Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Adrenal/c3/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Adrenal for cell cluster c3
Description
Labels
  • assay: SHARE-seq
  • cluster: Adrenal_c3
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Adrenal
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Adrenal_c3_mean_pred_corrected float

liu2026Multiomics_Adrenal_c3_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Adrenal_c3_mean_pred_corrected [0.000506, 2.02]
n
55,637,466
mean
0.0409
sd
0.0576

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 556374661.73% 55636525
chr1 5222555 2.10% 5222553
chr2 4407708 1.82% 4407708
chr3 3538326 1.78% 3538325
chr4 2491291 1.31% 2491291
chr5 2978485 1.64% 2978482
chr6 3146163 1.84% 3146163
chr7 2958870 1.86% 2958868
chr8 2493257 1.72% 2493257
chr9 2390634 1.73% 2390634
chr10 2585342 1.93% 2585342
chr11 2842318 2.10% 2842317
chr12 2751062 2.06% 2751062
chr13 1548209 1.35% 1548209
chr14 1756050 1.64% 1756049
chr15 1720130 1.69% 1720130
chr16 1942086 2.15% 1942086
chr17 2587848 3.11% 2587848
chr18 1173765 1.46% 1173765
chr19 2418299 4.13% 2418299
chr20 1468400 2.28% 1468400
chr21 655629 1.40% 655628
chr22 1154884 2.27% 1154884
chrX 1353771 0.87% 1353771
chrY 52384 0.09% 51454
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 55636525 1 910 1 1
global segment-length histogram

Files

Filename Size md5
Adrenal_c3__mean_pred_corrected.bw 422.75 MB c3d01cf00413158591bc21801cc71c92
genomic_resource.yaml 1.28 KB 032ddc5b5b7c9e784087ea11ea054eb6
statistics/