Resource

Id summary/johansen2025Crossspecies/pseudobulk_atac/macaque/OPC/bigwigcontent_copy
Type position_score
Version 0
Summary ATAC big wig for OPC cell type from macaque
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • cell_type: OPC
  • data_types: atac_signal
  • dataset: johansen2025Crossspecies
  • modalities: ATAC
  • processing_level: RPKM_normalized
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (1)

ID Type Default annotation Description Histogram Range Summary
johansen2025Crossspecies_atac_macaque_OPC float

johansen2025Crossspecies_atac_macaque_OPC

RPKM?
HISTOGRAM FOR johansen2025Crossspecies_atac_macaque_OPC [0.0385, 198]
n
1,064,822,900
mean
0.118
sd
0.414

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 106482290035.84% 87954767
NC_005943.1 2080 12.56% 205
NC_027914.1 1573770 13.39% 135149
NC_041754.1 91344950 40.85% 7542506
NC_041755.1 72160010 36.78% 5943762
NC_041756.1 69767210 37.65% 5753188
NC_041757.1 60209970 35.43% 4960555
NC_041758.1 57734230 30.82% 4766925
NC_041759.1 62093270 34.67% 5122299
NC_041760.1 68128610 40.11% 5614074
NC_041761.1 53468330 36.70% 4395856
NC_041762.1 51646090 38.51% 4248466
NC_041763.1 45662300 45.88% 3776913
NC_041764.1 50652730 38.07% 4175590
NC_041765.1 48023540 36.93% 3948113
NC_041766.1 42268370 38.87% 3477739
NC_041767.1 53448010 41.74% 4434831
NC_041768.1 43566970 38.46% 3600364
NC_041769.1 38357930 48.17% 3193066
NC_041770.1 32571480 34.13% 2676932
NC_041771.1 26683290 35.83% 2190559
NC_041772.1 27683700 47.47% 2324104
NC_041773.1 34351805 44.53% 2850915
NC_041774.1 31238890 20.37% 2635474
NW_021160097.1 560 1.51% 54
NW_021160098.1 2150 5.38% 187
NW_021160099.1 510 1.26% 49
NW_021160102.1 2800 5.58% 240
NW_021160105.1 1620 2.95% 139
NW_021160106.1 3430 6.18% 299
NW_021160107.1 1340 2.41% 112
NW_021160109.1 9710 11.80% 814
NW_021160110.1 15610 13.21% 1315
NW_021160111.1 12675 9.53% 1095
NW_021160113.1 47240 40.61% 4090
NW_021160114.1 9000 13.65% 756
NW_021160116.1 710 2.01% 66
NW_021160121.1 3140 3.64% 283
NW_021160122.1 5900 6.41% 518
NW_021160123.1 7200 13.60% 632
NW_021160125.1 150 0.59% 15
NW_021160136.1 4370 7.31% 377
NW_021160140.1 10560 8.11% 914
NW_021160141.1 7410 5.52% 661
NW_021160142.1 12440 26.02% 994
NW_021160144.1 98690 8.02% 9041
NW_021160145.1 1190 4.43% 105
NW_021160147.1 1540 5.13% 136
NW_021160148.1 6180 18.01% 510
NW_021160150.1 3240 8.64% 290
NW_021160155.1 3660 6.71% 303
NW_021160158.1 5390 7.15% 449
NW_021160159.1 6890 8.03% 600
NW_021160161.1 62882 8.52% 5317
NW_021160167.1 520 1.37% 46
NW_021160168.1 380 0.91% 36
NW_021160175.1 63970 34.55% 5103
NW_021160179.1 900 2.32% 87
NW_021160182.1 8010 13.79% 703
