Resource

Id summary/johansen2025Crossspecies/pseudobulk_atac/macaque/BF_SKOR1_Glut/bigwigcontent_copy
Type position_score
Version 0
Summary ATAC big wig for BF_SKOR1_Glut cell type from macaque
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • cell_type: BF_SKOR1_Glut
  • data_types: atac_signal
  • dataset: johansen2025Crossspecies
  • modalities: ATAC
  • processing_level: RPKM_normalized
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (1)

ID Type Default annotation Description Histogram Range Summary
johansen2025Crossspecies_atac_macaque_BF_SKOR1_Glut float

johansen2025Crossspecies_atac_macaque_BF_SKOR1_Glut

RPKM?
HISTOGRAM FOR johansen2025Crossspecies_atac_macaque_BF_SKOR1_Glut [0.0773, 66.6]
n
1,257,581,950
mean
0.196
sd
0.322

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 125758195042.32% 103482887
NC_005943.1 1820 10.99% 170
NC_027914.1 1439570 12.25% 122911
NC_041754.1 107487810 48.07% 8864643
NC_041755.1 85555600 43.61% 7012179
NC_041756.1 84060620 45.37% 6910990
NC_041757.1 71725280 42.20% 5873880
NC_041758.1 70127070 37.44% 5750095
NC_041759.1 73931960 41.28% 6064336
NC_041760.1 80612220 47.46% 6626082
NC_041761.1 61618720 42.30% 5049710
NC_041762.1 61711690 46.01% 5062377
NC_041763.1 53343990 53.60% 4419492
NC_041764.1 60599280 45.54% 4981445
NC_041765.1 56310146 43.30% 4607666
NC_041766.1 49330670 45.37% 4046819
NC_041767.1 61241260 47.82% 5062945
NC_041768.1 51656050 45.60% 4255979
NC_041769.1 44529754 55.92% 3707954
NC_041770.1 37317600 39.10% 3053079
NC_041771.1 31644170 42.49% 2586140
NC_041772.1 30503970 52.31% 2567181
NC_041773.1 40433245 52.42% 3346443
NC_041774.1 39586600 25.81% 3272458
NW_021160097.1 330 0.89% 30
NW_021160098.1 2280 5.70% 200
NW_021160099.1 980 2.42% 93
NW_021160102.1 3500 6.97% 301
NW_021160105.1 2280 4.16% 204
NW_021160106.1 5440 9.79% 463
NW_021160107.1 2680 4.82% 231
NW_021160109.1 6970 8.47% 602
NW_021160110.1 19350 16.38% 1616
NW_021160111.1 20180 15.17% 1699
NW_021160113.1 49770 42.78% 4326
NW_021160114.1 12080 18.33% 1019
NW_021160116.1 950 2.68% 86
NW_021160121.1 2810 3.26% 243
NW_021160122.1 6270 6.81% 546
NW_021160123.1 5240 9.90% 436
NW_021160125.1 430 1.70% 39
NW_021160136.1 5180 8.67% 431
NW_021160140.1 7610 5.84% 677
NW_021160141.1 9500 7.08% 818
NW_021160142.1 18080 37.81% 1427
NW_021160144.1 109559 8.91% 9870
NW_021160145.1 1670 6.21% 143
NW_021160147.1 2270 7.56% 187
NW_021160148.1 5750 16.75% 488
NW_021160150.1 2870 7.65% 252
NW_021160155.1 4020 7.37% 351
NW_021160158.1 3600 4.78% 308
NW_021160159.1 9590 11.18% 820
NW_021160161.1 87870 11.90% 7345
NW_021160167.1 430 1.14% 43
NW_021160168.1 520 1.25% 49
NW_021160175.1 66290 35.80% 5331
NW_021160179.1 1600 4.12% 147
