Resource
| Id | summary/johansen2025Crossspecies/atac_fragments/marmoset/P0047_1 |
|---|---|
| Type | fragment_score |
| Version | 0 |
| Summary | ATAC fragments for marmoset from library P0047_1 |
| Description | |
| Labels |
|
Scores (2)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| cell | str |
cell |
 |
CTATGATCACTTAACG-P0047_1, TCAAGGAAGTAAGTCC-P0047_1, TTAGGCTAGGGACCTC-P0047_1, CTTGCAACATTAAGTC-P0047_1, TGCCTGTTCACAGGAA-P0047_1 (top 5 of 2193 values) | ||
| count | int |
count |
 |
[1, 1] |
|
n counts fragments; sd is the population standard deviation.
Fragments
| Chromosome | Fragments |
|---|---|
| all chromosomes | 64605633 |
| chr1 | 5231688 |
| chr2 | 4196029 |
| chr3 | 3113613 |
| chr4 | 3527655 |
| chr5 | 5284028 |
| chr6 | 3360341 |
| chr7 | 4122991 |
| chr8 | 2478441 |
| chr9 | 3029018 |
| chr10 | 3396684 |
| chr11 | 3414408 |
| chr12 | 3410940 |
| chr13 | 2419901 |
| chr14 | 2404662 |
| chr15 | 2458020 |
| chr16 | 1912150 |
| chr17 | 1494885 |
| chr18 | 1227961 |
| chr19 | 1381457 |
| chr20 | 1322241 |
| chr21 | 948582 |
| chr22 | 2752905 |
| chrUn_NW_026528016v1 | 11 |
| chrUn_NW_026528017v1 | 50 |
| chrUn_NW_026528021v1 | 241 |
| chrUn_NW_026528026v1 | 279 |
| chrUn_NW_026528029v1 | 194 |
| chrUn_NW_026528038v1 | 135 |
| chrUn_NW_026528039v1 | 174 |
| chrUn_NW_026528065v1 | 189 |
| chrUn_NW_026528075v1 | 147 |
| chrUn_NW_026528103v1 | 33 |
| chrUn_NW_026528123v1 | 6 |
| chrUn_NW_026528125v1 | 55 |
| chrUn_NW_026528140v1 | 355 |
| chrUn_NW_026528210v1 | 51 |
| chrUn_NW_026528215v1 | 65 |
| chrUn_NW_026528218v1 | 1 |
| chrUn_NW_026528219v1 | 4 |
| chrUn_NW_026528220v1 | 1 |
| chrUn_NW_026528221v1 | 3 |
| chrUn_NW_026528224v1 | 3 |
| chrUn_NW_026528225v1 | 32 |
| chrUn_NW_026528226v1 | 103 |
| chrUn_NW_026528228v1 | 89 |
| chrUn_NW_026528230v1 | 107 |
| chrUn_NW_026528232v1 | 312 |
| chrUn_NW_026528259v1 | 3 |
| chrUn_NW_026528278v1 | 216 |
| chrUn_NW_026528285v1 | 6 |
| chrUn_NW_026528292v1 | 6 |
| chrUn_NW_026528295v1 | 165 |
| chrUn_NW_026528296v1 | 4767 |
| chrUn_NW_026528310v1 | 50 |
| chrUn_NW_026528320v1 | 11 |
| chrUn_NW_026528327v1 | 13 |
| chrUn_NW_026528332v1 | 10 |
| chrUn_NW_026528335v1 | 1 |
| chrUn_NW_026528338v1 | 18 |
| chrUn_NW_026528339v1 | 21 |
| chrUn_NW_026528345v1 | 13 |
| chrUn_NW_026528347v1 | 3 |
| chrUn_NW_026528350v1 | 7 |
| chrUn_NW_026528353v1 | 12 |
| chrUn_NW_026528356v1 | 7 |
| chrUn_NW_026528358v1 | 1 |
