Resource
| Id | summary/liu2026Multiomics/atac_fragments/T53_b10_Stomach_PCW20 |
|---|---|
| Type | fragment_score |
| Version | 0 |
| Summary | Sample ATAC fragments for T53_b10_Stomach_PCW20 from liu2026Multiomics. |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Genomic coordinates in fragment files are 0-based. |
| Labels |
|
Scores (2)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| cell | str |
cell |
 |
CL70_D06+A06+A04, CL70_D08+H07+B10, CL72_D05+E01+F10, CL65_D04+C02+H10, CL66_D03+B03+D07 (top 5 of 884726 values) | ||
| count | int |
count |
 |
[1, 18] |
|
n counts fragments; sd is the population standard deviation.
Fragments
| Chromosome | Fragments |
|---|---|
| all chromosomes | 267716945 |
| chr1 | 23606575 |
| chr1_KI270706v1_random | 2792 |
| chr1_KI270707v1_random | 505 |
| chr1_KI270708v1_random | 405 |
| chr1_KI270709v1_random | 3407 |
| chr1_KI270710v1_random | 205 |
| chr1_KI270711v1_random | 1266 |
| chr1_KI270712v1_random | 1100 |
| chr1_KI270713v1_random | 8948 |
| chr1_KI270714v1_random | 2511 |
| chr2 | 21092445 |
| chr2_KI270715v1_random | 218 |
| chr2_KI270716v1_random | 377 |
| chr3 | 17392733 |
| chr3_GL000221v1_random | 645 |
| chr4 | 14657730 |
| chr4_GL000008v2_random | 5053 |
| chr5 | 14743350 |
| chr5_GL000208v1_random | 2622 |
| chr6 | 15261208 |
| chr7 | 13884609 |
| chr8 | 11970838 |
| chr9 | 11187904 |
| chr9_KI270717v1_random | 172 |
| chr9_KI270718v1_random | 228 |
| chr9_KI270719v1_random | 3277 |
| chr9_KI270720v1_random | 1299 |
| chr10 | 11977504 |
| chr11 | 13820321 |
| chr11_KI270721v1_random | 871 |
| chr12 | 12864009 |
| chr13 | 7418013 |
| chr14 | 8625506 |
| chr14_GL000009v2_random | 3436 |
| chr14_GL000194v1_random | 5234 |
| chr14_GL000225v1_random | 8945 |
| chr14_KI270722v1_random | 2687 |
| chr14_KI270723v1_random | 1078 |
| chr14_KI270724v1_random | 594 |
| chr14_KI270725v1_random | 1818 |
| chr14_KI270726v1_random | 705 |
| chr15 | 7725302 |
| chr15_KI270727v1_random | 491 |
| chr16 | 8889884 |
| chr16_KI270728v1_random | 1829 |
| chr17 | 11189545 |
| chr17_GL000205v2_random | 21972 |
| chr17_KI270729v1_random | 7756 |
| chr17_KI270730v1_random | 1638 |
| chr18 | 5862388 |
| chr19 | 10361671 |
| chr20 | 6381038 |
| chr21 | 3190932 |
| chr22 | 4943477 |
| chr22_KI270731v1_random | 217 |
| chr22_KI270732v1_random | 1861 |
| chr22_KI270733v1_random | 47548 |
| chr22_KI270734v1_random | 633 |
| chr22_KI270735v1_random | 2641 |
| chr22_KI270736v1_random | 6462 |
| chr22_KI270737v1_random | 652 |
| chr22_KI270738v1_random | 1915 |
| chr22_KI270739v1_random | 15 |
| chrM | 3705768 |
| chrUn_GL000195v1 | 17299 |
| chrUn_GL000213v1 | 181 |
| chrUn_GL000214v1 | 1093 |
| chrUn_GL000216v2 | 3097 |
| chrUn_GL000218v1 | 4644 |
| chrUn_GL000219v1 | 10628 |
| chrUn_GL000220v1 | 6325 |
| chrUn_GL000224v1 | 6543 |
| chrUn_GL000226v1 | 29 |
| chrUn_KI270302v1 | 6 |
| chrUn_KI270303v1 | 15 |
| chrUn_KI270304v1 | 13 |
| chrUn_KI270305v1 | 14 |
| chrUn_KI270310v1 | 32 |
| chrUn_KI270311v1 | 9 |
| chrUn_KI270312v1 | 4 |
