Resource

Id summary/johansen2025Crossspecies/pseudobulk_atac/macaque/Pericyte/bigwigcontent_copy
Type position_score
Version 0
Summary ATAC big wig for Pericyte cell type from macaque
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • cell_type: Pericyte
  • data_types: atac_signal
  • dataset: johansen2025Crossspecies
  • modalities: ATAC
  • processing_level: RPKM_normalized
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (1)

ID Type Default annotation Description Histogram Range Summary
johansen2025Crossspecies_atac_macaque_Pericyte float

johansen2025Crossspecies_atac_macaque_Pericyte

RPKM?
HISTOGRAM FOR johansen2025Crossspecies_atac_macaque_Pericyte [0.408, 230]
n
158,923,545
mean
0.637
sd
1.08

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1589235455.35% 14395999
NC_005943.1 1880 11.35% 176
NC_027914.1 176020 1.50% 16974
NC_041754.1 13964650 6.24% 1258222
NC_041755.1 10563120 5.38% 962823
NC_041756.1 10026650 5.41% 911938
NC_041757.1 9322450 5.48% 849308
NC_041758.1 7848190 4.19% 725044
NC_041759.1 8588470 4.80% 786005
NC_041760.1 9845130 5.80% 892484
NC_041761.1 7343400 5.04% 670186
NC_041762.1 7768590 5.79% 702867
NC_041763.1 7194600 7.23% 641665
NC_041764.1 7843790 5.89% 708213
NC_041765.1 6867990 5.28% 626819
NC_041766.1 5998000 5.52% 545034
NC_041767.1 8377470 6.54% 751617
NC_041768.1 6741400 5.95% 608208
NC_041769.1 6820800 8.57% 601730
NC_041770.1 4516310 4.73% 414979
NC_041771.1 3716300 4.99% 340338
NC_041772.1 5671920 9.73% 495353
NC_041773.1 5502890 7.13% 491699
NC_041774.1 3891760 2.54% 363913
NW_021160097.1 20 0.05% 2
NW_021160098.1 310 0.78% 29
NW_021160099.1 60 0.15% 6
NW_021160102.1 240 0.48% 24
NW_021160105.1 120 0.22% 12
NW_021160106.1 450 0.81% 39
NW_021160107.1 180 0.32% 18
NW_021160109.1 1730 2.10% 164
NW_021160110.1 2670 2.26% 238
NW_021160111.1 2930 2.20% 268
NW_021160113.1 12250 10.53% 1039
NW_021160114.1 1210 1.84% 109
NW_021160116.1 660 1.86% 57
NW_021160121.1 260 0.30% 25
NW_021160122.1 1140 1.24% 109
NW_021160123.1 630 1.19% 52
NW_021160125.1 100 0.40% 10
NW_021160136.1 170 0.28% 15
NW_021160140.1 2210 1.70% 202
NW_021160141.1 880 0.66% 86
NW_021160142.1 1110 2.32% 106
NW_021160144.1 20170 1.64% 1966
NW_021160145.1 140 0.52% 13
NW_021160147.1 230 0.77% 23
NW_021160148.1 980 2.86% 87
NW_021160150.1 930 2.48% 81
NW_021160155.1 570 1.05% 53
NW_021160158.1 480 0.64% 45
NW_021160159.1 630 0.73% 60
NW_021160161.1 12760 1.73% 1174
NW_021160167.1 260 0.69% 23
NW_021160168.1 100 0.24% 10
NW_021160175.1 4150 2.24% 404
NW_021160179.1 150 0.39% 15
NW_021160182.1 420 0.72% 40
NW_021160184.1 360 0.59% 31
NW_021160185.1 120 0.19% 12
NW_021160186.1 890 1.38% 81
NW_021160187.1 230 0.30% 23
NW_021160188.1 330 0.40% 32
NW_021160189.1 1070 1.06% 96
NW_021160190.1 220 0.62% 22
NW_021160191.1 420 1.51% 40
NW_021160193.1 40 0.13% 3
NW_021160196.1 1580 3.43% 140
NW_021160197.1 660 1.27% 58
NW_021160199.1 270 0.48% 27
