Resource
| Id | summary/liu2026Multiomics/atac_fragments/T183_b4_Brain_PCW19 |
|---|---|
| Type | fragment_score |
| Version | 0 |
| Summary | Sample ATAC fragments for T183_b4_Brain_PCW19 from liu2026Multiomics. |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Genomic coordinates in fragment files are 0-based. |
| Labels |
|
Scores (2)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| cell | str |
cell |
 |
CL28_A10+C08+F04, CL30_A04+H10+H06, CL25_A03+B06+C05, CL30_A09+D04+D08, CL30_A08+C02+B11 (top 5 of 884736 values) | ||
| count | int |
count |
 |
[1, 31] |
|
n counts fragments; sd is the population standard deviation.
Fragments
| Chromosome | Fragments |
|---|---|
| all chromosomes | 266281655 |
| chr1 | 22492520 |
| chr1_KI270706v1_random | 4082 |
| chr1_KI270707v1_random | 593 |
| chr1_KI270708v1_random | 2579 |
| chr1_KI270709v1_random | 3076 |
| chr1_KI270710v1_random | 661 |
| chr1_KI270711v1_random | 1375 |
| chr1_KI270712v1_random | 1669 |
| chr1_KI270713v1_random | 3211 |
| chr1_KI270714v1_random | 1085 |
| chr2 | 21088698 |
| chr2_KI270715v1_random | 29 |
| chr2_KI270716v1_random | 259 |
| chr3 | 17488551 |
| chr3_GL000221v1_random | 593 |
| chr4 | 15203164 |
| chr4_GL000008v2_random | 5756 |
| chr5 | 15309560 |
| chr5_GL000208v1_random | 1475 |
| chr6 | 15033279 |
| chr7 | 14105085 |
| chr8 | 12831048 |
| chr9 | 11055799 |
| chr9_KI270717v1_random | 118 |
| chr9_KI270718v1_random | 384 |
| chr9_KI270719v1_random | 3545 |
| chr9_KI270720v1_random | 1539 |
| chr10 | 11960070 |
| chr11 | 13350318 |
| chr11_KI270721v1_random | 323 |
| chr12 | 12595588 |
| chr13 | 7783965 |
| chr14 | 8208255 |
| chr14_GL000009v2_random | 4072 |
| chr14_GL000194v1_random | 7960 |
| chr14_GL000225v1_random | 9815 |
| chr14_KI270722v1_random | 3412 |
| chr14_KI270723v1_random | 1689 |
| chr14_KI270724v1_random | 2087 |
| chr14_KI270725v1_random | 2359 |
| chr14_KI270726v1_random | 30 |
| chr15 | 7403711 |
| chr15_KI270727v1_random | 634 |
| chr16 | 8147814 |
| chr16_KI270728v1_random | 5218 |
| chr17 | 9698344 |
| chr17_GL000205v2_random | 18190 |
| chr17_KI270729v1_random | 4912 |
| chr17_KI270730v1_random | 1447 |
| chr18 | 6378334 |
| chr19 | 8472283 |
| chr20 | 6261401 |
| chr21 | 3004756 |
| chr22 | 4707097 |
| chr22_KI270731v1_random | 273 |
| chr22_KI270732v1_random | 1866 |
| chr22_KI270733v1_random | 30615 |
| chr22_KI270734v1_random | 447 |
| chr22_KI270735v1_random | 2408 |
| chr22_KI270736v1_random | 8570 |
| chr22_KI270737v1_random | 513 |
| chr22_KI270738v1_random | 1427 |
| chr22_KI270739v1_random | 56 |
| chrM | 6876482 |
| chrUn_GL000195v1 | 10593 |
| chrUn_GL000213v1 | 235 |
| chrUn_GL000214v1 | 1836 |
| chrUn_GL000216v2 | 8673 |
| chrUn_GL000218v1 | 2686 |
| chrUn_GL000219v1 | 8990 |
| chrUn_GL000220v1 | 4897 |
| chrUn_GL000224v1 | 4925 |
| chrUn_GL000226v1 | 10 |
| chrUn_KI270302v1 | 7 |
| chrUn_KI270303v1 | 15 |
| chrUn_KI270304v1 | 35 |
| chrUn_KI270305v1 | 9 |
| chrUn_KI270310v1 | 66 |
| chrUn_KI270311v1 | 13 |
