Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Brain/c10/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Brain for cell cluster c10
Description
Labels
  • assay: SHARE-seq
  • cluster: Brain_c10
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Brain
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Brain_c10_mean_pred_corrected float

liu2026Multiomics_Brain_c10_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Brain_c10_mean_pred_corrected [0.00143, 12.4]
n
45,208,329
mean
0.0889
sd
0.173

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 452083291.41% 45207386
chr1 4341254 1.74% 4341251
chr2 3594167 1.48% 3594167
chr3 2823190 1.42% 2823189
chr4 1896872 1.00% 1896870
chr5 2369243 1.31% 2369242
chr6 2541006 1.49% 2541006
chr7 2378509 1.49% 2378508
chr8 2008821 1.38% 2008821
chr9 1870762 1.35% 1870762
chr10 1988506 1.49% 1988505
chr11 2524493 1.87% 2524493
chr12 2294387 1.72% 2294387
chr13 1085589 0.95% 1085588
chr14 1523903 1.42% 1523903
chr15 1448107 1.42% 1448107
chr16 1598636 1.77% 1598635
chr17 2138908 2.57% 2138908
chr18 968199 1.20% 968199
chr19 2048944 3.50% 2048943
chr20 1243674 1.93% 1243674
chr21 414819 0.89% 414819
chr22 981003 1.93% 981003
chrX 1114582 0.71% 1114582
chrY 10755 0.02% 9824
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 45207386 1 911 1 1
global segment-length histogram

Files

Filename Size md5
Brain_c10__mean_pred_corrected.bw 343.28 MB 6b67fb5756897b38e53e76bf15d65a1d
genomic_resource.yaml 1.28 KB 3dafc7157127734f07ddbeaf99623c59
statistics/