Resource
| Id | summary/liu2026Multiomics/atac_fragments/T350_b15_Liver_PCW21 |
|---|---|
| Type | fragment_score |
| Version | 0 |
| Summary | Sample ATAC fragments for T350_b15_Liver_PCW21 from liu2026Multiomics. |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Genomic coordinates in fragment files are 0-based. |
| Labels |
|
Scores (2)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| cell | str |
cell |
 |
CL112_D07+B08+C12, CL110_D03+C04+D05, CL108_D04+B06+A10, CL110_D04+E03+E01, CL106_D12+C12+A10 (top 5 of 1105834 values) | ||
| count | int |
count |
 |
[1, 45] |
|
n counts fragments; sd is the population standard deviation.
Fragments
| Chromosome | Fragments |
|---|---|
| all chromosomes | 398888812 |
| chr1 | 37486477 |
| chr1_KI270706v1_random | 4851 |
| chr1_KI270707v1_random | 537 |
| chr1_KI270708v1_random | 2633 |
| chr1_KI270709v1_random | 3598 |
| chr1_KI270710v1_random | 753 |
| chr1_KI270711v1_random | 1824 |
| chr1_KI270712v1_random | 1999 |
| chr1_KI270713v1_random | 15716 |
| chr1_KI270714v1_random | 2670 |
| chr2 | 30304310 |
| chr2_KI270715v1_random | 198 |
| chr2_KI270716v1_random | 305 |
| chr3 | 25478475 |
| chr3_GL000221v1_random | 709 |
| chr4 | 18772006 |
| chr4_GL000008v2_random | 5635 |
| chr5 | 20765216 |
| chr5_GL000208v1_random | 1826 |
| chr6 | 23043914 |
| chr7 | 20246496 |
| chr8 | 17078907 |
| chr9 | 16657228 |
| chr9_KI270717v1_random | 277 |
| chr9_KI270718v1_random | 324 |
| chr9_KI270719v1_random | 3384 |
| chr9_KI270720v1_random | 1180 |
| chr10 | 17529093 |
| chr11 | 20722945 |
| chr11_KI270721v1_random | 1421 |
| chr12 | 19249608 |
| chr13 | 9674224 |
| chr14 | 12976588 |
| chr14_GL000009v2_random | 4420 |
| chr14_GL000194v1_random | 4288 |
| chr14_GL000225v1_random | 18757 |
| chr14_KI270722v1_random | 5812 |
| chr14_KI270723v1_random | 1559 |
| chr14_KI270724v1_random | 1800 |
| chr14_KI270725v1_random | 2764 |
| chr14_KI270726v1_random | 1365 |
| chr15 | 11613572 |
| chr15_KI270727v1_random | 1153 |
| chr16 | 14284231 |
| chr16_KI270728v1_random | 10638 |
| chr17 | 18012474 |
| chr17_GL000205v2_random | 48369 |
| chr17_KI270729v1_random | 6311 |
| chr17_KI270730v1_random | 1624 |
| chr18 | 7984503 |
| chr19 | 18785526 |
| chr20 | 9947335 |
| chr21 | 4359687 |
| chr22 | 8311435 |
| chr22_KI270731v1_random | 1131 |
| chr22_KI270732v1_random | 1869 |
| chr22_KI270733v1_random | 166599 |
| chr22_KI270734v1_random | 2225 |
| chr22_KI270735v1_random | 2635 |
| chr22_KI270736v1_random | 4766 |
| chr22_KI270737v1_random | 699 |
| chr22_KI270738v1_random | 1909 |
| chr22_KI270739v1_random | 62 |
| chrM | 5852201 |
| chrUn_GL000195v1 | 43869 |
| chrUn_GL000213v1 | 216 |
| chrUn_GL000214v1 | 1982 |
| chrUn_GL000216v2 | 9859 |
| chrUn_GL000218v1 | 4891 |
| chrUn_GL000219v1 | 40223 |
| chrUn_GL000220v1 | 13207 |
| chrUn_GL000224v1 | 9751 |
| chrUn_GL000226v1 | 3 |
| chrUn_KI270302v1 | 5 |
| chrUn_KI270303v1 | 17 |
| chrUn_KI270304v1 | 9 |
| chrUn_KI270305v1 | 12 |
| chrUn_KI270310v1 | 27 |
| chrUn_KI270311v1 | 12 |