NW_021160184.1 7810 12.74% 656
NW_021160185.1 1430 2.30% 135
NW_021160186.1 8080 12.53% 683
NW_021160187.1 1050 1.37% 99
NW_021160188.1 4200 5.06% 358
NW_021160189.1 15020 14.82% 1270
NW_021160190.1 2140 5.99% 190
NW_021160191.1 2460 8.83% 216
NW_021160193.1 60 0.19% 6
NW_021160196.1 17795 38.60% 1493
NW_021160197.1 3510 6.77% 312
NW_021160199.1 2210 3.95% 203
NW_021160200.1 2710 4.59% 240
NW_021160201.1 4290 6.98% 368
NW_021160202.1 2870 4.38% 245
NW_021160203.1 6860 9.50% 582
NW_021160204.1 5750 7.89% 512
NW_021160205.1 900 1.23% 84
NW_021160206.1 4010 4.79% 346
NW_021160207.1 7290 7.38% 622
NW_021160209.1 21460 3.20% 1799
NW_021160211.1 6790 5.09% 583
NW_021160220.1 11680 17.51% 970
NW_021160221.1 4780 6.75% 429
NW_021160222.1 1290 1.69% 121
NW_021160223.1 12870 15.45% 1095
NW_021160225.1 4120 7.65% 348
NW_021160226.1 2710 7.52% 235
NW_021160228.1 2000 4.18% 173
NW_021160229.1 2930 6.11% 269
NW_021160231.1 2930 5.38% 251
NW_021160233.1 2970 4.59% 244
NW_021160234.1 16160 24.65% 1392
NW_021160236.1 3450 4.43% 297
NW_021160237.1 10270 11.98% 891
NW_021160238.1 10880 10.42% 950
NW_021160239.1 1730 5.93% 150
NW_021160242.1 1870 6.33% 164
NW_021160243.1 1080 3.43% 93
NW_021160244.1 18920 53.72% 1665
NW_021160245.1 2640 6.03% 240
NW_021160248.1 1860 2.49% 160
NW_021160249.1 5770 7.62% 484
NW_021160250.1 1640 2.55% 135
NW_021160251.1 11770 13.94% 969
NW_021160252.1 25260 28.50% 2112
NW_021160255.1 2200 7.84% 186
NW_021160263.1 1230 2.34% 107
NW_021160266.1 890 1.19% 83
NW_021160268.1 1750 2.58% 159
NW_021160270.1 2860 8.21% 234
NW_021160271.1 2220 6.39% 192
NW_021160272.1 4210 12.03% 349
NW_021160273.1 1240 3.08% 108
NW_021160277.1 710 1.58% 66
NW_021160278.1 4540 8.16% 390
NW_021160279.1 7020 10.64% 592
NW_021160282.1 10840 8.76% 917
NW_021160284.1 1330 3.82% 107
NW_021160285.1 2340 5.25% 202
NW_021160291.1 810 1.79% 75
NW_021160293.1 6590 12.47% 554
NW_021160294.1 11860 14.89% 1018
NW_021160295.1 5230 6.34% 457
NW_021160297.1 6280 11.17% 520
NW_021160298.1 2010 7.38% 169
NW_021160300.1 8130 13.06% 675
NW_021160305.1 660 1.64% 63
NW_021160306.1 2530 6.41% 212
NW_021160307.1 4460 8.47% 399
NW_021160308.1 4730 8.77% 408
NW_021160310.1 18500 31.75% 1574
NW_021160311.1 14920 18.95% 1272
NW_021160312.1 13120 14.84% 1109
NW_021160313.1 11790 12.46% 992
NW_021160319.1 3500 8.06% 306
NW_021160320.1 3650 6.95% 300
NW_021160324.1 7590 11.93% 636
NW_021160325.1 4080 6.26% 340
NW_021160326.1 4190 6.43% 365
NW_021160327.1 6510 9.87% 570
NW_021160328.1 11950 18.87% 1013
NW_021160329.1 4620 8.60% 384
NW_021160338.1 670 1.79% 64
NW_021160339.1 780 2.02% 70
NW_021160341.1 2110 4.56% 186
NW_021160347.1 16320 9.87% 1386
