Resource

Id summary/johansen2025Crossspecies/pseudobulk_atac/macaque/Monocyte/bigwigcontent_copy
Type position_score
Version 0
Summary ATAC big wig for Monocyte cell type from macaque
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • cell_type: Monocyte
  • data_types: atac_signal
  • dataset: johansen2025Crossspecies
  • modalities: ATAC
  • processing_level: RPKM_normalized
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (1)

ID Type Default annotation Description Histogram Range Summary
johansen2025Crossspecies_atac_macaque_Monocyte float

johansen2025Crossspecies_atac_macaque_Monocyte

RPKM?
HISTOGRAM FOR johansen2025Crossspecies_atac_macaque_Monocyte [1.42, 524]
n
46,290,734
mean
1.94
sd
2.23

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 462907341.56% 4314376
NC_005943.1 1810 10.93% 173
NC_027914.1 32080 0.27% 3135
NC_041754.1 4094660 1.83% 379238
NC_041755.1 3039500 1.55% 286102
NC_041756.1 2869640 1.55% 269323
NC_041757.1 2740680 1.61% 256551
NC_041758.1 2289130 1.22% 217663
NC_041759.1 2552270 1.43% 240580
NC_041760.1 2966350 1.75% 275410
NC_041761.1 2015620 1.38% 190076
NC_041762.1 2164510 1.61% 201955
NC_041763.1 2105540 2.12% 193388
NC_041764.1 2438460 1.83% 226793
NC_041765.1 1849140 1.42% 174486
NC_041766.1 1726000 1.59% 161312
NC_041767.1 2307720 1.80% 213351
NC_041768.1 1881730 1.66% 175080
NC_041769.1 2104170 2.64% 191118
NC_041770.1 1155900 1.21% 110013
NC_041771.1 943880 1.27% 89596
NC_041772.1 2006620 3.44% 179905
NC_041773.1 1734190 2.25% 159045
NC_041774.1 1169090 0.76% 110575
NW_021160097.1 20 0.05% 2
NW_021160098.1 150 0.38% 14
NW_021160102.1 80 0.16% 8
NW_021160105.1 40 0.07% 4
NW_021160106.1 200 0.36% 18
NW_021160107.1 40 0.07% 4
NW_021160109.1 510 0.62% 46
NW_021160110.1 1010 0.85% 86
NW_021160111.1 270 0.20% 27
NW_021160113.1 2600 2.23% 228
NW_021160114.1 450 0.68% 43
NW_021160116.1 110 0.31% 11
NW_021160121.1 60 0.07% 6
NW_021160122.1 80 0.09% 8
NW_021160123.1 140 0.26% 13
NW_021160125.1 20 0.08% 2
NW_021160136.1 40 0.07% 4
NW_021160140.1 200 0.15% 20
NW_021160141.1 820 0.61% 76
NW_021160142.1 440 0.92% 44
NW_021160144.1 5590 0.45% 553
NW_021160145.1 20 0.07% 2
NW_021160147.1 80 0.27% 7
NW_021160148.1 100 0.29% 10
NW_021160150.1 640 1.71% 55
NW_021160155.1 300 0.55% 27
NW_021160158.1 80 0.11% 8
NW_021160159.1 1210 1.41% 113
NW_021160161.1 8802 1.19% 791
NW_021160167.1 40 0.11% 4
NW_021160175.1 2670 1.44% 247
NW_021160179.1 80 0.21% 8
NW_021160182.1 150 0.26% 15
NW_021160184.1 80 0.13% 8
NW_021160185.1 60 0.10% 5
NW_021160186.1 350 0.54% 33
NW_021160188.1 140 0.17% 14