| chrUn_NW_026528360v1 | 3 |
| chrUn_NW_026528363v1 | 110 |
| chrUn_NW_026528370v1 | 111 |
| chrUn_NW_026528371v1 | 267 |
| chrUn_NW_026528372v1 | 101 |
| chrUn_NW_026528373v1 | 252 |
| chrUn_NW_026528378v1 | 6 |
| chrUn_NW_026528380v1 | 4 |
| chrUn_NW_026528382v1 | 1 |
| chrUn_NW_026528384v1 | 14 |
| chrUn_NW_026528385v1 | 13 |
| chrUn_NW_026528390v1 | 9 |
| chrUn_NW_026528393v1 | 5 |
| chrUn_NW_026528396v1 | 2 |
| chrUn_NW_026528397v1 | 6 |
| chrUn_NW_026528402v1 | 2 |
| chrUn_NW_026528403v1 | 5 |
| chrUn_NW_026528408v1 | 2 |
| chrUn_NW_026528409v1 | 4 |
| chrUn_NW_026528412v1 | 2 |
| chrUn_NW_026528413v1 | 1 |
| chrUn_NW_026528416v1 | 2 |
| chrUn_NW_026528420v1 | 1 |
| chrUn_NW_026528423v1 | 28 |
| chrUn_NW_026528431v1 | 79 |
| chrUn_NW_026528432v1 | 214 |
| chrUn_NW_026528433v1 | 3102 |
| chrUn_NW_026528440v1 | 7 |
| chrUn_NW_026528471v1 | 1 |
| chrUn_NW_026528480v1 | 266 |
| chrUn_NW_026528558v1 | 1305 |
| chrUn_NW_026528559v1 | 30 |
| chrUn_NW_026528561v1 | 3 |
| chrUn_NW_026528588v1 | 9 |
| chrUn_NW_026528589v1 | 7 |
| chrUn_NW_026528590v1 | 505 |
| chrUn_NW_026528596v1 | 1154 |
| chrUn_NW_026528609v1 | 5 |
| chrUn_NW_026528611v1 | 3 |
| chrUn_NW_026528615v1 | 9 |
| chrUn_NW_026528621v1 | 57 |
| chrUn_NW_026528631v1 | 19 |
| chrUn_NW_026528634v1 | 106 |
| chrUn_NW_026528644v1 | 1 |
| chrUn_NW_026528650v1 | 6 |
| chrUn_NW_026528656v1 | 2 |
| chrUn_NW_026528660v1 | 1 |
| chrUn_NW_026528661v1 | 3 |
| chrUn_NW_026528668v1 | 6 |
| chrUn_NW_026528677v1 | 10 |
| chrUn_NW_026528708v1 | 13 |
| chrUn_NW_026528719v1 | 276 |
| chrUn_NW_026528737v1 | 12 |
| chrUn_NW_026528739v1 | 2 |
| chrUn_NW_026528741v1 | 1 |
| chrUn_NW_026528745v1 | 9 |
| chrUn_NW_026528750v1 | 10 |
| chrUn_NW_026528752v1 | 1 |
| chrUn_NW_026528754v1 | 1 |
| chrUn_NW_026528755v1 | 61 |
| chrUn_NW_026528772v1 | 5 |
| chrUn_NW_026528775v1 | 7 |
| chrUn_NW_026528777v1 | 2 |
| chrUn_NW_026528784v1 | 5 |
| chrUn_NW_026528785v1 | 9 |
| chrUn_NW_026528786v1 | 10 |
| chrUn_NW_026528788v1 | 2 |
| chrUn_NW_026528792v1 | 1 |
| chrUn_NW_026528793v1 | 63 |
| chrUn_NW_026528795v1 | 40 |
| chrUn_NW_026528796v1 | 154 |
| chrUn_NW_026528797v1 | 1937 |
| chrUn_NW_026528798v1 | 340 |
| chrUn_NW_026528799v1 | 62 |
| chrUn_NW_026528880v1 | 10 |
| chrUn_NW_026528882v1 | 4 |
| chrUn_NW_026528884v1 | 4 |
| chrUn_NW_026528885v1 | 4 |
| chrUn_NW_026528887v1 | 17 |
| chrUn_NW_026528888v1 | 11 |
| chrUn_NW_026528889v1 | 11 |
