | 87 |
| NW_021161201.1 | 492 |
| NW_021161211.1 | 818 |
| NW_021161213.1 | 66 |
| NW_021161224.1 | 4062 |
| NW_021161226.1 | 1559 |
| NW_021161241.1 | 79 |
| NW_021161247.1 | 6 |
| NW_021161253.1 | 7 |
| NW_021161261.1 | 244 |
| NW_021161269.1 | 857 |
| NW_021161274.1 | 2 |
| NW_021161282.1 | 5613 |
| NW_021161303.1 | 171 |
| NW_021161305.1 | 67 |
| NW_021161307.1 | 281 |
| NW_021161312.1 | 11 |
| NW_021161320.1 | 1294 |
| NW_021161336.1 | 366 |
| NW_021161338.1 | 249 |
| NW_021161340.1 | 274 |
| NW_021161348.1 | 1134 |
| NW_021161355.1 | 3298 |
| NW_021161360.1 | 48 |
| NW_021161364.1 | 1505 |
| NW_021161377.1 | 3496 |
| NW_021161379.1 | 21 |
| NW_021161380.1 | 33 |
| NW_021161385.1 | 95 |
| NW_021161392.1 | 8376 |
| NW_021161394.1 | 382 |
| NW_021161396.1 | 9 |
| NW_021161399.1 | 756 |
| NW_021161404.1 | 241 |
| NW_021161413.1 | 172 |
| NW_021161421.1 | 29 |
| NW_021161422.1 | 219 |
| NW_021161427.1 | 408 |
| NW_021161433.1 | 55 |
| NW_021161437.1 | 87 |
| NW_021161446.1 | 135 |
| NW_021161463.1 | 10 |
| NW_021161468.1 | 127 |
| NW_021161470.1 | 57 |
| NW_021161483.1 | 5 |
| NW_021161486.1 | 1094 |
| NW_021161494.1 | 88 |
| NW_021161497.1 | 130 |
| NW_021161505.1 | 1133 |
| NW_021161507.1 | 865 |
| NW_021161508.1 | 1849 |
| NW_021161519.1 | 1352 |
| NW_021161520.1 | 9587 |
| NW_021161523.1 | 179 |
| NW_021161525.1 | 3837 |
| NW_021161526.1 | 831 |
| NW_021161532.1 | 133 |
| NW_021161535.1 | 236 |
| NW_021161537.1 | 5143 |
| NW_021161545.1 | 7330 |
| NW_021161552.1 | 163 |
| NW_021161554.1 | 338 |
| NW_021161561.1 | 1521 |
| NW_021161562.1 | 1267 |
| NW_021161567.1 | 123 |
| NW_021161570.1 | 4 |
| NW_021161582.1 | 1779 |
| NW_021161585.1 | 3464 |
| NW_021161590.1 | 5017 |
| NW_021161593.1 | 3955 |
| NW_021161596.1 | 15939 |
| NW_021161601.1 | 330 |
| NW_021161608.1 | 305 |
| NW_021161609.1 | 68 |
| NW_021161614.1 | 544 |
| NW_021161616.1 | 484 |
| NW_021161617.1 | 64 |
| NW_021161627.1 | 628 |
| NW_021161633.1 | 5230 |
| NW_021161642.1 | 138 |
| NW_021161648.1 | 23312 |
| NW_021161679.1 | 933 |
| NW_021161680.1 | 319 |
| NW_021161686.1 | 3865 |
| NW_021161694.1 | 425 |
| NW_021161695.1 | 646 |
| NW_021161696.1 | 286 |
| NW_021161699.1 | 1460 |
| NW_021161700.1 | 55 |
| NW_021161713.1 | 50 |
| NW_021161715.1 | 44 |
| NW_021161718.1 | 3629 |
| NW_021161725.1 | 252 |
| NW_021161737.1 | 572 |
| NW_021161743.1 | 179 |
| NW_021161747.1 | 37 |
| NW_021161754.1 | 5941 |
| NW_021161759.1 | 81 |
| NW_021161767.1 | 763 |
| NW_021161769.1 | 529 |
| NW_021161772.1 | 336 |
| NW_021161784.1 | 147 |
| NW_021161790.1 | 2979 |
| NW_021161794.1 | 50 |
| NW_021161796.1 | 203 |
| NW_021161798.1 | 583 |
| NW_021161830.1 | 594 |
| NW_021161832.1 | 262 |
| NW_021161839.1 | 759 |
| NW_021161842.1 | 338 |
| NW_021161843.1 | 416 |
| NW_021161845.1 | 3459 |
| NW_021161850.1 | 67200 |
| NW_021161853.1 | 6162 |
| NW_021161857.1 | 639 |
| NW_021161862.1 | 695 |
| NW_021161876.1 | 432 |
| NW_021161878.1 | 771 |
| NW_021161881.1 | 3308 |
| NW_021161888.1 | 5017 |
| NW_021161902.1 | 1555 |
| NW_021161927.1 | 440 |
| NW_021161934.1 | 1766 |
| NW_021161939.1 | 4772 |
| NW_021161954.1 | 3032 |
| NW_021161955.1 | 949 |
| NW_021161956.1 | 11396 |
| NW_021161958.1 | 161 |
| NW_021161961.1 | 1833 |
| NW_021161962.1 | 211 |
| NW_021161965.1 | 93 |
| NW_021161996.1 | 1187 |
| NW_021162004.1 | 154 |
| NW_021162007.1 | 766 |
| NW_021162009.1 | 18250 |
| NW_021162025.1 | 1860 |
| NW_021162035.1 | 327 |
| NW_021162047.1 | 669 |
| NW_021162055.1 | 3376 |
| NW_021162083.1 | 2117 |
| NW_021162091.1 | 14088 |
| NW_021162100.1 | 17318 |
| NW_021162108.1 | 4309 |
| NW_021162157.1 | 523 |
| NW_021162185.1 | 4 |
| NW_021162208.1 | 539 |
| NW_021162222.1 | 744 |
| NW_021162226.1 | 258 |
| NW_021162246.1 | 5172 |
| NW_021162251.1 | 4022 |
| NW_021162253.1 | 12 |
| NW_021162263.1 | 564 |
| NW_021162265.1 | 845 |
| NW_021162274.1 | 10555 |
| NW_021162277.1 | 447 |
| NW_021162463.1 | 51 |
| NW_021162495.1 | 205 |
| NW_021162553.1 | 133 |
| NW_021162593.1 | 6 |
| NW_021162599.1 | 2156 |
| NW_021162621.1 | 97 |
| NW_021162643.1 | 2966 |
| NW_021162814.1 | 90 |
| NW_021162871.1 | 161 |
| NW_021162949.1 | 7 |
| NW_021163002.1 | 5 |
Fragment lengths
| fragments | min | max | mean | median | |
|---|---|---|---|---|---|
| fragments | 437754480 | 1 | 5040 | 213 | 173 |
×
Files
| Filename | Size | md5 |
|---|---|---|
| f385e9bc96bd6076a5446499378c7bc7d35d8699.gz | 3.96 GB | 784332018bb31964b1ea424dd1c8aa1d |
| f385e9bc96bd6076a5446499378c7bc7d35d8699.gz.tbi | 1.51 MB | 5226fcbb6f3a5232b20935381b392402 |
| fragment_count_dist_plot.py | 853.0 B | 9d735ee8c687286d50484e7f1e398e60 |
| genomic_resource.yaml | 1.5 KB | 654b2d1185b8c442b677a40195c957c7 |
| statistics/ |