Resource
| Id | summary/liu2026Multiomics/atac_fragments/T233_b17_Thymus_PCW21 |
|---|---|
| Type | fragment_score |
| Version | 0 |
| Summary | Sample ATAC fragments for T233_b17_Thymus_PCW21 from liu2026Multiomics. |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Genomic coordinates in fragment files are 0-based. |
| Labels |
|
Scores (2)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| cell | str |
cell |
 |
CL124_H09+E06+E05, CL124_H07+F08+F08, CL123_H06+B09+F09, CL123_H12+B01+H05, CL121_H03+B10+A10 (top 5 of 1740717 values) | ||
| count | int |
count |
 |
[1, 28] |
|
n counts fragments; sd is the population standard deviation.
Fragments
| Chromosome | Fragments |
|---|---|
| all chromosomes | 313449348 |
| chr1 | 28031719 |
| chr1_KI270706v1_random | 1996 |
| chr1_KI270707v1_random | 281 |
| chr1_KI270708v1_random | 920 |
| chr1_KI270709v1_random | 2117 |
| chr1_KI270710v1_random | 309 |
| chr1_KI270711v1_random | 883 |
| chr1_KI270712v1_random | 786 |
| chr1_KI270713v1_random | 12441 |
| chr1_KI270714v1_random | 852 |
| chr2 | 24985955 |
| chr2_KI270715v1_random | 104 |
| chr2_KI270716v1_random | 180 |
| chr3 | 20281856 |
| chr3_GL000221v1_random | 381 |
| chr4 | 15715029 |
| chr4_GL000008v2_random | 2656 |
| chr5 | 16503906 |
| chr5_GL000208v1_random | 1185 |
| chr6 | 18401070 |
| chr7 | 16291334 |
| chr8 | 13295070 |
| chr9 | 12896135 |
| chr9_KI270717v1_random | 202 |
| chr9_KI270718v1_random | 272 |
| chr9_KI270719v1_random | 2485 |
| chr9_KI270720v1_random | 940 |
| chr10 | 13978471 |
| chr11 | 15598370 |
| chr11_KI270721v1_random | 509 |
| chr12 | 15664124 |
| chr13 | 8387660 |
| chr14 | 10063641 |
| chr14_GL000009v2_random | 2710 |
| chr14_GL000194v1_random | 3151 |
| chr14_GL000225v1_random | 7565 |
| chr14_KI270722v1_random | 2472 |
| chr14_KI270723v1_random | 500 |
| chr14_KI270724v1_random | 520 |
| chr14_KI270725v1_random | 1971 |
| chr14_KI270726v1_random | 4707 |
| chr15 | 8895854 |
| chr15_KI270727v1_random | 1254 |
| chr16 | 11091881 |
| chr16_KI270728v1_random | 3800 |
| chr17 | 14078613 |
| chr17_GL000205v2_random | 24516 |
| chr17_KI270729v1_random | 2875 |
| chr17_KI270730v1_random | 668 |
| chr18 | 6379015 |
| chr19 | 13938085 |
| chr20 | 7290382 |
| chr21 | 3862820 |
| chr22 | 6097503 |
| chr22_KI270731v1_random | 359 |
| chr22_KI270732v1_random | 1201 |
| chr22_KI270733v1_random | 43619 |
| chr22_KI270734v1_random | 551 |
| chr22_KI270735v1_random | 1653 |
| chr22_KI270736v1_random | 1331 |
| chr22_KI270737v1_random | 349 |
| chr22_KI270738v1_random | 905 |
| chr22_KI270739v1_random | 24 |
| chrM | 2520810 |
| chrUn_GL000195v1 | 27830 |
| chrUn_GL000213v1 | 159 |
| chrUn_GL000214v1 | 719 |
| chrUn_GL000216v2 | 2878 |
| chrUn_GL000218v1 | 1800 |
| chrUn_GL000219v1 | 9830 |
| chrUn_GL000220v1 | 7597 |
| chrUn_GL000224v1 | 3163 |
| chrUn_GL000226v1 | 4 |
| chrUn_KI270302v1 | 11 |
| chrUn_KI270303v1 | 17 |
| chrUn_KI270304v1 | 10 |
| chrUn_KI270305v1 | 2 |
| chrUn_KI270310v1 | 33 |
