Resource
| Id | summary/liu2026Multiomics/atac_fragments/T322_b10_Stomach_PCW21 |
|---|---|
| Type | fragment_score |
| Version | 0 |
| Summary | Sample ATAC fragments for T322_b10_Stomach_PCW21 from liu2026Multiomics. |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Genomic coordinates in fragment files are 0-based. |
| Labels |
|
Scores (2)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| cell | str |
cell |
 |
CL69_F01+H02+E11, CL72_F07+H05+A02, CL65_F07+E05+B08, CL68_F09+H09+C07, CL67_F08+G12+D02 (top 5 of 884719 values) | ||
| count | int |
count |
 |
[1, 28] |
|
n counts fragments; sd is the population standard deviation.
Fragments
| Chromosome | Fragments |
|---|---|
| all chromosomes | 295602111 |
| chr1 | 25345755 |
| chr1_KI270706v1_random | 4388 |
| chr1_KI270707v1_random | 624 |
| chr1_KI270708v1_random | 3209 |
| chr1_KI270709v1_random | 4977 |
| chr1_KI270710v1_random | 1064 |
| chr1_KI270711v1_random | 1188 |
| chr1_KI270712v1_random | 1957 |
| chr1_KI270713v1_random | 6420 |
| chr1_KI270714v1_random | 1636 |
| chr2 | 23482100 |
| chr2_KI270715v1_random | 310 |
| chr2_KI270716v1_random | 610 |
| chr3 | 19570769 |
| chr3_GL000221v1_random | 677 |
| chr4 | 16846545 |
| chr4_GL000008v2_random | 6276 |
| chr5 | 16734611 |
| chr5_GL000208v1_random | 3099 |
| chr6 | 17143701 |
| chr7 | 15552033 |
| chr8 | 13733654 |
| chr9 | 12432900 |
| chr9_KI270717v1_random | 197 |
| chr9_KI270718v1_random | 394 |
| chr9_KI270719v1_random | 4474 |
| chr9_KI270720v1_random | 1799 |
| chr10 | 13538192 |
| chr11 | 15127461 |
| chr11_KI270721v1_random | 689 |
| chr12 | 14258553 |
| chr13 | 8557624 |
| chr14 | 9470347 |
| chr14_GL000009v2_random | 5602 |
| chr14_GL000194v1_random | 3862 |
| chr14_GL000225v1_random | 15670 |
| chr14_KI270722v1_random | 7458 |
| chr14_KI270723v1_random | 1514 |
| chr14_KI270724v1_random | 1836 |
| chr14_KI270725v1_random | 3768 |
| chr14_KI270726v1_random | 1849 |
| chr15 | 8310592 |
| chr15_KI270727v1_random | 838 |
| chr16 | 9560385 |
| chr16_KI270728v1_random | 12682 |
| chr17 | 11583764 |
| chr17_GL000205v2_random | 24149 |
| chr17_KI270729v1_random | 10574 |
| chr17_KI270730v1_random | 2264 |
| chr18 | 6935299 |
| chr19 | 10193641 |
| chr20 | 6999183 |
| chr21 | 3640602 |
| chr22 | 5098415 |
| chr22_KI270731v1_random | 705 |
| chr22_KI270732v1_random | 2428 |
| chr22_KI270733v1_random | 71077 |
| chr22_KI270734v1_random | 1102 |
| chr22_KI270735v1_random | 3605 |
| chr22_KI270736v1_random | 5066 |
| chr22_KI270737v1_random | 1189 |
| chr22_KI270738v1_random | 3362 |
| chr22_KI270739v1_random | 78 |
| chrM | 3360241 |
| chrUn_GL000195v1 | 15364 |
| chrUn_GL000213v1 | 258 |
| chrUn_GL000214v1 | 1651 |
| chrUn_GL000216v2 | 11153 |
| chrUn_GL000218v1 | 4925 |
| chrUn_GL000219v1 | 18125 |
| chrUn_GL000220v1 | 5955 |
| chrUn_GL000224v1 | 9611 |
| chrUn_GL000226v1 | 5 |
| chrUn_KI270302v1 | 26 |
| chrUn_KI270303v1 | 5 |
| chrUn_KI270304v1 | 7 |
| chrUn_KI270305v1 | 10 |
| chrUn_KI270310v1 | 28 |