NW_021160189.1 200 0.20% 20
NW_021160190.1 80 0.22% 8
NW_021160191.1 40 0.14% 4
NW_021160193.1 20 0.06% 2
NW_021160196.1 80 0.17% 8
NW_021160197.1 260 0.50% 23
NW_021160199.1 140 0.25% 13
NW_021160200.1 80 0.14% 8
NW_021160201.1 80 0.13% 8
NW_021160202.1 60 0.09% 6
NW_021160203.1 180 0.25% 18
NW_021160204.1 120 0.16% 12
NW_021160205.1 60 0.08% 6
NW_021160206.1 100 0.12% 9
NW_021160207.1 40 0.04% 4
NW_021160209.1 530 0.08% 52
NW_021160211.1 240 0.18% 24
NW_021160220.1 90 0.13% 9
NW_021160221.1 140 0.20% 14
NW_021160222.1 80 0.10% 8
NW_021160223.1 1910 2.29% 161
NW_021160225.1 80 0.15% 7
NW_021160226.1 60 0.17% 6
NW_021160228.1 110 0.23% 11
NW_021160229.1 70 0.15% 7
NW_021160231.1 100 0.18% 10
NW_021160233.1 150 0.23% 14
NW_021160234.1 790 1.21% 69
NW_021160236.1 60 0.08% 6
NW_021160237.1 540 0.63% 49
NW_021160238.1 540 0.52% 50
NW_021160239.1 20 0.07% 2
NW_021160242.1 60 0.20% 6
NW_021160244.1 1230 3.49% 112
NW_021160248.1 20 0.03% 2
NW_021160249.1 270 0.36% 27
NW_021160250.1 40 0.06% 4
NW_021160251.1 60 0.07% 6
NW_021160252.1 220 0.25% 20
NW_021160255.1 20 0.07% 2
NW_021160263.1 50 0.10% 5
NW_021160268.1 80 0.12% 8
NW_021160270.1 20 0.06% 2
NW_021160271.1 130 0.37% 12
NW_021160272.1 380 1.09% 33
NW_021160273.1 20 0.05% 2
NW_021160279.1 260 0.39% 25
NW_021160282.1 140 0.11% 14
NW_021160291.1 20 0.04% 2
NW_021160293.1 310 0.59% 30
NW_021160294.1 330 0.41% 32
NW_021160295.1 80 0.10% 8
NW_021160297.1 340 0.60% 30
NW_021160300.1 260 0.42% 26
NW_021160306.1 20 0.05% 2
NW_021160307.1 20 0.04% 2
NW_021160308.1 100 0.19% 10
NW_021160310.1 460 0.79% 45
NW_021160311.1 380 0.48% 33
NW_021160312.1 450 0.51% 43
NW_021160313.1 230 0.24% 23
NW_021160319.1 160 0.37% 16
NW_021160320.1 192 0.37% 20
NW_021160324.1 490 0.77% 47
NW_021160325.1 40 0.06% 4
NW_021160326.1 280 0.43% 27
NW_021160327.1 180 0.27% 18
NW_021160328.1 2110 3.33% 173
NW_021160329.1 200 0.37% 18
NW_021160338.1 20 0.05% 2
NW_021160339.1 60 0.16% 6
NW_021160341.1 260 0.56% 25
NW_021160347.1 210 0.13% 21
NW_021160353.1 40 0.10% 4
NW_021160354.1 140 0.33% 13
NW_021160355.1 140 0.25% 14
NW_021160356.1 60 0.08% 6
NW_021160357.1 550 1.81% 52
NW_021160358.1 300 0.76% 29
NW_021160359.1 100 0.24% 10
NW_021160361.1 20 0.04% 2
NW_021160362.1 40 0.07% 4
NW_021160363.1 410 0.67% 38
NW_021160364.1 480 0.78% 43
NW_021160365.1 160 0.24% 14
NW_021160366.1 290 0.41% 23
NW_021160367.1 930 1.22% 86
NW_021160368.1 20 0.03% 2
NW_021160369.1 40 0.05% 4
NW_021160370.1 340 0.38% 32
NW_021160371.1 20 0.02% 2
NW_021160372.1 1200 0.89% 108
NW_021160373.1 270 0.46% 22
