Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Adrenal/c1/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Adrenal for cell cluster c1
Description
Labels
  • assay: SHARE-seq
  • cluster: Adrenal_c1
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Adrenal
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Adrenal_c1_mean_pred_corrected float

liu2026Multiomics_Adrenal_c1_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Adrenal_c1_mean_pred_corrected [0.000501, 2.26]
n
44,166,899
mean
0.0316
sd
0.0485

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 441668991.38% 44166884
chr1 4172251 1.68% 4172249
chr2 3429832 1.42% 3429831
chr3 2816517 1.42% 2816516
chr4 1927165 1.01% 1927165
chr5 2289688 1.26% 2289687
chr6 2518014 1.47% 2518012
chr7 2308201 1.45% 2308200
chr8 1909436 1.32% 1909435
chr9 1896936 1.37% 1896936
chr10 1962227 1.47% 1962227
chr11 2357850 1.75% 2357849
chr12 2161943 1.62% 2161943
chr13 1124668 0.98% 1124667
chr14 1405368 1.31% 1405368
chr15 1434118 1.41% 1434117
chr16 1589312 1.76% 1589312
chr17 2091508 2.51% 2091507
chr18 915078 1.14% 915078
chr19 2105440 3.59% 2105439
chr20 1220074 1.89% 1220074
chr21 463528 0.99% 463528
chr22 932640 1.84% 932639
chrX 1134105 0.73% 1134105
chrY 1000 <0.01% 1000
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 44166884 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Adrenal_c1__mean_pred_corrected.bw 335.84 MB fff7b03c6e297e7a8b297d02d4b2c77a
genomic_resource.yaml 1.28 KB 68735ec3defb3540fb31d95e63c897e4
statistics/