NW_021160182.1 8090 13.93% 694
NW_021160184.1 2150 3.51% 175
NW_021160185.1 2770 4.46% 237
NW_021160186.1 10300 15.97% 860
NW_021160187.1 1710 2.24% 154
NW_021160188.1 7320 8.82% 612
NW_021160189.1 6010 5.93% 510
NW_021160190.1 5650 15.81% 469
NW_021160191.1 1660 5.96% 140
NW_021160193.1 340 1.09% 29
NW_021160196.1 12310 26.70% 1013
NW_021160197.1 3890 7.51% 336
NW_021160199.1 3100 5.54% 274
NW_021160200.1 3640 6.17% 311
NW_021160201.1 7450 12.12% 617
NW_021160202.1 3160 4.83% 271
NW_021160203.1 8830 12.23% 734
NW_021160204.1 7790 10.70% 671
NW_021160205.1 3370 4.60% 293
NW_021160206.1 5720 6.83% 500
NW_021160207.1 8320 8.42% 703
NW_021160209.1 21440 3.20% 1787
NW_021160211.1 7980 5.99% 670
NW_021160220.1 11330 16.98% 931
NW_021160221.1 4710 6.65% 408
NW_021160222.1 1630 2.13% 153
NW_021160223.1 17110 20.54% 1446
NW_021160225.1 7420 13.78% 627
NW_021160226.1 3770 10.46% 318
NW_021160228.1 2040 4.26% 175
NW_021160229.1 3590 7.48% 303
NW_021160231.1 3710 6.81% 316
NW_021160233.1 4810 7.44% 406
NW_021160234.1 17850 27.23% 1518
NW_021160236.1 6820 8.77% 567
NW_021160237.1 20200 23.56% 1658
NW_021160238.1 12560 12.03% 1077
NW_021160239.1 2280 7.82% 188
NW_021160242.1 1720 5.82% 151
NW_021160243.1 800 2.54% 72
NW_021160244.1 20510 58.23% 1804
NW_021160245.1 2160 4.94% 181
NW_021160248.1 2520 3.37% 216
NW_021160249.1 7070 9.34% 602
NW_021160250.1 2340 3.64% 196
NW_021160251.1 8730 10.34% 721
NW_021160252.1 14080 15.89% 1167
NW_021160255.1 2710 9.65% 231
NW_021160263.1 1210 2.30% 117
NW_021160266.1 1540 2.05% 141
NW_021160268.1 2850 4.21% 261
NW_021160270.1 4050 11.63% 345
NW_021160271.1 1730 4.98% 148
NW_021160272.1 4460 12.75% 373
NW_021160273.1 1430 3.56% 128
NW_021160277.1 650 1.45% 58
NW_021160278.1 4230 7.60% 376
NW_021160279.1 5790 8.77% 488
NW_021160282.1 14450 11.68% 1192
NW_021160284.1 1580 4.54% 137
NW_021160285.1 2410 5.40% 212
NW_021160291.1 660 1.46% 59
NW_021160293.1 8090 15.31% 671
NW_021160294.1 9910 12.45% 840
NW_021160295.1 4160 5.04% 364
NW_021160297.1 5670 10.08% 482
NW_021160298.1 2630 9.65% 230
NW_021160300.1 9790 15.72% 833
NW_021160305.1 1210 3.00% 114
NW_021160306.1 3320 8.41% 278
NW_021160307.1 6590 12.51% 561
NW_021160308.1 5320 9.87% 455
NW_021160310.1 22000 37.76% 1911
NW_021160311.1 13990 17.77% 1197
NW_021160312.1 11730 13.27% 999
NW_021160313.1 14020 14.82% 1171
NW_021160319.1 5520 12.71% 454
NW_021160320.1 4660 8.87% 399
NW_021160324.1 8880 13.96% 736
NW_021160325.1 5700 8.75% 465
NW_021160326.1 4520 6.94% 371
NW_021160327.1 7480 11.34% 646
NW_021160328.1 13180 20.81% 1109
NW_021160329.1 7250 13.50% 601
NW_021160338.1 1230 3.28% 114
NW_021160339.1 570 1.48% 47
NW_021160341.1 4190 9.05% 350
