Resource
| Id | summary/liu2026Multiomics/atac_fragments/T136_b22_Thyroid_PCW21 |
|---|---|
| Type | fragment_score |
| Version | 0 |
| Summary | Sample ATAC fragments for T136_b22_Thyroid_PCW21 from liu2026Multiomics. |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Genomic coordinates in fragment files are 0-based. |
| Labels |
|
Scores (2)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| cell | str |
cell |
 |
CL165_F01+A11+F07, CL166_F11+F08+C11, CL165_E02+G09+G03, CL166_F11+G11+F03, CL166_G08+D11+C07 (top 5 of 884736 values) | ||
| count | int |
count |
 |
[1, 41] |
|
n counts fragments; sd is the population standard deviation.
Fragments
| Chromosome | Fragments |
|---|---|
| all chromosomes | 407854273 |
| chr1 | 34946816 |
| chr1_KI270706v1_random | 3979 |
| chr1_KI270707v1_random | 505 |
| chr1_KI270708v1_random | 2453 |
| chr1_KI270709v1_random | 3145 |
| chr1_KI270710v1_random | 795 |
| chr1_KI270711v1_random | 1291 |
| chr1_KI270712v1_random | 2084 |
| chr1_KI270713v1_random | 7196 |
| chr1_KI270714v1_random | 621 |
| chr2 | 30731352 |
| chr2_KI270715v1_random | 73 |
| chr2_KI270716v1_random | 440 |
| chr3 | 25304533 |
| chr3_GL000221v1_random | 682 |
| chr4 | 20501961 |
| chr4_GL000008v2_random | 5210 |
| chr5 | 20979484 |
| chr5_GL000208v1_random | 1945 |
| chr6 | 22089117 |
| chr7 | 20227901 |
| chr8 | 18075732 |
| chr9 | 17149533 |
| chr9_KI270717v1_random | 256 |
| chr9_KI270718v1_random | 418 |
| chr9_KI270719v1_random | 3710 |
| chr9_KI270720v1_random | 1324 |
| chr10 | 18229692 |
| chr11 | 20722842 |
| chr11_KI270721v1_random | 1025 |
| chr12 | 19063066 |
| chr13 | 10422140 |
| chr14 | 13068585 |
| chr14_GL000009v2_random | 5651 |
| chr14_GL000194v1_random | 9422 |
| chr14_GL000225v1_random | 9841 |
| chr14_KI270722v1_random | 7627 |
| chr14_KI270723v1_random | 1442 |
| chr14_KI270724v1_random | 1931 |
| chr14_KI270725v1_random | 2423 |
| chr14_KI270726v1_random | 817 |
| chr15 | 11660943 |
| chr15_KI270727v1_random | 1376 |
| chr16 | 14246723 |
| chr16_KI270728v1_random | 713 |
| chr17 | 17793393 |
| chr17_GL000205v2_random | 30106 |
| chr17_KI270729v1_random | 7934 |
| chr17_KI270730v1_random | 1766 |
| chr18 | 8623320 |
| chr19 | 17123698 |
| chr20 | 10194023 |
| chr21 | 4495306 |
| chr22 | 8193716 |
| chr22_KI270731v1_random | 699 |
| chr22_KI270732v1_random | 1913 |
| chr22_KI270733v1_random | 108721 |
| chr22_KI270734v1_random | 2046 |
| chr22_KI270735v1_random | 2515 |
| chr22_KI270736v1_random | 5863 |
| chr22_KI270737v1_random | 968 |
| chr22_KI270738v1_random | 2722 |
| chr22_KI270739v1_random | 121 |
| chrM | 11985953 |
| chrUn_GL000195v1 | 20214 |
| chrUn_GL000213v1 | 161 |
| chrUn_GL000214v1 | 3233 |
| chrUn_GL000216v2 | 8790 |
| chrUn_GL000218v1 | 3766 |
| chrUn_GL000219v1 | 19598 |
| chrUn_GL000220v1 | 11540 |
| chrUn_GL000224v1 | 6673 |
| chrUn_GL000226v1 | 26 |
| chrUn_KI270302v1 | 23 |
| chrUn_KI270303v1 | 5 |
| chrUn_KI270304v1 | 6 |
| chrUn_KI270305v1 | 13 |
| chrUn_KI270310v1 | 33 |
| chrUn_KI270311v1 | 33 |
| chrUn_KI270315v1 | 11 |