NW_021160200.1 300 0.51% 27
NW_021160201.1 430 0.70% 43
NW_021160202.1 120 0.18% 12
NW_021160203.1 690 0.96% 64
NW_021160204.1 430 0.59% 43
NW_021160205.1 100 0.14% 10
NW_021160206.1 420 0.50% 39
NW_021160207.1 840 0.85% 81
NW_021160209.1 2380 0.36% 233
NW_021160211.1 960 0.72% 87
NW_021160220.1 360 0.54% 34
NW_021160221.1 400 0.56% 37
NW_021160222.1 250 0.33% 23
NW_021160223.1 2420 2.90% 213
NW_021160225.1 900 1.67% 84
NW_021160226.1 1400 3.89% 124
NW_021160228.1 490 1.02% 43
NW_021160229.1 420 0.88% 41
NW_021160231.1 270 0.50% 24
NW_021160233.1 420 0.65% 41
NW_021160234.1 2970 4.53% 245
NW_021160236.1 430 0.55% 42
NW_021160237.1 2450 2.86% 207
NW_021160238.1 1760 1.69% 163
NW_021160239.1 700 2.40% 61
NW_021160242.1 260 0.88% 23
NW_021160243.1 40 0.13% 4
NW_021160244.1 1440 4.09% 138
NW_021160245.1 390 0.89% 36
NW_021160248.1 160 0.21% 16
NW_021160249.1 1660 2.19% 145
NW_021160250.1 40 0.06% 4
NW_021160251.1 400 0.47% 39
NW_021160252.1 760 0.86% 75
NW_021160255.1 420 1.50% 36
NW_021160263.1 70 0.13% 7
NW_021160266.1 170 0.23% 17
NW_021160268.1 290 0.43% 29
NW_021160270.1 240 0.69% 22
NW_021160271.1 350 1.01% 31
NW_021160272.1 850 2.43% 75
NW_021160273.1 180 0.45% 18
NW_021160277.1 90 0.20% 8
NW_021160278.1 180 0.32% 18
NW_021160279.1 580 0.88% 51
NW_021160282.1 760 0.61% 74
NW_021160285.1 120 0.27% 12
NW_021160291.1 20 0.04% 2
NW_021160293.1 600 1.14% 59
NW_021160294.1 1910 2.40% 179
NW_021160295.1 500 0.61% 48
NW_021160297.1 650 1.16% 63
NW_021160298.1 240 0.88% 22
NW_021160300.1 1180 1.89% 107
NW_021160306.1 160 0.41% 16
NW_021160307.1 490 0.93% 49
NW_021160308.1 560 1.04% 51
NW_021160310.1 4690 8.05% 400
NW_021160311.1 1430 1.82% 132
NW_021160312.1 1800 2.04% 151
NW_021160313.1 460 0.49% 45
NW_021160319.1 300 0.69% 30
NW_021160320.1 230 0.44% 23
NW_021160324.1 1040 1.63% 96
NW_021160325.1 200 0.31% 20
NW_021160326.1 800 1.23% 70
NW_021160327.1 620 0.94% 58
NW_021160328.1 2470 3.90% 222
NW_021160329.1 300 0.56% 30
NW_021160338.1 100 0.27% 10
NW_021160339.1 150 0.39% 14
NW_021160341.1 300 0.65% 29
NW_021160347.1 1540 0.93% 144
NW_021160353.1 400 0.97% 39
NW_021160354.1 280 0.67% 27
NW_021160355.1 510 0.92% 49
NW_021160356.1 240 0.31% 23
NW_021160357.1 130 0.43% 12
NW_021160358.1 750 1.90% 70
NW_021160359.1 490 1.19% 43
NW_021160361.1 120 0.25% 11
NW_021160362.1 510 0.95% 50
NW_021160363.1 1200 1.97% 112
NW_021160364.1 600 0.97% 54
NW_021160365.1 1100 1.66% 106
NW_021160366.1 980 1.38% 92
NW_021160367.1 2520 3.30% 224
NW_021160368.1 120 0.15% 12
NW_021160369.1 210 0.26% 20
NW_021160370.1 920 1.03% 88
NW_021160371.1 120 0.13% 12
NW_021160372.1 2300 1.71% 195
NW_021160373.1 820 1.41% 69
NW_021160374.1 1580 1.27% 149
NW_021160375.1 2100 1.14% 196
NW_021160376.1 6630 0.77% 642
NW_021160381.1 20 0.04% 2
NW_021160383.1 3150 4.57% 287
NW_021160384.1 200 0.25% 19
NW_021160401.1 140 0.86% 14
NW_021160410.1 600 3.65% 54
NW_021160417.1 220 0.39% 21
