Resource

Id	summary/liu2026Multiomics/atac_fragments/T106_b13_Eye_PCW17content_copy
Type	fragment_score
Version	0
Summary	Sample ATAC fragments for T106_b13_Eye_PCW17 from liu2026Multiomics.
Description
Labels	assay: SHARE-seq cell_meta_resource_id: summary/liu2026Multiomics/SHARE_seq_cell_meta_data data_types: fragments dataset: liu2026Multiomics exp_batch: 13 modalities: ATAC organ: Eye pcw_age: 17 processing_level: aligned reference_genome: reference/Human/genome/ucsc-hg38 resolution: single_cell sample_id: T106_b13_Eye_PCW17 sequencing_platform: Illumina species: human tissue_storage_code: T106 vendor: unknown

Scores (2)

ID	Type	Default annotation	Description	Histogram	Range	Summary
cell	str	cell			CL94_A10+H06+F09, CL92_A12+C09+E01, CL92_A05+B06+C04, CL93_A08+H07+H09, CL95_A10+B06+C03 (top 5 of 884736 values)
count	int	count			[1, 27]	n 528,230,962 mean 1.67 sd 1.19

n counts fragments; sd is the population standard deviation.

Fragments

Chromosome	Fragments
all chromosomes	528230962
chr1	43206337
chr1_KI270706v1_random	2019
chr1_KI270707v1_random	263
chr1_KI270708v1_random	892
chr1_KI270709v1_random	11153
chr1_KI270710v1_random	676
chr1_KI270711v1_random	3504
chr1_KI270712v1_random	4524
chr1_KI270713v1_random	8875
chr1_KI270714v1_random	4216
chr2	43130717
chr2_KI270715v1_random	229
chr2_KI270716v1_random	1355
chr3	35993476
chr3_GL000221v1_random	1968
chr4	32992117
chr4_GL000008v2_random	13025
chr5	31632335
chr5_GL000208v1_random	7487
chr6	30912476
chr7	28597288
chr8	25660259
chr9	21127458
chr9_KI270717v1_random	445
chr9_KI270718v1_random	996
chr9_KI270719v1_random	8386
chr9_KI270720v1_random	4678
chr10	23997724
chr11	26019413
chr11_KI270721v1_random	534
chr12	25406854
chr13	16426413
chr14	16378569
chr14_GL000009v2_random	12309
chr14_GL000194v1_random	11928
chr14_GL000225v1_random	56845
chr14_KI270722v1_random	11293
chr14_KI270723v1_random	5002
chr14_KI270724v1_random	1787
chr14_KI270725v1_random	5679
chr14_KI270726v1_random	169
chr15	14365590
chr15_KI270727v1_random	2414
chr16	15665430
chr16_KI270728v1_random	2157
chr17	16987090
chr17_GL000205v2_random	41940
chr17_KI270729v1_random	26578
chr17_KI270730v1_random	7698
chr18	13256692
chr19	14166795
chr20	12023712
chr21	6198788
chr22	7634040
chr22_KI270731v1_random	694
chr22_KI270732v1_random	6714
chr22_KI270733v1_random	25901
chr22_KI270734v1_random	604
chr22_KI270735v1_random	8288
chr22_KI270736v1_random	18205
chr22_KI270737v1_random	3328
chr22_KI270738v1_random	9626
chr22_KI270739v1_random	205
chrM	3648029
chrUn_GL000195v1	18696
chrUn_GL000213v1	1117
chrUn_GL000214v1	4001
chrUn_GL000216v2	10546
chrUn_GL000218v1	13140
chrUn_GL000219v1	21803
chrUn_GL000220v1	6346
chrUn_GL000224v1	21217