NW_021160353.1 9810 23.82% 840
NW_021160354.1 2790 6.65% 237
NW_021160355.1 3670 6.61% 314
NW_021160356.1 2910 3.81% 258
NW_021160357.1 680 2.23% 60
NW_021160358.1 5060 12.82% 416
NW_021160359.1 4090 9.96% 339
NW_021160361.1 1980 4.21% 176
NW_021160362.1 1690 3.15% 151
NW_021160363.1 7140 11.72% 608
NW_021160364.1 5120 8.28% 432
NW_021160365.1 4920 7.41% 432
NW_021160366.1 10290 14.44% 880
NW_021160367.1 12850 16.82% 1089
NW_021160368.1 1680 2.13% 140
NW_021160369.1 810 0.99% 75
NW_021160370.1 11540 12.89% 980
NW_021160371.1 2180 2.41% 203
NW_021160372.1 13370 9.95% 1143
NW_021160373.1 5580 9.60% 464
NW_021160374.1 13280 10.68% 1119
NW_021160375.1 22320 12.14% 1891
NW_021160376.1 44080 5.11% 3934
NW_021160381.1 760 1.56% 67
NW_021160383.1 10337 14.98% 865
NW_021160384.1 1660 2.08% 150
NW_021160401.1 1560 9.59% 135
NW_021160410.1 5700 34.64% 468
NW_021160417.1 2000 3.53% 166
NW_021160452.1 1400 8.27% 123
NW_021160482.1 40 0.23% 4
NW_021160484.1 1670 9.60% 140
NW_021160495.1 33100 4.02% 2996
NW_021160514.1 1630 9.05% 145
NW_021160523.1 610 3.37% 55
NW_021160525.1 600 3.31% 56
NW_021160535.1 1680 9.17% 140
NW_021160549.1 2320 12.50% 190
NW_021160573.1 3480 18.28% 287
NW_021160589.1 40 0.21% 4
NW_021160606.1 45860 4.56% 3974
NW_021160623.1 1110 5.61% 88
NW_021160625.1 120 0.61% 12
NW_021160629.1 440 2.21% 36
NW_021160635.1 250 1.24% 23
NW_021160655.1 2540 12.35% 225
NW_021160656.1 420 2.05% 39
NW_021160678.1 200 0.96% 19
NW_021160682.1 10205 49.24% 856
NW_021160688.1 3660 17.92% 310
NW_021160701.1 4700 22.15% 409
NW_021160725.1 940 4.34% 81
NW_021160726.1 11900 54.72% 1088
NW_021160734.1 330 1.52% 30
NW_021160737.1 20 0.09% 2
NW_021160757.1 70 0.32% 5
NW_021160770.1 10950 48.38% 985
NW_021160772.1 2020 8.91% 172
NW_021160805.1 7460 31.82% 639
NW_021160821.1 270 1.13% 25
NW_021160827.1 44660 6.09% 3742
NW_021160832.1 340 1.41% 31
NW_021160834.1 1080 4.48% 100
NW_021160848.1 110 0.45% 10
NW_021160868.1 60 0.25% 6
NW_021160890.1 1270 5.03% 114
NW_021160903.1 4480 16.91% 355
NW_021160919.1 690 2.65% 55
NW_021160925.1 400 1.53% 34
NW_021160946.1 1950 7.37% 175
NW_021160955.1 1250 4.71% 109
NW_021160961.1 650 2.43% 60
NW_021160976.1 3600 13.23% 310
NW_021160983.1 160 0.59% 12
NW_021160986.1 40 0.15% 4
NW_021161033.1 40 0.14% 4
NW_021161038.1 2760 10.20% 232
NW_021161041.1 780 2.74% 71
NW_021161043.1 100 0.34% 10
NW_021161046.1 3880 13.15% 339
NW_021161062.1 670 2.26% 55
NW_021161066.1 6620 22.19% 525
NW_021161106.1 2150 7.01% 183
NW_021161107.1 690 2.24% 54
NW_021161113.1 2050 6.08% 183
NW_021161114.1 4310 13.97% 380
NW_021161131.1 60 0.19% 6
NW_021161133.1 3030 2.04% 276
NW_021161138.1 230 0.74% 22