NW_021160374.1 540 0.43% 44
NW_021160375.1 700 0.38% 66
NW_021160376.1 1460 0.17% 146
NW_021160383.1 280 0.41% 28
NW_021160384.1 20 0.03% 2
NW_021160410.1 190 1.15% 19
NW_021160417.1 20 0.04% 2
NW_021160452.1 100 0.59% 9
NW_021160484.1 20 0.11% 2
NW_021160495.1 3690 0.45% 366
NW_021160514.1 60 0.33% 6
NW_021160535.1 60 0.33% 6
NW_021160573.1 80 0.42% 8
NW_021160606.1 1370 0.14% 131
NW_021160623.1 40 0.20% 4
NW_021160655.1 200 0.97% 18
NW_021160682.1 40 0.19% 4
NW_021160688.1 570 2.79% 51
NW_021160701.1 230 1.08% 23
NW_021160725.1 20 0.09% 2
NW_021160726.1 1470 6.76% 134
NW_021160770.1 1860 8.22% 156
NW_021160772.1 20 0.09% 2
NW_021160805.1 60 0.26% 6
NW_021160827.1 1550 0.21% 151
NW_021160834.1 20 0.08% 2
NW_021160890.1 40 0.16% 4
NW_021160903.1 170 0.64% 17
NW_021160919.1 20 0.08% 2
NW_021160925.1 40 0.15% 4
NW_021160946.1 260 0.98% 22
NW_021160955.1 40 0.15% 4
NW_021160961.1 20 0.07% 2
NW_021160976.1 50 0.18% 5
NW_021161038.1 100 0.37% 10
NW_021161041.1 40 0.14% 4
NW_021161046.1 210 0.71% 21
NW_021161062.1 40 0.14% 4
NW_021161066.1 120 0.40% 12
NW_021161106.1 40 0.13% 4
NW_021161107.1 20 0.07% 2
NW_021161113.1 160 0.47% 15
NW_021161114.1 320 1.04% 30
NW_021161133.1 40 0.03% 4
NW_021161152.1 60 0.19% 6
NW_021161164.1 130 0.40% 13
NW_021161166.1 790 2.43% 70
NW_021161211.1 80 0.24% 8
NW_021161213.1 40 0.12% 4
NW_021161224.1 230 0.68% 21
NW_021161226.1 250 0.75% 20
NW_021161261.1 60 0.17% 6
NW_021161269.1 40 0.11% 4
NW_021161282.1 480 1.23% 45
NW_021161303.1 40 0.11% 4
NW_021161320.1 180 0.18% 18
NW_021161336.1 20 0.05% 2
NW_021161338.1 20 0.05% 2
NW_021161340.1 20 0.05% 2
NW_021161348.1 140 0.37% 14
NW_021161355.1 150 0.39% 15
NW_021161360.1 20 0.05% 2
NW_021161364.1 100 0.26% 9
NW_021161377.1 150 0.38% 14
NW_021161379.1 20 0.05% 2
NW_021161392.1 100 0.26% 10
NW_021161394.1 40 0.10% 4
NW_021161399.1 80 0.36% 8
NW_021161404.1 40 0.10% 4
NW_021161413.1 90 0.23% 8
NW_021161427.1 40 0.10% 4
NW_021161433.1 60 0.15% 6
NW_021161437.1 20 0.07% 2
NW_021161468.1 70 0.17% 7
NW_021161470.1 60 0.14% 6
NW_021161486.1 120 0.28% 12
NW_021161497.1 40 0.09% 4
NW_021161505.1 40 0.09% 4
NW_021161507.1 60 0.14% 6
NW_021161508.1 60 0.14% 6
NW_021161519.1 100 0.23% 10
NW_021161520.1 1250 2.90% 102
NW_021161523.1 20 0.05% 2
NW_021161525.1 100 0.23% 9
NW_021161526.1 120 0.27% 10
NW_021161535.1 20 0.04% 2
NW_021161537.1 340 0.77% 31
NW_021161545.1 420 0.94% 38
NW_021161552.1 20 0.05% 2
NW_021161554.1 60 0.13% 6
NW_021161561.1 190 0.42% 19
NW_021161562.1 270 0.59% 26
NW_021161570.1 20 0.04% 2
NW_021161582.1 350 0.76% 34
