Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Brain/c0/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Brain for cell cluster c0
Description
Labels
  • assay: SHARE-seq
  • cluster: Brain_c0
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Brain
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Brain_c0_mean_pred_corrected float

liu2026Multiomics_Brain_c0_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Brain_c0_mean_pred_corrected [0.000211, 35.7]
n
86,872,759
mean
0.173
sd
0.396

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 868727592.71% 86871787
chr1 8007839 3.22% 8007833
chr2 7156985 2.96% 7156983
chr3 5544268 2.80% 5544264
chr4 4054611 2.13% 4054610
chr5 4799350 2.64% 4799348
chr6 4892440 2.86% 4892439
chr7 4713116 2.96% 4713116
chr8 4101237 2.83% 4101233
chr9 3701919 2.67% 3701917
chr10 4028836 3.01% 4028835
chr11 4689554 3.47% 4689553
chr12 4320529 3.24% 4320527
chr13 2253342 1.97% 2253342
chr14 2865456 2.68% 2865455
chr15 2738395 2.68% 2738395
chr16 2908548 3.22% 2908547
chr17 3749039 4.50% 3749032
chr18 2093323 2.60% 2093323
chr19 2926073 4.99% 2926072
chr20 2420663 3.76% 2420661
chr21 923452 1.98% 923451
chr22 1755745 3.45% 1755744
chrX 2213468 1.42% 2213468
chrY 14571 0.03% 13639
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 86871787 1 728 1 1
global segment-length histogram

Files

Filename Size md5
Brain_c0__mean_pred_corrected.bw 659.9 MB f39a919d9103babccfde54a6e5779ff0
genomic_resource.yaml 1.27 KB a700a512e7f493e77e991ffd6ec82941
statistics/