Resource
| Id | summary/liu2026Multiomics/atac_fragments/T136_b16_Thyroid_PCW21 |
|---|---|
| Type | fragment_score |
| Version | 0 |
| Summary | Sample ATAC fragments for T136_b16_Thyroid_PCW21 from liu2026Multiomics. |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Genomic coordinates in fragment files are 0-based. |
| Labels |
|
Scores (2)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| cell | str |
cell |
 |
CL131_G12+C02+E04, CL131_G02+C12+C12, CL131_G05+C08+B08, CL131_G03+H10+C10, CL131_G12+C01+A01 (top 5 of 210638 values) | ||
| count | int |
count |
 |
[1, 89] |
|
n counts fragments; sd is the population standard deviation.
Fragments
| Chromosome | Fragments |
|---|---|
| all chromosomes | 46728444 |
| chr1 | 4083868 |
| chr1_KI270706v1_random | 734 |
| chr1_KI270707v1_random | 119 |
| chr1_KI270708v1_random | 445 |
| chr1_KI270709v1_random | 612 |
| chr1_KI270710v1_random | 168 |
| chr1_KI270711v1_random | 245 |
| chr1_KI270712v1_random | 493 |
| chr1_KI270713v1_random | 888 |
| chr1_KI270714v1_random | 113 |
| chr2 | 3692466 |
| chr2_KI270715v1_random | 18 |
| chr2_KI270716v1_random | 90 |
| chr3 | 3088123 |
| chr3_GL000221v1_random | 158 |
| chr4 | 2547225 |
| chr4_GL000008v2_random | 883 |
| chr5 | 2535105 |
| chr5_GL000208v1_random | 353 |
| chr6 | 2626410 |
| chr7 | 2425327 |
| chr8 | 2146439 |
| chr9 | 1933637 |
| chr9_KI270717v1_random | 48 |
| chr9_KI270718v1_random | 49 |
| chr9_KI270719v1_random | 655 |
| chr9_KI270720v1_random | 252 |
| chr10 | 2119989 |
| chr11 | 2380020 |
| chr11_KI270721v1_random | 254 |
| chr12 | 2211034 |
| chr13 | 1274894 |
| chr14 | 1503391 |
| chr14_GL000009v2_random | 1162 |
| chr14_GL000194v1_random | 1562 |
| chr14_GL000225v1_random | 1778 |
| chr14_KI270722v1_random | 1410 |
| chr14_KI270723v1_random | 227 |
| chr14_KI270724v1_random | 312 |
| chr14_KI270725v1_random | 475 |
| chr14_KI270726v1_random | 147 |
| chr15 | 1315117 |
| chr15_KI270727v1_random | 204 |
| chr16 | 1558350 |
| chr16_KI270728v1_random | 208 |
| chr17 | 1949011 |
| chr17_GL000205v2_random | 3955 |
| chr17_KI270729v1_random | 1660 |
| chr17_KI270730v1_random | 353 |
| chr18 | 1044157 |
| chr19 | 1789102 |
| chr20 | 1135249 |
| chr21 | 536157 |
| chr22 | 842299 |
| chr22_KI270731v1_random | 70 |
| chr22_KI270732v1_random | 370 |
| chr22_KI270733v1_random | 14537 |
| chr22_KI270734v1_random | 281 |
| chr22_KI270735v1_random | 461 |
| chr22_KI270736v1_random | 1209 |
| chr22_KI270737v1_random | 207 |
| chr22_KI270738v1_random | 507 |
| chr22_KI270739v1_random | 25 |
| chrM | 364063 |
| chrUn_GL000195v1 | 2645 |
| chrUn_GL000213v1 | 51 |
| chrUn_GL000214v1 | 605 |
| chrUn_GL000216v2 | 1825 |
| chrUn_GL000218v1 | 684 |
| chrUn_GL000219v1 | 2426 |
| chrUn_GL000220v1 | 1558 |
| chrUn_GL000224v1 | 1242 |
| chrUn_GL000226v1 | 14 |
