Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Brain/c1/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Brain for cell cluster c1 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Brain_c1_mean_counts_contribs | float |
liu2026Multiomics_Brain_c1_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0687, 0.204] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 245092772 | 7.64% | 243729770 |
| chr1 | 22875031 | 9.19% | 22750547 |
| chr2 | 20578430 | 8.50% | 20463074 |
| chr3 | 16112421 | 8.13% | 16021231 |
| chr4 | 11198211 | 5.89% | 11131141 |
| chr5 | 13499974 | 7.44% | 13423165 |
| chr6 | 14258718 | 8.35% | 14179139 |
| chr7 | 13143320 | 8.25% | 13069787 |
| chr8 | 11739295 | 8.09% | 11673688 |
| chr9 | 10515220 | 7.60% | 10456770 |
| chr10 | 11819252 | 8.83% | 11753041 |
| chr11 | 13256279 | 9.81% | 13185419 |
| chr12 | 11622859 | 8.72% | 11558411 |
| chr13 | 6444593 | 5.64% | 6407835 |
| chr14 | 7970133 | 7.45% | 7926286 |
| chr15 | 7809477 | 7.66% | 7766694 |
| chr16 | 8272595 | 9.16% | 8227764 |
| chr17 | 10406573 | 12.50% | 10351937 |
| chr18 | 5710809 | 7.11% | 5676977 |
| chr19 | 7855948 | 13.40% | 7815737 |
| chr20 | 6771226 | 10.51% | 6735107 |
| chr21 | 2701446 | 5.78% | 2684852 |
| chr22 | 5029604 | 9.90% | 5003881 |
| chrX | 5418212 | 3.47% | 5387985 |
| chrY | 83146 | 0.15% | 79302 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 243729770 | 1 | 2564 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Brain_c1__mean_counts_contribs.bw | 1.47 GB | 7ebc92128a4ea26732852c8c05fc78a3 |
| genomic_resource.yaml | 1.31 KB | 077d6c567e4cbde0e9eaa8fd06a3a5a9 |
| statistics/ |