| chrUn_KI270315v1 | 7 |
| chrUn_KI270316v1 | 4 |
| chrUn_KI270317v1 | 5 |
| chrUn_KI270320v1 | 91 |
| chrUn_KI270322v1 | 46 |
| chrUn_KI270330v1 | 215 |
| chrUn_KI270333v1 | 190 |
| chrUn_KI270336v1 | 113 |
| chrUn_KI270337v1 | 296 |
| chrUn_KI270362v1 | 24 |
| chrUn_KI270363v1 | 19 |
| chrUn_KI270364v1 | 2 |
| chrUn_KI270366v1 | 11 |
| chrUn_KI270378v1 | 2 |
| chrUn_KI270382v1 | 7 |
| chrUn_KI270384v1 | 5 |
| chrUn_KI270385v1 | 4 |
| chrUn_KI270386v1 | 1 |
| chrUn_KI270388v1 | 1 |
| chrUn_KI270390v1 | 2 |
| chrUn_KI270391v1 | 1 |
| chrUn_KI270393v1 | 4 |
| chrUn_KI270394v1 | 4 |
| chrUn_KI270395v1 | 1 |
| chrUn_KI270411v1 | 15 |
| chrUn_KI270412v1 | 7 |
| chrUn_KI270414v1 | 20 |
| chrUn_KI270417v1 | 64 |
| chrUn_KI270418v1 | 24 |
| chrUn_KI270419v1 | 8 |
| chrUn_KI270420v1 | 41 |
| chrUn_KI270422v1 | 42 |
| chrUn_KI270423v1 | 18 |
| chrUn_KI270424v1 | 1 |
| chrUn_KI270425v1 | 4 |
| chrUn_KI270429v1 | 99 |
| chrUn_KI270435v1 | 2620 |
| chrUn_KI270438v1 | 23413 |
| chrUn_KI270442v1 | 17063 |
| chrUn_KI270448v1 | 353 |
| chrUn_KI270465v1 | 35 |
| chrUn_KI270466v1 | 2226 |
| chrUn_KI270467v1 | 6113 |
| chrUn_KI270468v1 | 220 |
| chrUn_KI270507v1 | 397 |
| chrUn_KI270508v1 | 146 |
| chrUn_KI270509v1 | 142 |
| chrUn_KI270510v1 | 100 |
| chrUn_KI270511v1 | 352 |
| chrUn_KI270512v1 | 521 |
| chrUn_KI270515v1 | 426 |
| chrUn_KI270516v1 | 83 |
| chrUn_KI270517v1 | 231 |
| chrUn_KI270518v1 | 131 |
| chrUn_KI270519v1 | 4387 |
| chrUn_KI270521v1 | 167 |
| chrUn_KI270522v1 | 83 |
| chrUn_KI270528v1 | 2 |
| chrUn_KI270529v1 | 4 |
| chrUn_KI270530v1 | 7 |
| chrUn_KI270538v1 | 2704 |
| chrUn_KI270539v1 | 6 |
| chrUn_KI270544v1 | 17 |
| chrUn_KI270579v1 | 23 |
| chrUn_KI270580v1 | 114 |
| chrUn_KI270581v1 | 1 |
| chrUn_KI270582v1 | 29 |
| chrUn_KI270583v1 | 111 |
| chrUn_KI270584v1 | 344 |
| chrUn_KI270587v1 | 49 |
| chrUn_KI270588v1 | 391 |
| chrUn_KI270589v1 | 381 |
| chrUn_KI270590v1 | 297 |
| chrUn_KI270591v1 | 504 |
| chrUn_KI270593v1 | 122 |
| chrUn_KI270741v1 | 97 |
| chrUn_KI270742v1 | 2460 |
| chrUn_KI270743v1 | 2730 |
| chrUn_KI270744v1 | 5332 |
| chrUn_KI270745v1 | 251 |
| chrUn_KI270746v1 | 3329 |
| chrUn_KI270747v1 | 305 |
| chrUn_KI270748v1 | 131 |
| chrUn_KI270749v1 | 2180 |
| chrUn_KI270750v1 | 3925 |
| chrUn_KI270751v1 | 3513 |
| chrUn_KI270753v1 | 375 |
| chrUn_KI270754v1 | 784 |
| chrUn_KI270755v1 | 242 |
| chrUn_KI270756v1 | 912 |
| chrUn_KI270757v1 | 1561 |
| chrX | 6276150 |
| chrY | 387948 |
| chrY_KI270740v1_random | 297 |
Fragment lengths
| fragments | min | max | mean | median | |
|---|---|---|---|---|---|
| fragments | 267716945 | 7 | 1992 | 274.99 | 206 |
×
Files
| Filename | Size | md5 |
|---|---|---|
| T53_b10_Stomach_PCW20.fragments.tsv.gz | 2.58 GB | 0c44754a5fa81841aee3227ca22f4423 |
| T53_b10_Stomach_PCW20.fragments.tsv.gz.tbi | 1.26 MB | a4da8c54e1089aad1a594c8db9d231f4 |
| fragment_count_dist_plot.py | 853.0 B | 9d735ee8c687286d50484e7f1e398e60 |
| genomic_resource.yaml | 1.45 KB | 35d4d40dfb88e84e4af495837f530b7b |
| statistics/ |