Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Adrenal/c0/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Adrenal for cell cluster c0
Description
Labels
  • assay: SHARE-seq
  • cluster: Adrenal_c0
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Adrenal
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Adrenal_c0_mean_counts_contribs float

liu2026Multiomics_Adrenal_c0_mean_counts_contribs

base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
HISTOGRAM FOR liu2026Multiomics_Adrenal_c0_mean_counts_contribs [-0.0803, 0.215]
n
194,536,348
mean
0.000298
sd
0.00489

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1945363486.06% 193007699
chr1 17719352 7.12% 17580178
chr2 15845699 6.54% 15719312
chr3 13120086 6.62% 13014943
chr4 9683087 5.09% 9601852
chr5 11029845 6.08% 10941890
chr6 11513245 6.74% 11421126
chr7 10492267 6.58% 10408588
chr8 9002642 6.20% 8931611
chr9 8435696 6.10% 8371039
chr10 9106901 6.81% 9034874
chr11 9664001 7.15% 9590418
chr12 9418983 7.07% 9344778
chr13 5692654 4.98% 5646122
chr14 6242340 5.83% 6193490
chr15 5931186 5.82% 5885185
chr16 6136959 6.79% 6092304
chr17 7972573 9.58% 7913719
chr18 4442574 5.53% 4405076
chr19 6476463 11.05% 6432084
chr20 5155361 8.00% 5117125
chr21 2299854 4.92% 2280568
chr22 3702350 7.29% 3676027
chrX 5201587 3.33% 5159357
chrY 250643 0.44% 246033
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 193007699 1 2474 1.01 1
global segment-length histogram

Files

Filename Size md5
Adrenal_c0__mean_counts_contribs.bw 1.17 GB b67b49e0a389803d8e03feec24af24fb
genomic_resource.yaml 1.32 KB c04fdf0e504265866e3793fb2e2746bb
statistics/