| chrUn_KI270311v1 | 9 |
| chrUn_KI270315v1 | 5 |
| chrUn_KI270316v1 | 4 |
| chrUn_KI270317v1 | 4 |
| chrUn_KI270320v1 | 39 |
| chrUn_KI270322v1 | 20 |
| chrUn_KI270330v1 | 155 |
| chrUn_KI270333v1 | 235 |
| chrUn_KI270336v1 | 90 |
| chrUn_KI270337v1 | 210 |
| chrUn_KI270362v1 | 19 |
| chrUn_KI270363v1 | 22 |
| chrUn_KI270366v1 | 16 |
| chrUn_KI270378v1 | 6 |
| chrUn_KI270382v1 | 6 |
| chrUn_KI270383v1 | 1 |
| chrUn_KI270384v1 | 4 |
| chrUn_KI270385v1 | 3 |
| chrUn_KI270388v1 | 2 |
| chrUn_KI270390v1 | 1 |
| chrUn_KI270392v1 | 4 |
| chrUn_KI270393v1 | 18 |
| chrUn_KI270394v1 | 1 |
| chrUn_KI270395v1 | 9 |
| chrUn_KI270411v1 | 2 |
| chrUn_KI270412v1 | 4 |
| chrUn_KI270414v1 | 6 |
| chrUn_KI270417v1 | 35 |
| chrUn_KI270418v1 | 17 |
| chrUn_KI270419v1 | 6 |
| chrUn_KI270420v1 | 23 |
| chrUn_KI270422v1 | 2 |
| chrUn_KI270423v1 | 1 |
| chrUn_KI270424v1 | 2 |
| chrUn_KI270425v1 | 2 |
| chrUn_KI270429v1 | 44 |
| chrUn_KI270435v1 | 1187 |
| chrUn_KI270438v1 | 8016 |
| chrUn_KI270442v1 | 10098 |
| chrUn_KI270448v1 | 204 |
| chrUn_KI270465v1 | 22 |
| chrUn_KI270466v1 | 1616 |
| chrUn_KI270467v1 | 5701 |
| chrUn_KI270468v1 | 92 |
| chrUn_KI270507v1 | 206 |
| chrUn_KI270508v1 | 99 |
| chrUn_KI270509v1 | 81 |
| chrUn_KI270510v1 | 53 |
| chrUn_KI270511v1 | 141 |
| chrUn_KI270512v1 | 252 |
| chrUn_KI270515v1 | 249 |
| chrUn_KI270516v1 | 39 |
| chrUn_KI270517v1 | 118 |
| chrUn_KI270518v1 | 79 |
| chrUn_KI270519v1 | 2499 |
| chrUn_KI270521v1 | 96 |
| chrUn_KI270522v1 | 41 |
| chrUn_KI270528v1 | 2 |
| chrUn_KI270529v1 | 8 |
| chrUn_KI270530v1 | 8 |
| chrUn_KI270538v1 | 1665 |
| chrUn_KI270539v1 | 17 |
| chrUn_KI270544v1 | 7 |
| chrUn_KI270579v1 | 4 |
| chrUn_KI270580v1 | 77 |
| chrUn_KI270581v1 | 8 |
| chrUn_KI270582v1 | 20 |
| chrUn_KI270583v1 | 81 |
| chrUn_KI270584v1 | 184 |
| chrUn_KI270587v1 | 225 |
| chrUn_KI270588v1 | 168 |
| chrUn_KI270589v1 | 184 |
| chrUn_KI270590v1 | 140 |
| chrUn_KI270591v1 | 244 |
| chrUn_KI270593v1 | 62 |
| chrUn_KI270741v1 | 40 |
| chrUn_KI270742v1 | 1667 |
| chrUn_KI270743v1 | 921 |
| chrUn_KI270744v1 | 3394 |
| chrUn_KI270745v1 | 135 |
| chrUn_KI270746v1 | 2426 |
| chrUn_KI270747v1 | 189 |
| chrUn_KI270748v1 | 106 |
| chrUn_KI270749v1 | 2200 |
| chrUn_KI270750v1 | 3138 |
| chrUn_KI270751v1 | 2017 |
| chrUn_KI270753v1 | 197 |
| chrUn_KI270754v1 | 437 |
| chrUn_KI270755v1 | 101 |
| chrUn_KI270756v1 | 376 |
| chrUn_KI270757v1 | 741 |
| chrX | 8908355 |
| chrY | 48298 |
| chrY_KI270740v1_random | 34 |
Fragment lengths
| fragments | min | max | mean | median | |
|---|---|---|---|---|---|
| fragments | 313449348 | 7 | 1992 | 249.12 | 180 |
×
Files
| Filename | Size | md5 |
|---|---|---|
| T233_b17_Thymus_PCW21.fragments.tsv.gz | 2.89 GB | 17efc117b4897ea40a76798335254168 |
| T233_b17_Thymus_PCW21.fragments.tsv.gz.tbi | 1.31 MB | 5ddc7b43d809ce8835f259f3d30d1bdd |
| fragment_count_dist_plot.py | 853.0 B | 9d735ee8c687286d50484e7f1e398e60 |
| genomic_resource.yaml | 1.45 KB | c3247bce150533d22540710dbf58a8c2 |
| statistics/ |