| chrUn_KI270316v1 | 1 |
| chrUn_KI270317v1 | 14 |
| chrUn_KI270320v1 | 47 |
| chrUn_KI270322v1 | 14 |
| chrUn_KI270329v1 | 2 |
| chrUn_KI270330v1 | 170 |
| chrUn_KI270333v1 | 87 |
| chrUn_KI270335v1 | 1 |
| chrUn_KI270336v1 | 58 |
| chrUn_KI270337v1 | 125 |
| chrUn_KI270362v1 | 19 |
| chrUn_KI270363v1 | 28 |
| chrUn_KI270366v1 | 9 |
| chrUn_KI270378v1 | 3 |
| chrUn_KI270381v1 | 1 |
| chrUn_KI270382v1 | 18 |
| chrUn_KI270384v1 | 7 |
| chrUn_KI270385v1 | 9 |
| chrUn_KI270386v1 | 3 |
| chrUn_KI270387v1 | 1 |
| chrUn_KI270389v1 | 1 |
| chrUn_KI270390v1 | 2 |
| chrUn_KI270391v1 | 3 |
| chrUn_KI270392v1 | 10 |
| chrUn_KI270394v1 | 2 |
| chrUn_KI270395v1 | 1 |
| chrUn_KI270411v1 | 7 |
| chrUn_KI270412v1 | 14 |
| chrUn_KI270417v1 | 57 |
| chrUn_KI270418v1 | 28 |
| chrUn_KI270419v1 | 21 |
| chrUn_KI270420v1 | 26 |
| chrUn_KI270422v1 | 29 |
| chrUn_KI270423v1 | 9 |
| chrUn_KI270424v1 | 9 |
| chrUn_KI270425v1 | 11 |
| chrUn_KI270429v1 | 28 |
| chrUn_KI270435v1 | 2607 |
| chrUn_KI270438v1 | 26079 |
| chrUn_KI270442v1 | 17543 |
| chrUn_KI270448v1 | 297 |
| chrUn_KI270465v1 | 36 |
| chrUn_KI270466v1 | 3987 |
| chrUn_KI270467v1 | 12217 |
| chrUn_KI270468v1 | 202 |
| chrUn_KI270507v1 | 314 |
| chrUn_KI270508v1 | 165 |
| chrUn_KI270509v1 | 171 |
| chrUn_KI270510v1 | 111 |
| chrUn_KI270511v1 | 231 |
| chrUn_KI270512v1 | 440 |
| chrUn_KI270515v1 | 397 |
| chrUn_KI270516v1 | 83 |
| chrUn_KI270517v1 | 216 |
| chrUn_KI270518v1 | 123 |
| chrUn_KI270519v1 | 3581 |
| chrUn_KI270521v1 | 137 |
| chrUn_KI270522v1 | 81 |
| chrUn_KI270528v1 | 2 |
| chrUn_KI270529v1 | 8 |
| chrUn_KI270530v1 | 11 |
| chrUn_KI270538v1 | 2825 |
| chrUn_KI270539v1 | 55 |
| chrUn_KI270544v1 | 10 |
| chrUn_KI270579v1 | 4 |
| chrUn_KI270580v1 | 111 |
| chrUn_KI270581v1 | 10 |
| chrUn_KI270582v1 | 20 |
| chrUn_KI270583v1 | 107 |
| chrUn_KI270584v1 | 315 |
| chrUn_KI270587v1 | 186 |
| chrUn_KI270588v1 | 305 |
| chrUn_KI270589v1 | 364 |
| chrUn_KI270590v1 | 282 |
| chrUn_KI270591v1 | 501 |
| chrUn_KI270593v1 | 119 |
| chrUn_KI270741v1 | 110 |
| chrUn_KI270742v1 | 2567 |
| chrUn_KI270743v1 | 3001 |
| chrUn_KI270744v1 | 4103 |
| chrUn_KI270745v1 | 104 |
| chrUn_KI270746v1 | 3120 |
| chrUn_KI270747v1 | 401 |
| chrUn_KI270748v1 | 167 |
| chrUn_KI270749v1 | 2509 |
| chrUn_KI270750v1 | 4031 |
| chrUn_KI270751v1 | 4223 |
| chrUn_KI270753v1 | 341 |
| chrUn_KI270754v1 | 336 |
| chrUn_KI270755v1 | 95 |
| chrUn_KI270756v1 | 1172 |
| chrUn_KI270757v1 | 1548 |
| chrX | 11554421 |
| chrY | 49164 |
| chrY_KI270740v1_random | 9 |
Fragment lengths
| fragments | min | max | mean | median | |
|---|---|---|---|---|---|
| fragments | 407854273 | 7 | 1992 | 225.01 | 178 |
×
Files
| Filename | Size | md5 |
|---|---|---|
| T136_b22_Thyroid_PCW21.fragments.tsv.gz | 3.49 GB | 0c1aec07ec9f91ac2ab9d866d988ab8b |
| T136_b22_Thyroid_PCW21.fragments.tsv.gz.tbi | 1.45 MB | 0da3fc4739041be8533e60673318aa15 |
| fragment_count_dist_plot.py | 853.0 B | 9d735ee8c687286d50484e7f1e398e60 |
| genomic_resource.yaml | 1.45 KB | 7eed49e9d9e61ae9d78437d4180f57ce |
| statistics/ |