| chrUn_NW_026528891v1 | 13 |
| chrUn_NW_026528893v1 | 4 |
| chrUn_NW_026528894v1 | 218 |
| chrUn_NW_026528899v1 | 9 |
| chrUn_NW_026528900v1 | 58 |
| chrUn_NW_026528902v1 | 67 |
| chrUn_NW_026528903v1 | 364 |
| chrUn_NW_026528917v1 | 103 |
| chrUn_NW_026528926v1 | 87 |
| chrUn_NW_026528928v1 | 673 |
| chrUn_NW_026528937v1 | 47 |
| chrUn_NW_026528938v1 | 7 |
| chrUn_NW_026528950v1 | 10 |
| chrUn_NW_026528952v1 | 13 |
| chrUn_NW_026528957v1 | 734 |
| chrUn_NW_026528960v1 | 87 |
| chrUn_NW_026528975v1 | 153 |
| chrUn_NW_026528984v1 | 9 |
| chrUn_NW_026528985v1 | 2 |
| chrUn_NW_026528987v1 | 6 |
| chrUn_NW_026528988v1 | 50 |
| chrUn_NW_026528989v1 | 12 |
| chrUn_NW_026528996v1 | 13 |
| chrUn_NW_026529007v1 | 181 |
| chrUn_NW_026529008v1 | 1824 |
| chrUn_NW_026529013v1 | 51 |
| chrUn_NW_026529015v1 | 102 |
| chrUn_NW_026529016v1 | 729 |
| chrUn_NW_026529060v1 | 451 |
| chrUn_NW_026529081v1 | 98 |
| chrUn_NW_026529085v1 | 239 |
| chrX | 1658769 |
| chrX_NW_026527892v1_random | 124 |
| chrX_NW_026527894v1_random | 287 |
| chrX_NW_026527897v1_random | 57 |
| chrY | 7812 |
| chrY_NW_026527911v1_random | 5 |
| chrY_NW_026527913v1_random | 14 |
| chrY_NW_026527914v1_random | 188 |
| chrY_NW_026527915v1_random | 1 |
| chrY_NW_026527919v1_random | 4 |
| chrY_NW_026527927v1_random | 1 |
| chrY_NW_026527932v1_random | 4 |
| chrY_NW_026527938v1_random | 375 |
| chrY_NW_026527939v1_random | 19 |
| chrY_NW_026527942v1_random | 3 |
| chrY_NW_026527949v1_random | 671 |
| chrY_NW_026527950v1_random | 669 |
| chrY_NW_026527951v1_random | 63 |
| chrY_NW_026527955v1_random | 32 |
| chrY_NW_026527956v1_random | 4892 |
| chrY_NW_026527958v1_random | 2894 |
| chrY_NW_026527960v1_random | 37 |
| chrY_NW_026527961v1_random | 106 |
| chrY_NW_026527966v1_random | 13932 |
| chrY_NW_026527967v1_random | 77 |
| chrY_NW_026527968v1_random | 620 |
| chrY_NW_026527969v1_random | 1 |
| chrY_NW_026527980v1_random | 47 |
Fragment lengths
| fragments | min | max | mean | median | |
|---|---|---|---|---|---|
| fragments | 64605633 | 1 | 5040 | 186.72 | 152 |
×
Files
| Filename | Size | md5 |
|---|---|---|
| P0047_1.gz | 604.2 MB | 6e8f591a724aa3c4ef2903c074caa35a |
| P0047_1.gz.tbi | 642.25 KB | 54b61018a45fe150726380802aa49fe7 |
| fragment_count_dist_plot.py | 853.0 B | 9d735ee8c687286d50484e7f1e398e60 |
| genomic_resource.yaml | 1.41 KB | ce57bb43aa6a7f73856293c9843492fc |
| statistics/ |