NW_021160452.1 200 1.18% 19
NW_021160484.1 160 0.92% 16
NW_021160495.1 5840 0.71% 562
NW_021160514.1 120 0.67% 12
NW_021160525.1 60 0.33% 5
NW_021160535.1 200 1.09% 19
NW_021160549.1 60 0.32% 6
NW_021160573.1 740 3.89% 70
NW_021160606.1 8880 0.88% 854
NW_021160623.1 80 0.40% 7
NW_021160629.1 40 0.20% 4
NW_021160635.1 20 0.10% 2
NW_021160655.1 370 1.80% 35
NW_021160656.1 60 0.29% 6
NW_021160682.1 1335 6.44% 128
NW_021160688.1 1080 5.29% 81
NW_021160701.1 1200 5.66% 100
NW_021160725.1 20 0.09% 2
NW_021160726.1 5330 24.51% 426
NW_021160770.1 5320 23.51% 433
NW_021160772.1 240 1.06% 22
NW_021160805.1 260 1.11% 25
NW_021160821.1 60 0.25% 6
NW_021160827.1 6070 0.83% 547
NW_021160832.1 20 0.08% 2
NW_021160834.1 240 1.00% 23
NW_021160835.1 20 0.12% 2
NW_021160868.1 20 0.08% 2
NW_021160890.1 80 0.32% 8
NW_021160903.1 420 1.59% 40
NW_021160946.1 510 1.93% 44
NW_021160955.1 40 0.15% 4
NW_021160961.1 60 0.22% 6
NW_021160976.1 240 0.88% 21
NW_021161038.1 610 2.25% 56
NW_021161041.1 120 0.42% 12
NW_021161046.1 1040 3.52% 88
NW_021161062.1 60 0.20% 6
NW_021161066.1 520 1.74% 42
NW_021161106.1 300 0.98% 30
NW_021161107.1 120 0.39% 9
NW_021161113.1 320 0.95% 32
NW_021161114.1 1440 4.67% 121
NW_021161131.1 20 0.06% 2
NW_021161133.1 470 0.32% 46
NW_021161152.1 310 0.99% 31
NW_021161164.1 350 1.08% 30
NW_021161166.1 720 2.22% 67
NW_021161184.1 40 0.14% 4
NW_021161201.1 230 0.69% 21
NW_021161211.1 100 0.30% 10
NW_021161224.1 520 1.54% 52
NW_021161226.1 630 1.89% 52
NW_021161241.1 60 0.17% 6
NW_021161261.1 200 0.57% 19
NW_021161269.1 330 0.94% 32
NW_021161282.1 1480 3.81% 129
NW_021161303.1 60 0.17% 6
NW_021161305.1 20 0.06% 2
NW_021161307.1 40 0.15% 4
NW_021161312.1 20 0.06% 2
NW_021161320.1 370 0.38% 37
NW_021161336.1 120 0.33% 11
NW_021161338.1 20 0.05% 2
NW_021161340.1 80 0.22% 8
NW_021161348.1 230 0.61% 23
NW_021161355.1 560 1.45% 48
NW_021161360.1 80 0.21% 8
NW_021161364.1 340 0.89% 31
NW_021161377.1 1070 2.69% 99
NW_021161379.1 20 0.05% 2
NW_021161385.1 40 0.10% 4
NW_021161392.1 1430 3.66% 118
NW_021161394.1 60 0.15% 6
NW_021161399.1 330 1.51% 31
NW_021161404.1 120 0.30% 12
NW_021161413.1 280 0.71% 28
NW_021161421.1 60 0.15% 6
NW_021161427.1 160 0.40% 16
NW_021161433.1 60 0.15% 6
NW_021161437.1 40 0.13% 4
NW_021161446.1 80 0.20% 8
NW_021161463.1 20 0.05% 2
NW_021161468.1 200 0.48% 20
NW_021161470.1 20 0.05% 2
NW_021161486.1 910 2.14% 81
NW_021161494.1 40 0.09% 4
NW_021161497.1 20 0.05% 2
NW_021161505.1 260 0.60% 22
NW_021161507.1 560 1.29% 52
NW_021161508.1 730 1.69% 70
NW_021161519.1 330 0.75% 32
NW_021161520.1 2010 4.66% 183
NW_021161523.1 130 0.30% 13
NW_021161525.1 400 0.91% 40
NW_021161526.1 300 0.68% 29
NW_021161532.1 40 0.09% 4
NW_021161535.1 210 0.47% 18
NW_021161537.1 1430 3.22% 125
NW_021161545.1 1820 4.07% 158
NW_021161552.1 20 0.05% 2
NW_021161554.1 220 0.49% 21
NW_021161561.1 840 1.86% 81
NW_021161562.1 870 1.91% 79
NW_021161567.1 20 0.04% 2