NW_021160347.1 16700 10.10% 1408
NW_021160353.1 4940 12.00% 412
NW_021160354.1 2300 5.48% 203
NW_021160355.1 3370 6.07% 288
NW_021160356.1 2890 3.79% 257
NW_021160357.1 980 3.22% 89
NW_021160358.1 4990 12.65% 419
NW_021160359.1 5850 14.25% 468
NW_021160361.1 1710 3.63% 146
NW_021160362.1 2580 4.81% 236
NW_021160363.1 6590 10.82% 548
NW_021160364.1 6640 10.74% 562
NW_021160365.1 7270 10.94% 609
NW_021160366.1 7230 10.15% 631
NW_021160367.1 15280 20.00% 1310
NW_021160368.1 2130 2.70% 189
NW_021160369.1 3620 4.43% 314
NW_021160370.1 10200 11.40% 823
NW_021160371.1 4360 4.82% 391
NW_021160372.1 19240 14.31% 1626
NW_021160373.1 12560 21.60% 1027
NW_021160374.1 8190 6.59% 745
NW_021160375.1 26500 14.42% 2189
NW_021160376.1 113260 13.13% 9526
NW_021160381.1 840 1.72% 75
NW_021160383.1 18620 26.99% 1562
NW_021160384.1 2230 2.80% 202
NW_021160401.1 950 5.84% 82
NW_021160410.1 6790 41.26% 591
NW_021160417.1 1670 2.95% 130
NW_021160452.1 1740 10.28% 129
NW_021160482.1 310 1.79% 29
NW_021160484.1 1990 11.44% 171
NW_021160495.1 85200 10.34% 7257
NW_021160514.1 1610 8.94% 129
NW_021160523.1 1150 6.36% 96
NW_021160525.1 1810 9.98% 154
NW_021160535.1 1770 9.66% 145
NW_021160549.1 2080 11.20% 183
NW_021160573.1 4400 23.12% 369
NW_021160589.1 190 0.99% 18
NW_021160606.1 63460 6.31% 5394
NW_021160623.1 960 4.85% 73
NW_021160625.1 230 1.16% 22
NW_021160629.1 340 1.71% 31
NW_021160635.1 490 2.44% 44
NW_021160655.1 2690 13.07% 223
NW_021160656.1 1310 6.40% 112
NW_021160678.1 310 1.49% 30
NW_021160682.1 9715 46.88% 795
NW_021160688.1 3510 17.19% 291
NW_021160701.1 5610 26.44% 480
NW_021160725.1 650 3.00% 57
NW_021160726.1 13220 60.79% 1214
NW_021160734.1 530 2.43% 46
NW_021160757.1 60 0.27% 4
NW_021160770.1 12322 54.45% 1148
NW_021160772.1 2120 9.35% 175
NW_021160805.1 4490 19.15% 368
NW_021160821.1 180 0.75% 18
NW_021160827.1 45230 6.16% 3785
NW_021160832.1 300 1.25% 28
NW_021160834.1 1550 6.43% 141
NW_021160835.1 20 0.12% 2
NW_021160848.1 200 0.82% 16
NW_021160890.1 1690 6.69% 149
NW_021160903.1 4340 16.39% 340
NW_021160919.1 1250 4.80% 112
NW_021160925.1 370 1.42% 30
NW_021160946.1 2170 8.20% 188
NW_021160955.1 2210 8.32% 182
NW_021160961.1 1270 4.75% 114
NW_021160976.1 5650 20.76% 468
NW_021160983.1 80 0.29% 7
NW_021160986.1 20 0.07% 2
NW_021161026.1 80 0.29% 8
NW_021161033.1 80 0.28% 8
NW_021161038.1 1680 6.21% 146
NW_021161041.1 1590 5.58% 141
NW_021161043.1 530 1.82% 44
NW_021161046.1 3150 10.68% 262
NW_021161062.1 540 1.82% 51
NW_021161066.1 5780 19.37% 478
NW_021161106.1 3450 11.26% 284
NW_021161107.1 1250 4.06% 105
NW_021161113.1 4270 12.66% 374
NW_021161114.1 4440 14.39% 395
NW_021161131.1 100 0.32% 10
NW_021161133.1 3140 2.11% 280
NW_021161138.1 310 0.99% 27