| chrUn_KI270315v1 | 2 |
| chrUn_KI270317v1 | 4 |
| chrUn_KI270320v1 | 81 |
| chrUn_KI270322v1 | 41 |
| chrUn_KI270330v1 | 89 |
| chrUn_KI270333v1 | 109 |
| chrUn_KI270336v1 | 33 |
| chrUn_KI270337v1 | 168 |
| chrUn_KI270362v1 | 19 |
| chrUn_KI270363v1 | 19 |
| chrUn_KI270366v1 | 13 |
| chrUn_KI270378v1 | 2 |
| chrUn_KI270382v1 | 10 |
| chrUn_KI270383v1 | 3 |
| chrUn_KI270384v1 | 3 |
| chrUn_KI270385v1 | 1 |
| chrUn_KI270388v1 | 1 |
| chrUn_KI270389v1 | 5 |
| chrUn_KI270390v1 | 4 |
| chrUn_KI270391v1 | 4 |
| chrUn_KI270392v1 | 5 |
| chrUn_KI270393v1 | 5 |
| chrUn_KI270395v1 | 2 |
| chrUn_KI270396v1 | 1 |
| chrUn_KI270411v1 | 12 |
| chrUn_KI270412v1 | 7 |
| chrUn_KI270414v1 | 3 |
| chrUn_KI270417v1 | 34 |
| chrUn_KI270418v1 | 23 |
| chrUn_KI270419v1 | 10 |
| chrUn_KI270420v1 | 34 |
| chrUn_KI270422v1 | 23 |
| chrUn_KI270423v1 | 2 |
| chrUn_KI270424v1 | 1 |
| chrUn_KI270425v1 | 1 |
| chrUn_KI270429v1 | 93 |
| chrUn_KI270435v1 | 1970 |
| chrUn_KI270438v1 | 16806 |
| chrUn_KI270442v1 | 17164 |
| chrUn_KI270448v1 | 216 |
| chrUn_KI270465v1 | 24 |
| chrUn_KI270466v1 | 1886 |
| chrUn_KI270467v1 | 5975 |
| chrUn_KI270468v1 | 152 |
| chrUn_KI270507v1 | 231 |
| chrUn_KI270508v1 | 130 |
| chrUn_KI270509v1 | 94 |
| chrUn_KI270510v1 | 72 |
| chrUn_KI270511v1 | 199 |
| chrUn_KI270512v1 | 402 |
| chrUn_KI270515v1 | 281 |
| chrUn_KI270516v1 | 66 |
| chrUn_KI270517v1 | 139 |
| chrUn_KI270518v1 | 79 |
| chrUn_KI270519v1 | 2671 |
| chrUn_KI270521v1 | 132 |
| chrUn_KI270522v1 | 51 |
| chrUn_KI270528v1 | 2 |
| chrUn_KI270529v1 | 3 |
| chrUn_KI270530v1 | 2 |
| chrUn_KI270538v1 | 2201 |
| chrUn_KI270539v1 | 10 |
| chrUn_KI270544v1 | 4 |
| chrUn_KI270579v1 | 4 |
| chrUn_KI270580v1 | 91 |
| chrUn_KI270581v1 | 2 |
| chrUn_KI270582v1 | 31 |
| chrUn_KI270583v1 | 108 |
| chrUn_KI270584v1 | 232 |
| chrUn_KI270587v1 | 63 |
| chrUn_KI270588v1 | 280 |
| chrUn_KI270589v1 | 360 |
| chrUn_KI270590v1 | 231 |
| chrUn_KI270591v1 | 427 |
| chrUn_KI270593v1 | 105 |
| chrUn_KI270741v1 | 149 |
| chrUn_KI270742v1 | 2479 |
| chrUn_KI270743v1 | 3906 |
| chrUn_KI270744v1 | 5908 |
| chrUn_KI270745v1 | 148 |
| chrUn_KI270746v1 | 2766 |
| chrUn_KI270747v1 | 340 |
| chrUn_KI270748v1 | 145 |
| chrUn_KI270749v1 | 3024 |
| chrUn_KI270750v1 | 3770 |
| chrUn_KI270751v1 | 3546 |
| chrUn_KI270753v1 | 387 |
| chrUn_KI270754v1 | 900 |
| chrUn_KI270755v1 | 149 |
| chrUn_KI270756v1 | 723 |
| chrUn_KI270757v1 | 1228 |
| chrX | 6143487 |
| chrY | 415126 |
| chrY_KI270740v1_random | 247 |
Fragment lengths
| fragments | min | max | mean | median | |
|---|---|---|---|---|---|
| fragments | 266281655 | 7 | 1992 | 280.28 | 218 |
×
Files
| Filename | Size | md5 |
|---|---|---|
| T183_b4_Brain_PCW19.fragments.tsv.gz | 2.39 GB | f11efc5b0a32f9bbb4489732480daca6 |
| T183_b4_Brain_PCW19.fragments.tsv.gz.tbi | 1.23 MB | 1e723b790e715cbbf7db113c4a5cb313 |
| fragment_count_dist_plot.py | 853.0 B | 9d735ee8c687286d50484e7f1e398e60 |
| genomic_resource.yaml | 1.44 KB | 562cd6e5892a57e9b38776b90748ae2a |
| statistics/ |