NW_021161570.1 30 0.07% 3
NW_021161582.1 650 1.41% 60
NW_021161585.1 1190 2.58% 115
NW_021161590.1 2640 5.74% 233
NW_021161593.1 1250 2.69% 117
NW_021161596.1 5440 1.01% 506
NW_021161601.1 350 0.74% 33
NW_021161608.1 60 0.13% 6
NW_021161609.1 120 0.26% 12
NW_021161614.1 60 0.13% 6
NW_021161616.1 1610 3.36% 146
NW_021161627.1 200 0.60% 20
NW_021161633.1 2780 5.63% 248
NW_021161642.1 80 0.16% 8
NW_021161648.1 3960 7.78% 337
NW_021161679.1 170 0.33% 17
NW_021161680.1 320 0.62% 30
NW_021161686.1 2020 1.49% 173
NW_021161694.1 160 0.35% 16
NW_021161695.1 320 0.60% 32
NW_021161696.1 150 0.28% 15
NW_021161699.1 530 1.10% 52
NW_021161713.1 20 0.04% 2
NW_021161715.1 20 0.04% 2
NW_021161718.1 740 1.36% 73
NW_021161725.1 180 0.57% 18
NW_021161737.1 210 0.38% 14
NW_021161743.1 20 0.04% 2
NW_021161747.1 20 0.04% 2
NW_021161754.1 1430 2.50% 130
NW_021161767.1 310 0.30% 29
NW_021161769.1 280 0.48% 28
NW_021161772.1 180 0.24% 18
NW_021161784.1 110 2.14% 11
NW_021161790.1 860 1.43% 81
NW_021161794.1 180 0.30% 18
NW_021161796.1 240 0.40% 23
NW_021161798.1 510 1.08% 44
NW_021161830.1 260 0.58% 26
NW_021161832.1 160 0.25% 16
NW_021161839.1 210 0.33% 19
NW_021161842.1 220 0.34% 22
NW_021161843.1 250 0.38% 25
NW_021161845.1 3540 5.41% 313
NW_021161850.1 29710 2.66% 2780
NW_021161853.1 1120 1.70% 105
NW_021161857.1 180 0.27% 18
NW_021161862.1 160 0.24% 16
NW_021161876.1 700 1.03% 69
NW_021161878.1 660 0.97% 65
NW_021161881.1 1270 2.11% 121
NW_021161888.1 850 1.22% 74
NW_021161902.1 660 1.02% 62
NW_021161927.1 260 0.35% 25
NW_021161934.1 530 0.70% 50
NW_021161939.1 1740 2.30% 157
NW_021161954.1 640 0.83% 61
NW_021161955.1 280 0.36% 26
NW_021161956.1 2610 3.42% 214
NW_021161958.1 840 1.07% 83
NW_021161961.1 1030 1.32% 95
NW_021161962.1 140 0.18% 14
NW_021161965.1 750 0.95% 70
NW_021161996.1 280 0.33% 25
NW_021162004.1 80 0.28% 7
NW_021162007.1 1050 1.19% 99
NW_021162009.1 5700 6.54% 511
NW_021162025.1 750 0.84% 71
NW_021162035.1 180 0.19% 17
NW_021162047.1 200 0.21% 20
NW_021162055.1 1120 1.13% 103
NW_021162083.1 1080 0.63% 101
NW_021162091.1 1600 1.41% 141
NW_021162100.1 3270 2.60% 269
NW_021162108.1 830 2.60% 74
NW_021162157.1 310 0.51% 27
NW_021162208.1 190 0.08% 19
NW_021162222.1 180 0.48% 18
NW_021162226.1 350 0.80% 33
NW_021162246.1 1730 1.64% 167
NW_021162251.1 1520 2.13% 140
NW_021162263.1 100 0.38% 10
NW_021162265.1 830 2.15% 78
NW_021162274.1 2760 2.72% 252
NW_021162277.1 340 1.37% 30
NW_021162463.1 60 0.79% 6
NW_021162495.1 20 0.30% 2
NW_021162599.1 490 5.23% 42
NW_021162621.1 40 0.41% 4
NW_021162643.1 930 3.66% 84
NW_021162814.1 110 0.89% 11
NW_021162871.1 70 0.50% 7
2570 contigs with no values (91147605 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 14395999 5 130 11.04 10
global segment-length histogram

Files

Filename Size md5
Pericyte.bw 86.87 MB 89130775a67f0e8b04acec2f5f9b0de9
genomic_resource.yaml 1.09 KB 764cc49684419a965506c4045d28d539
statistics/