NW_021161152.1 2270 7.21% 202
NW_021161164.1 3110 9.62% 266
NW_021161166.1 4260 13.11% 376
NW_021161184.1 1000 3.38% 86
NW_021161201.1 1450 4.37% 118
NW_021161211.1 2890 8.66% 249
NW_021161213.1 350 1.05% 34
NW_021161224.1 5090 15.10% 424
NW_021161226.1 3410 10.23% 278
NW_021161241.1 350 1.02% 35
NW_021161247.1 20 0.06% 2
NW_021161253.1 320 0.92% 25
NW_021161261.1 1170 3.35% 104
NW_021161269.1 7580 21.60% 634
NW_021161282.1 14060 36.17% 1189
NW_021161303.1 610 1.69% 58
NW_021161305.1 420 1.16% 38
NW_021161307.1 1020 3.84% 88
NW_021161312.1 250 0.70% 22
NW_021161320.1 5820 5.92% 492
NW_021161336.1 3560 9.66% 303
NW_021161338.1 530 1.43% 52
NW_021161340.1 1500 4.08% 135
NW_021161348.1 2840 7.59% 238
NW_021161355.1 3970 10.27% 333
NW_021161360.1 420 1.12% 39
NW_021161364.1 2000 5.24% 173
NW_021161377.1 11290 28.40% 941
NW_021161379.1 170 0.44% 16
NW_021161380.1 120 0.38% 12
NW_021161385.1 390 1.00% 34
NW_021161392.1 7290 18.64% 636
NW_021161394.1 2880 7.42% 241
NW_021161396.1 260 0.67% 24
NW_021161399.1 2110 9.62% 175
NW_021161404.1 1010 2.56% 92
NW_021161413.1 2020 5.10% 181
NW_021161421.1 400 1.01% 36
NW_021161422.1 380 0.96% 34
NW_021161427.1 2010 5.01% 163
NW_021161433.1 410 1.01% 36
NW_021161437.1 830 2.76% 73
NW_021161446.1 1190 2.91% 107
NW_021161463.1 20 0.05% 2
NW_021161468.1 1720 4.10% 150
NW_021161470.1 370 0.88% 33
NW_021161483.1 20 0.05% 2
NW_021161486.1 4010 9.42% 339
NW_021161494.1 590 1.38% 51
NW_021161497.1 550 1.28% 49
NW_021161505.1 4880 11.32% 413
NW_021161507.1 3670 8.48% 303
NW_021161508.1 12850 29.78% 1089
NW_021161519.1 3980 9.07% 347
NW_021161520.1 3410 7.91% 303
NW_021161523.1 2330 5.39% 195
NW_021161525.1 8400 19.08% 695
NW_021161526.1 5530 12.55% 478
NW_021161532.1 730 1.64% 67
NW_021161535.1 860 1.93% 76
NW_021161537.1 11260 25.39% 948
NW_021161545.1 11559 25.87% 1003
NW_021161552.1 840 1.98% 74
NW_021161554.1 2910 6.44% 249
NW_021161561.1 7280 16.11% 596
NW_021161562.1 7450 16.38% 604
NW_021161567.1 1730 3.80% 148
NW_021161570.1 150 0.33% 15
NW_021161582.1 9840 21.42% 833
NW_021161585.1 10450 22.68% 895
NW_021161590.1 14920 32.43% 1208
NW_021161593.1 13050 28.04% 1090
NW_021161596.1 40030 7.42% 3374
NW_021161601.1 4510 9.59% 382
NW_021161608.1 1250 2.68% 108
NW_021161609.1 550 1.17% 44
NW_021161614.1 1110 2.33% 99
NW_021161616.1 5160 10.78% 456
NW_021161617.1 320 0.67% 32
NW_021161627.1 3810 11.40% 314
NW_021161633.1 18080 36.59% 1492
NW_021161642.1 3140 6.31% 262
NW_021161648.1 17750 34.88% 1505
NW_021161679.1 4140 7.94% 345
NW_021161680.1 2200 4.25% 185
NW_021161686.1 13690 10.12% 1192
NW_021161694.1 1360 2.99% 110
NW_021161695.1 2410 4.51% 221
NW_021161696.1 1340 2.53% 114
NW_021161699.1 6574 13.60% 560