NW_021161152.1 2120 6.74% 180
NW_021161164.1 2010 6.22% 169
NW_021161166.1 3800 11.69% 335
NW_021161184.1 410 1.39% 37
NW_021161201.1 1500 4.52% 127
NW_021161211.1 1630 4.89% 148
NW_021161213.1 250 0.75% 23
NW_021161224.1 3740 11.10% 321
NW_021161226.1 3300 9.90% 281
NW_021161241.1 260 0.76% 26
NW_021161247.1 20 0.06% 2
NW_021161253.1 50 0.14% 5
NW_021161261.1 1390 3.98% 123
NW_021161269.1 4630 13.19% 395
NW_021161274.1 20 0.06% 2
NW_021161282.1 16820 43.27% 1487
NW_021161303.1 620 1.72% 58
NW_021161305.1 340 0.94% 31
NW_021161307.1 620 2.34% 58
NW_021161312.1 200 0.56% 20
NW_021161320.1 3910 3.98% 333
NW_021161336.1 1870 5.07% 161
NW_021161338.1 460 1.24% 45
NW_021161340.1 1960 5.33% 160
NW_021161348.1 2970 7.93% 253
NW_021161355.1 3300 8.54% 288
NW_021161360.1 400 1.07% 34
NW_021161364.1 1990 5.21% 157
NW_021161377.1 6400 16.10% 535
NW_021161379.1 280 0.73% 26
NW_021161380.1 160 0.50% 16
NW_021161385.1 360 0.93% 35
NW_021161392.1 6250 15.98% 542
NW_021161394.1 3220 8.29% 267
NW_021161396.1 40 0.10% 4
NW_021161399.1 2420 11.04% 207
NW_021161404.1 990 2.51% 90
NW_021161413.1 2830 7.14% 240
NW_021161421.1 150 0.38% 13
NW_021161422.1 230 0.58% 18
NW_021161427.1 1440 3.59% 123
NW_021161433.1 590 1.46% 56
NW_021161437.1 500 1.66% 48
NW_021161446.1 880 2.15% 79
NW_021161463.1 110 0.26% 11
NW_021161468.1 1070 2.55% 99
NW_021161470.1 520 1.24% 49
NW_021161483.1 60 0.14% 6
NW_021161486.1 3930 9.23% 321
NW_021161494.1 510 1.19% 44
NW_021161497.1 590 1.37% 51
NW_021161505.1 2530 5.87% 207
NW_021161507.1 1980 4.57% 177
NW_021161508.1 7800 18.07% 648
NW_021161519.1 4100 9.35% 353
NW_021161520.1 4890 11.35% 443
NW_021161523.1 1600 3.70% 143
NW_021161525.1 6500 14.76% 528
NW_021161526.1 2800 6.36% 242
NW_021161532.1 470 1.06% 45
NW_021161535.1 1140 2.55% 101
NW_021161537.1 6580 14.83% 547
NW_021161545.1 8750 19.58% 720
NW_021161552.1 560 1.32% 53
NW_021161554.1 2250 4.98% 198
NW_021161561.1 4100 9.07% 349
NW_021161562.1 5880 12.93% 461
NW_021161567.1 1530 3.36% 124
NW_021161570.1 150 0.33% 14
NW_021161582.1 4280 9.32% 358
NW_021161585.1 6380 13.84% 542
NW_021161590.1 12520 27.21% 999
NW_021161593.1 6920 14.87% 577
NW_021161596.1 31260 5.80% 2642
NW_021161601.1 1910 4.06% 172
NW_021161608.1 820 1.76% 73
NW_021161609.1 490 1.04% 41
NW_021161614.1 2480 5.20% 207
NW_021161616.1 2900 6.06% 264
NW_021161617.1 150 0.31% 14
NW_021161627.1 3270 9.78% 276
NW_021161633.1 13770 27.87% 1122
NW_021161642.1 1320 2.65% 122
NW_021161648.1 17980 35.34% 1583
NW_021161679.1 3780 7.25% 321
NW_021161680.1 1940 3.75% 165
NW_021161686.1 10610 7.84% 920
NW_021161694.1 1150 2.53% 101
NW_021161695.1 2920 5.46% 252
NW_021161696.1 1240 2.34% 111
