Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Adrenal/c3/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Adrenal for cell cluster c3
Description
Labels
  • assay: SHARE-seq
  • cluster: Adrenal_c3
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Adrenal
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Adrenal_c3_mean_counts_contribs float

liu2026Multiomics_Adrenal_c3_mean_counts_contribs

base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
HISTOGRAM FOR liu2026Multiomics_Adrenal_c3_mean_counts_contribs [-0.0362, 0.12]
n
108,661,058
mean
0.000104
sd
0.00352

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1086610583.39% 107794908
chr1 10181264 4.09% 10101428
chr2 8649132 3.57% 8579237
chr3 6904308 3.48% 6847697
chr4 4873763 2.56% 4831245
chr5 5838975 3.22% 5791168
chr6 6112096 3.58% 6062498
chr7 5799534 3.64% 5752989
chr8 4903787 3.38% 4864095
chr9 4670613 3.37% 4634341
chr10 5055125 3.78% 5015223
chr11 5539165 4.10% 5496016
chr12 5356481 4.02% 5313212
chr13 3039540 2.66% 3014236
chr14 3439664 3.21% 3412269
chr15 3359147 3.29% 3332847
chr16 3768998 4.17% 3741384
chr17 5025011 6.04% 4987546
chr18 2303978 2.87% 2284479
chr19 4637471 7.91% 4605034
chr20 2879234 4.47% 2857670
chr21 1283805 2.75% 1272022
chr22 2280650 4.49% 2263591
chrX 2653903 1.70% 2632335
chrY 105414 0.18% 102346
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 107794908 1 2114 1.01 1
global segment-length histogram

Files

Filename Size md5
Adrenal_c3__mean_counts_contribs.bw 667.4 MB 23e4b5bb8bc6d8ee3735dfcdec6a93c0
genomic_resource.yaml 1.32 KB f012a66e70935e443a03b922b8f2eb3b
statistics/