NW_021161585.1 60 0.13% 6
NW_021161590.1 390 0.85% 37
NW_021161593.1 140 0.30% 13
NW_021161596.1 780 0.14% 76
NW_021161601.1 100 0.21% 10
NW_021161608.1 40 0.09% 4
NW_021161616.1 1800 3.76% 166
NW_021161627.1 20 0.06% 2
NW_021161633.1 1060 2.15% 97
NW_021161642.1 20 0.04% 2
NW_021161648.1 550 1.08% 54
NW_021161679.1 20 0.04% 2
NW_021161680.1 140 0.27% 13
NW_021161686.1 390 0.29% 38
NW_021161694.1 40 0.09% 4
NW_021161695.1 130 0.24% 13
NW_021161696.1 40 0.08% 4
NW_021161699.1 120 0.25% 12
NW_021161718.1 200 0.37% 19
NW_021161725.1 80 0.25% 8
NW_021161737.1 130 0.23% 12
NW_021161743.1 20 0.04% 2
NW_021161747.1 20 0.04% 2
NW_021161754.1 120 0.21% 12
NW_021161767.1 80 0.08% 8
NW_021161769.1 40 0.07% 4
NW_021161772.1 20 0.03% 2
NW_021161790.1 100 0.17% 10
NW_021161796.1 40 0.07% 4
NW_021161798.1 40 0.08% 4
NW_021161830.1 80 0.18% 8
NW_021161832.1 40 0.06% 4
NW_021161839.1 60 0.09% 6
NW_021161842.1 120 0.18% 12
NW_021161843.1 50 0.08% 5
NW_021161845.1 1100 1.68% 98
NW_021161850.1 7870 0.70% 739
NW_021161853.1 530 0.80% 47
NW_021161857.1 100 0.15% 10
NW_021161862.1 20 0.03% 2
NW_021161876.1 20 0.03% 2
NW_021161878.1 180 0.26% 18
NW_021161881.1 140 0.23% 14
NW_021161888.1 190 0.27% 18
NW_021161902.1 470 0.73% 46
NW_021161927.1 20 0.03% 2
NW_021161934.1 80 0.11% 8
NW_021161939.1 470 0.62% 41
NW_021161954.1 120 0.16% 12
NW_021161955.1 60 0.08% 6
NW_021161956.1 410 0.54% 38
NW_021161958.1 320 0.41% 32
NW_021161961.1 910 1.16% 83
NW_021161962.1 20 0.03% 2
NW_021161965.1 520 0.66% 46
NW_021161996.1 100 0.12% 10
NW_021162004.1 20 0.07% 2
NW_021162007.1 110 0.13% 11
NW_021162009.1 1990 2.28% 182
NW_021162025.1 80 0.09% 8
NW_021162035.1 60 0.06% 6
NW_021162047.1 60 0.06% 6
NW_021162055.1 250 0.25% 24
NW_021162083.1 650 0.38% 61
NW_021162091.1 480 0.42% 46
NW_021162100.1 640 0.51% 59
NW_021162108.1 340 1.07% 32
NW_021162157.1 40 0.07% 4
NW_021162208.1 20 0.01% 2
NW_021162222.1 20 0.05% 2
NW_021162226.1 20 0.05% 2
NW_021162246.1 460 0.44% 45
NW_021162251.1 700 0.98% 62
NW_021162265.1 130 0.34% 13
NW_021162274.1 580 0.57% 56
NW_021162277.1 20 0.08% 2
NW_021162463.1 20 0.26% 2
NW_021162553.1 20 0.23% 2
NW_021162599.1 130 1.39% 13
NW_021162621.1 20 0.20% 2
NW_021162643.1 320 1.26% 29
NW_021162814.1 20 0.16% 2
NW_021162871.1 20 0.14% 2
2609 contigs with no values (92608671 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 4314376 2 110 10.73 10
global segment-length histogram

Files

Filename Size md5
Monocyte.bw 38.04 MB 52261c889cf33f8b55656cd36b1b2fdd
genomic_resource.yaml 1.09 KB 428965fabfd5cc16c194427a003f3bac
statistics/