| chrUn_KI270302v1 | 3 |
| chrUn_KI270304v1 | 1 |
| chrUn_KI270305v1 | 1 |
| chrUn_KI270310v1 | 4 |
| chrUn_KI270311v1 | 7 |
| chrUn_KI270320v1 | 10 |
| chrUn_KI270322v1 | 2 |
| chrUn_KI270330v1 | 34 |
| chrUn_KI270333v1 | 13 |
| chrUn_KI270336v1 | 7 |
| chrUn_KI270337v1 | 18 |
| chrUn_KI270362v1 | 5 |
| chrUn_KI270363v1 | 4 |
| chrUn_KI270366v1 | 4 |
| chrUn_KI270382v1 | 3 |
| chrUn_KI270384v1 | 1 |
| chrUn_KI270386v1 | 1 |
| chrUn_KI270390v1 | 4 |
| chrUn_KI270391v1 | 1 |
| chrUn_KI270392v1 | 3 |
| chrUn_KI270411v1 | 1 |
| chrUn_KI270412v1 | 3 |
| chrUn_KI270414v1 | 1 |
| chrUn_KI270417v1 | 5 |
| chrUn_KI270418v1 | 6 |
| chrUn_KI270419v1 | 3 |
| chrUn_KI270420v1 | 8 |
| chrUn_KI270422v1 | 1 |
| chrUn_KI270423v1 | 3 |
| chrUn_KI270424v1 | 2 |
| chrUn_KI270425v1 | 1 |
| chrUn_KI270429v1 | 7 |
| chrUn_KI270435v1 | 507 |
| chrUn_KI270438v1 | 6148 |
| chrUn_KI270442v1 | 3135 |
| chrUn_KI270448v1 | 49 |
| chrUn_KI270465v1 | 1 |
| chrUn_KI270466v1 | 769 |
| chrUn_KI270467v1 | 2169 |
| chrUn_KI270468v1 | 36 |
| chrUn_KI270507v1 | 59 |
| chrUn_KI270508v1 | 31 |
| chrUn_KI270509v1 | 23 |
| chrUn_KI270510v1 | 21 |
| chrUn_KI270511v1 | 41 |
| chrUn_KI270512v1 | 101 |
| chrUn_KI270515v1 | 74 |
| chrUn_KI270516v1 | 14 |
| chrUn_KI270517v1 | 41 |
| chrUn_KI270518v1 | 26 |
| chrUn_KI270519v1 | 651 |
| chrUn_KI270521v1 | 30 |
| chrUn_KI270522v1 | 7 |
| chrUn_KI270529v1 | 2 |
| chrUn_KI270530v1 | 3 |
| chrUn_KI270538v1 | 450 |
| chrUn_KI270539v1 | 6 |
| chrUn_KI270544v1 | 3 |
| chrUn_KI270579v1 | 1 |
| chrUn_KI270580v1 | 35 |
| chrUn_KI270582v1 | 3 |
| chrUn_KI270583v1 | 9 |
| chrUn_KI270584v1 | 70 |
| chrUn_KI270587v1 | 39 |
| chrUn_KI270588v1 | 60 |
| chrUn_KI270589v1 | 94 |
| chrUn_KI270590v1 | 48 |
| chrUn_KI270591v1 | 93 |
| chrUn_KI270593v1 | 24 |
| chrUn_KI270741v1 | 35 |
| chrUn_KI270742v1 | 531 |
| chrUn_KI270743v1 | 612 |
| chrUn_KI270744v1 | 834 |
| chrUn_KI270745v1 | 22 |
| chrUn_KI270746v1 | 571 |
| chrUn_KI270747v1 | 61 |
| chrUn_KI270748v1 | 39 |
| chrUn_KI270749v1 | 428 |
| chrUn_KI270750v1 | 713 |
| chrUn_KI270751v1 | 743 |
| chrUn_KI270753v1 | 68 |
| chrUn_KI270754v1 | 97 |
| chrUn_KI270755v1 | 19 |
| chrUn_KI270756v1 | 237 |
| chrUn_KI270757v1 | 284 |
| chrX | 1552256 |
| chrY | 5673 |
| chrY_KI270740v1_random | 1 |
Fragment lengths
| fragments | min | max | mean | median | |
|---|---|---|---|---|---|
| fragments | 46728444 | 7 | 1992 | 286.55 | 214 |
×
Files
| Filename | Size | md5 |
|---|---|---|
| T136_b16_Thyroid_PCW21.fragments.tsv.gz | 449.67 MB | 76cad8f674bf3c46abf655415d428d38 |
| T136_b16_Thyroid_PCW21.fragments.tsv.gz.tbi | 624.78 KB | 60900c670718756b4765a78d232f2211 |
| fragment_count_dist_plot.py | 853.0 B | 9d735ee8c687286d50484e7f1e398e60 |
| genomic_resource.yaml | 1.45 KB | 3695fdd0381dbb12b632e63a15a6c423 |
| statistics/ |