| chrUn_KI270312v1 | 2 |
| chrUn_KI270315v1 | 11 |
| chrUn_KI270316v1 | 4 |
| chrUn_KI270317v1 | 7 |
| chrUn_KI270320v1 | 79 |
| chrUn_KI270322v1 | 52 |
| chrUn_KI270329v1 | 2 |
| chrUn_KI270330v1 | 414 |
| chrUn_KI270333v1 | 241 |
| chrUn_KI270336v1 | 126 |
| chrUn_KI270337v1 | 263 |
| chrUn_KI270362v1 | 38 |
| chrUn_KI270363v1 | 26 |
| chrUn_KI270364v1 | 1 |
| chrUn_KI270366v1 | 8 |
| chrUn_KI270382v1 | 3 |
| chrUn_KI270383v1 | 1 |
| chrUn_KI270385v1 | 6 |
| chrUn_KI270390v1 | 1 |
| chrUn_KI270391v1 | 1 |
| chrUn_KI270392v1 | 1 |
| chrUn_KI270394v1 | 1 |
| chrUn_KI270395v1 | 1 |
| chrUn_KI270396v1 | 3 |
| chrUn_KI270411v1 | 9 |
| chrUn_KI270412v1 | 7 |
| chrUn_KI270414v1 | 7 |
| chrUn_KI270417v1 | 39 |
| chrUn_KI270418v1 | 16 |
| chrUn_KI270419v1 | 7 |
| chrUn_KI270420v1 | 29 |
| chrUn_KI270422v1 | 9 |
| chrUn_KI270423v1 | 5 |
| chrUn_KI270424v1 | 9 |
| chrUn_KI270429v1 | 106 |
| chrUn_KI270435v1 | 2346 |
| chrUn_KI270438v1 | 22750 |
| chrUn_KI270442v1 | 17560 |
| chrUn_KI270448v1 | 301 |
| chrUn_KI270465v1 | 27 |
| chrUn_KI270466v1 | 1581 |
| chrUn_KI270467v1 | 4842 |
| chrUn_KI270468v1 | 171 |
| chrUn_KI270507v1 | 298 |
| chrUn_KI270508v1 | 171 |
| chrUn_KI270509v1 | 129 |
| chrUn_KI270510v1 | 126 |
| chrUn_KI270511v1 | 220 |
| chrUn_KI270512v1 | 497 |
| chrUn_KI270515v1 | 394 |
| chrUn_KI270516v1 | 58 |
| chrUn_KI270517v1 | 180 |
| chrUn_KI270518v1 | 116 |
| chrUn_KI270519v1 | 3317 |
| chrUn_KI270521v1 | 184 |
| chrUn_KI270522v1 | 92 |
| chrUn_KI270528v1 | 1 |
| chrUn_KI270529v1 | 4 |
| chrUn_KI270530v1 | 9 |
| chrUn_KI270538v1 | 2515 |
| chrUn_KI270539v1 | 41 |
| chrUn_KI270544v1 | 7 |
| chrUn_KI270579v1 | 18 |
| chrUn_KI270580v1 | 126 |
| chrUn_KI270581v1 | 3 |
| chrUn_KI270582v1 | 47 |
| chrUn_KI270583v1 | 100 |
| chrUn_KI270584v1 | 300 |
| chrUn_KI270587v1 | 49 |
| chrUn_KI270588v1 | 303 |
| chrUn_KI270589v1 | 401 |
| chrUn_KI270590v1 | 256 |
| chrUn_KI270591v1 | 461 |
| chrUn_KI270593v1 | 109 |
| chrUn_KI270741v1 | 259 |
| chrUn_KI270742v1 | 3519 |
| chrUn_KI270743v1 | 3523 |
| chrUn_KI270744v1 | 8166 |
| chrUn_KI270745v1 | 545 |
| chrUn_KI270746v1 | 2872 |
| chrUn_KI270747v1 | 295 |
| chrUn_KI270748v1 | 518 |
| chrUn_KI270749v1 | 2896 |
| chrUn_KI270750v1 | 3958 |
| chrUn_KI270751v1 | 4198 |
| chrUn_KI270752v1 | 330 |
| chrUn_KI270753v1 | 358 |
| chrUn_KI270754v1 | 1377 |
| chrUn_KI270755v1 | 261 |
| chrUn_KI270756v1 | 894 |
| chrUn_KI270757v1 | 1469 |
| chrX | 8617677 |
| chrY | 572674 |
| chrY_KI270740v1_random | 249 |
Fragment lengths
| fragments | min | max | mean | median | |
|---|---|---|---|---|---|
| fragments | 398888812 | 7 | 1992 | 190.96 | 123 |
×
Files
| Filename | Size | md5 |
|---|---|---|
| T350_b15_Liver_PCW21.fragments.tsv.gz | 3.42 GB | 948fe3fdc7b0fd0fa2ca9c39f0c334b2 |
| T350_b15_Liver_PCW21.fragments.tsv.gz.tbi | 1.4 MB | ae6a6fe6d44f9392546ecc9cb0e47da5 |
| fragment_count_dist_plot.py | 853.0 B | 9d735ee8c687286d50484e7f1e398e60 |
| genomic_resource.yaml | 1.44 KB | 75ba617b0d677437bbdf6ddbd5f1cf05 |
| statistics/ |