chrUn_GL000226v1	17
chrUn_KI270302v1	40
chrUn_KI270303v1	40
chrUn_KI270304v1	30
chrUn_KI270305v1	33
chrUn_KI270310v1	46
chrUn_KI270311v1	72
chrUn_KI270312v1	2
chrUn_KI270315v1	8
chrUn_KI270316v1	8
chrUn_KI270317v1	10
chrUn_KI270320v1	272
chrUn_KI270322v1	211
chrUn_KI270329v1	14
chrUn_KI270330v1	743
chrUn_KI270333v1	268
chrUn_KI270336v1	176
chrUn_KI270337v1	275
chrUn_KI270362v1	93
chrUn_KI270363v1	54
chrUn_KI270364v1	3
chrUn_KI270366v1	73
chrUn_KI270371v1	1
chrUn_KI270374v1	2
chrUn_KI270378v1	14
chrUn_KI270381v1	1
chrUn_KI270382v1	36
chrUn_KI270383v1	1
chrUn_KI270384v1	3
chrUn_KI270385v1	5
chrUn_KI270387v1	1
chrUn_KI270388v1	1
chrUn_KI270389v1	16
chrUn_KI270390v1	11
chrUn_KI270391v1	4
chrUn_KI270392v1	4
chrUn_KI270393v1	9
chrUn_KI270394v1	8
chrUn_KI270395v1	14
chrUn_KI270396v1	3
chrUn_KI270411v1	28
chrUn_KI270412v1	24
chrUn_KI270414v1	11
chrUn_KI270417v1	226
chrUn_KI270418v1	23
chrUn_KI270419v1	11
chrUn_KI270420v1	131
chrUn_KI270422v1	77
chrUn_KI270423v1	13
chrUn_KI270424v1	13
chrUn_KI270425v1	8
chrUn_KI270429v1	339
chrUn_KI270435v1	8600
chrUn_KI270438v1	104327
chrUn_KI270442v1	58243
chrUn_KI270448v1	1190
chrUn_KI270465v1	244
chrUn_KI270466v1	3688
chrUn_KI270467v1	17348
chrUn_KI270468v1	686
chrUn_KI270507v1	1126
chrUn_KI270508v1	495
chrUn_KI270509v1	434
chrUn_KI270510v1	351
chrUn_KI270511v1	946
chrUn_KI270512v1	1655
chrUn_KI270515v1	1365
chrUn_KI270516v1	246
chrUn_KI270517v1	686
chrUn_KI270518v1	403
chrUn_KI270519v1	12575
chrUn_KI270521v1	424
chrUn_KI270522v1	271
chrUn_KI270528v1	12
chrUn_KI270529v1	28
chrUn_KI270530v1	25
chrUn_KI270538v1	9190
chrUn_KI270539v1	134
chrUn_KI270544v1	28
chrUn_KI270579v1	69
chrUn_KI270580v1	361
chrUn_KI270581v1	8
chrUn_KI270582v1	117
chrUn_KI270583v1	334
chrUn_KI270584v1	952
chrUn_KI270587v1	2570
chrUn_KI270588v1	1090
chrUn_KI270589v1	1360
chrUn_KI270590v1	929
chrUn_KI270591v1	1456
chrUn_KI270593v1	353
chrUn_KI270741v1	249
chrUn_KI270742v1	8901
chrUn_KI270743v1	4518
chrUn_KI270744v1	21025
chrUn_KI270745v1	523
chrUn_KI270746v1	9576
chrUn_KI270747v1	985
chrUn_KI270748v1	343
chrUn_KI270749v1	9917
chrUn_KI270750v1	12017
chrUn_KI270751v1	12439
chrUn_KI270753v1	1156
chrUn_KI270754v1	2477
chrUn_KI270755v1	692
chrUn_KI270756v1	3422
chrUn_KI270757v1	5051
chrX	21973194
chrY	67556
chrY_KI270740v1_random	19

Fragment lengths

	fragments	min	max	mean	median
fragments	528230962	7	1992	275.87	202

Files

Filename	Size	md5
T106_b13_Eye_PCW17.fragments.tsv.gz	4.99 GB	01cb672457f88909c510d861904236e6
T106_b13_Eye_PCW17.fragments.tsv.gz.tbi	1.41 MB	b324d8a4f0fb8e6450efaf3d6e15eedb
fragment_count_dist_plot.py	853.0 B	9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml	1.43 KB	08fd90e28da10d439502fa093a5662ec
statistics/