NW_021161699.1 4940 10.22% 404
NW_021161700.1 360 0.68% 34
NW_021161713.1 680 1.26% 63
NW_021161715.1 160 0.29% 14
NW_021161718.1 7670 14.08% 644
NW_021161725.1 2200 6.99% 191
NW_021161737.1 1790 3.20% 159
NW_021161743.1 600 1.07% 55
NW_021161747.1 300 0.53% 24
NW_021161754.1 13180 23.05% 1117
NW_021161759.1 350 0.61% 34
NW_021161767.1 4450 4.36% 384
NW_021161769.1 2050 3.54% 175
NW_021161772.1 3250 4.40% 272
NW_021161784.1 1240 24.09% 108
NW_021161790.1 22140 36.69% 1866
NW_021161794.1 2080 3.44% 179
NW_021161796.1 1420 2.35% 128
NW_021161798.1 2320 4.93% 182
NW_021161830.1 2080 4.65% 193
NW_021161832.1 1150 1.81% 99
NW_021161839.1 1510 2.36% 132
NW_021161842.1 2590 3.97% 241
NW_021161843.1 1640 2.52% 149
NW_021161845.1 12840 19.63% 1089
NW_021161850.1 136121 12.18% 11659
NW_021161853.1 7130 10.80% 615
NW_021161857.1 2170 3.27% 203
NW_021161862.1 2590 3.91% 224
NW_021161876.1 6320 9.26% 554
NW_021161878.1 4390 6.46% 381
NW_021161881.1 6070 10.08% 503
NW_021161888.1 5730 8.25% 495
NW_021161902.1 4980 7.68% 426
NW_021161927.1 3130 4.18% 269
NW_021161934.1 4700 6.24% 387
NW_021161939.1 8690 11.47% 755
NW_021161954.1 3740 4.85% 330
NW_021161955.1 4740 6.12% 388
NW_021161956.1 10850 14.21% 912
NW_021161958.1 12260 15.61% 1010
NW_021161961.1 6220 7.95% 547
NW_021161962.1 960 1.20% 81
NW_021161965.1 3460 4.38% 306
NW_021161996.1 3130 3.64% 264
NW_021162004.1 1100 3.87% 95
NW_021162007.1 4330 4.93% 364
NW_021162009.1 28970 33.23% 2475
NW_021162025.1 3810 4.27% 334
NW_021162035.1 3040 3.26% 281
NW_021162047.1 4940 5.16% 436
NW_021162055.1 8470 8.51% 727
NW_021162083.1 9220 5.35% 825
NW_021162091.1 11120 9.81% 911
NW_021162100.1 11520 9.17% 1000
NW_021162108.1 10420 32.69% 851
NW_021162157.1 1080 1.79% 99
NW_021162208.1 1360 0.55% 124
NW_021162222.1 2850 7.53% 255
NW_021162226.1 1740 3.99% 156
NW_021162246.1 19140 18.12% 1598
NW_021162251.1 13490 18.89% 1146
NW_021162253.1 100 0.32% 10
NW_021162263.1 550 2.08% 49
NW_021162265.1 7970 20.62% 640
NW_021162274.1 28850 28.41% 2418
NW_021162277.1 1410 5.67% 122
NW_021162460.1 60 0.80% 5
NW_021162463.1 360 4.77% 32
NW_021162495.1 480 7.29% 44
NW_021162553.1 330 3.81% 31
NW_021162593.1 240 2.58% 24
NW_021162599.1 3520 37.55% 281
NW_021162621.1 590 6.04% 48
NW_021162643.1 6010 23.65% 499
NW_021162814.1 240 1.94% 23
NW_021162871.1 590 4.25% 43
NW_021163002.1 60 0.38% 6
2537 contigs with no values (90187772 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 87954767 2 160 12.11 10
global segment-length histogram

Files

Filename Size md5
OPC.bw 581.25 MB eedd29cc46afa7cddd0ca088fb21d4ff
genomic_resource.yaml 1.07 KB 32a037638961c7fe466815ac50890e41
statistics/