NW_021161700.1 270 0.51% 26
NW_021161713.1 810 1.50% 75
NW_021161715.1 370 0.68% 31
NW_021161718.1 10690 19.62% 872
NW_021161725.1 4070 12.94% 344
NW_021161737.1 4080 7.31% 345
NW_021161743.1 1750 3.13% 154
NW_021161747.1 450 0.80% 43
NW_021161754.1 16670 29.15% 1395
NW_021161759.1 530 0.92% 49
NW_021161767.1 7840 7.68% 650
NW_021161769.1 2410 4.16% 207
NW_021161772.1 3320 4.49% 284
NW_021161784.1 1120 21.76% 93
NW_021161790.1 14170 23.48% 1194
NW_021161794.1 860 1.42% 77
NW_021161796.1 1630 2.70% 147
NW_021161798.1 3890 8.26% 317
NW_021161830.1 5880 13.14% 506
NW_021161832.1 1780 2.81% 165
NW_021161839.1 1390 2.17% 125
NW_021161842.1 4590 7.04% 402
NW_021161843.1 1940 2.98% 174
NW_021161845.1 15285 23.37% 1276
NW_021161850.1 282471 25.28% 23472
NW_021161853.1 7400 11.21% 617
NW_021161857.1 6140 9.25% 532
NW_021161862.1 2450 3.70% 217
NW_021161876.1 9780 14.32% 815
NW_021161878.1 8460 12.44% 704
NW_021161881.1 8890 14.76% 738
NW_021161888.1 9880 14.23% 814
NW_021161902.1 9580 14.78% 803
NW_021161927.1 3780 5.05% 324
NW_021161934.1 6420 8.52% 540
NW_021161939.1 14020 18.51% 1199
NW_021161954.1 5150 6.68% 445
NW_021161955.1 4580 5.91% 386
NW_021161956.1 10100 13.22% 864
NW_021161958.1 14090 17.94% 1172
NW_021161961.1 6540 8.36% 568
NW_021161962.1 970 1.21% 95
NW_021161965.1 4750 6.01% 392
NW_021161996.1 3740 4.35% 316
NW_021162004.1 990 3.49% 77
NW_021162007.1 4690 5.34% 405
NW_021162009.1 29450 33.78% 2479
NW_021162025.1 5540 6.21% 470
NW_021162035.1 2720 2.92% 245
NW_021162047.1 5040 5.27% 463
NW_021162055.1 10100 10.15% 876
NW_021162083.1 11660 6.77% 1026
NW_021162091.1 13970 12.32% 1160
NW_021162100.1 12780 10.17% 1107
NW_021162108.1 12600 39.53% 1013
NW_021162157.1 1600 2.66% 137
NW_021162185.1 60 0.68% 6
NW_021162208.1 950 0.38% 87
NW_021162222.1 1990 5.26% 179
NW_021162226.1 1340 3.07% 118
NW_021162246.1 31040 29.38% 2512
NW_021162251.1 25870 36.22% 2108
NW_021162253.1 250 0.80% 23
NW_021162263.1 480 1.81% 39
NW_021162265.1 11340 29.34% 919
NW_021162274.1 36800 36.24% 3041
NW_021162277.1 2280 9.17% 190
NW_021162460.1 60 0.80% 6
NW_021162463.1 560 7.42% 50
NW_021162495.1 270 4.10% 22
NW_021162553.1 340 3.93% 29
NW_021162593.1 190 2.04% 19
NW_021162599.1 4720 50.35% 386
NW_021162621.1 580 5.94% 49
NW_021162643.1 6230 24.51% 531
NW_021162814.1 340 2.74% 25
NW_021162871.1 1450 10.44% 118
NW_021162949.1 20 0.13% 2
NW_021163002.1 20 0.13% 2
2536 contigs with no values (90199840 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 103482887 1 140 12.15 10
global segment-length histogram

Files

Filename Size md5
BF_SKOR1_Glut.bw 651.32 MB c97897abad8e0ba437c9cb72dd21db71
genomic_resource.yaml 1.11 KB 6721b33d5e699f5f137adabc925cbb54
statistics/