| chrUn_KI270311v1 | 33 |
| chrUn_KI270312v1 | 3 |
| chrUn_KI270315v1 | 12 |
| chrUn_KI270316v1 | 3 |
| chrUn_KI270317v1 | 11 |
| chrUn_KI270320v1 | 95 |
| chrUn_KI270322v1 | 81 |
| chrUn_KI270330v1 | 314 |
| chrUn_KI270333v1 | 232 |
| chrUn_KI270336v1 | 108 |
| chrUn_KI270337v1 | 206 |
| chrUn_KI270362v1 | 48 |
| chrUn_KI270363v1 | 35 |
| chrUn_KI270364v1 | 1 |
| chrUn_KI270366v1 | 16 |
| chrUn_KI270371v1 | 1 |
| chrUn_KI270382v1 | 3 |
| chrUn_KI270385v1 | 7 |
| chrUn_KI270386v1 | 1 |
| chrUn_KI270388v1 | 3 |
| chrUn_KI270390v1 | 1 |
| chrUn_KI270393v1 | 4 |
| chrUn_KI270395v1 | 1 |
| chrUn_KI270411v1 | 19 |
| chrUn_KI270412v1 | 10 |
| chrUn_KI270414v1 | 6 |
| chrUn_KI270417v1 | 88 |
| chrUn_KI270418v1 | 25 |
| chrUn_KI270419v1 | 17 |
| chrUn_KI270420v1 | 53 |
| chrUn_KI270422v1 | 23 |
| chrUn_KI270423v1 | 8 |
| chrUn_KI270424v1 | 6 |
| chrUn_KI270425v1 | 3 |
| chrUn_KI270429v1 | 126 |
| chrUn_KI270435v1 | 3841 |
| chrUn_KI270438v1 | 34369 |
| chrUn_KI270442v1 | 23627 |
| chrUn_KI270448v1 | 447 |
| chrUn_KI270465v1 | 49 |
| chrUn_KI270466v1 | 2319 |
| chrUn_KI270467v1 | 6558 |
| chrUn_KI270468v1 | 315 |
| chrUn_KI270507v1 | 537 |
| chrUn_KI270508v1 | 211 |
| chrUn_KI270509v1 | 219 |
| chrUn_KI270510v1 | 127 |
| chrUn_KI270511v1 | 452 |
| chrUn_KI270512v1 | 677 |
| chrUn_KI270515v1 | 626 |
| chrUn_KI270516v1 | 131 |
| chrUn_KI270517v1 | 319 |
| chrUn_KI270518v1 | 164 |
| chrUn_KI270519v1 | 5401 |
| chrUn_KI270521v1 | 236 |
| chrUn_KI270522v1 | 121 |
| chrUn_KI270528v1 | 1 |
| chrUn_KI270529v1 | 14 |
| chrUn_KI270530v1 | 15 |
| chrUn_KI270538v1 | 4644 |
| chrUn_KI270539v1 | 35 |
| chrUn_KI270544v1 | 14 |
| chrUn_KI270579v1 | 33 |
| chrUn_KI270580v1 | 144 |
| chrUn_KI270581v1 | 9 |
| chrUn_KI270582v1 | 39 |
| chrUn_KI270583v1 | 135 |
| chrUn_KI270584v1 | 453 |
| chrUn_KI270587v1 | 54 |
| chrUn_KI270588v1 | 550 |
| chrUn_KI270589v1 | 566 |
| chrUn_KI270590v1 | 409 |
| chrUn_KI270591v1 | 667 |
| chrUn_KI270593v1 | 196 |
| chrUn_KI270741v1 | 223 |
| chrUn_KI270742v1 | 3643 |
| chrUn_KI270743v1 | 3569 |
| chrUn_KI270744v1 | 7157 |
| chrUn_KI270745v1 | 349 |
| chrUn_KI270746v1 | 3947 |
| chrUn_KI270747v1 | 353 |
| chrUn_KI270748v1 | 323 |
| chrUn_KI270749v1 | 3601 |
| chrUn_KI270750v1 | 5664 |
| chrUn_KI270751v1 | 5452 |
| chrUn_KI270753v1 | 362 |
| chrUn_KI270754v1 | 1171 |
| chrUn_KI270755v1 | 369 |
| chrUn_KI270756v1 | 1399 |
| chrUn_KI270757v1 | 2334 |
| chrX | 7164746 |
| chrY | 538553 |
| chrY_KI270740v1_random | 413 |
Fragment lengths
| fragments | min | max | mean | median | |
|---|---|---|---|---|---|
| fragments | 295602111 | 7 | 1992 | 282.87 | 215 |
×
Files
| Filename | Size | md5 |
|---|---|---|
| T322_b10_Stomach_PCW21.fragments.tsv.gz | 2.86 GB | 6596c92cc10e7f6a5c11345003567be4 |
| T322_b10_Stomach_PCW21.fragments.tsv.gz.tbi | 1.29 MB | e78c1b1d4125f4edcda41e1f5117a6f0 |
| fragment_count_dist_plot.py | 853.0 B | 9d735ee8c687286d50484e7f1e398e60 |
| genomic_resource.yaml | 1.45 KB | d41427e6832132610e59e8136943a181 |
| statistics/ |