Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Brain/c11/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Brain for cell cluster c11
Description
Labels
  • assay: SHARE-seq
  • cluster: Brain_c11
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Brain
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Brain_c11_mean_pred_corrected float

liu2026Multiomics_Brain_c11_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Brain_c11_mean_pred_corrected [0.00103, 11.9]
n
57,378,264
mean
0.101
sd
0.198

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 573782641.79% 57378247
chr1 5453477 2.19% 5453475
chr2 4527010 1.87% 4527007
chr3 3625973 1.83% 3625972
chr4 2383181 1.25% 2383181
chr5 3049384 1.68% 3049384
chr6 3313710 1.94% 3313709
chr7 2863937 1.80% 2863937
chr8 2439328 1.68% 2439327
chr9 2484190 1.80% 2484190
chr10 2847846 2.13% 2847845
chr11 3162766 2.34% 3162766
chr12 2727108 2.05% 2727106
chr13 1297671 1.13% 1297670
chr14 1785318 1.67% 1785317
chr15 1950039 1.91% 1950039
chr16 2063682 2.28% 2063682
chr17 2888885 3.47% 2888884
chr18 1231886 1.53% 1231886
chr19 2482316 4.23% 2482314
chr20 1634048 2.54% 1634048
chr21 626455 1.34% 626454
chr22 1157270 2.28% 1157270
chrX 1345313 0.86% 1345313
chrY 37471 0.07% 37471
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 57378247 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Brain_c11__mean_pred_corrected.bw 435.52 MB a8bfbf777a8fce3c4b04a9f36ff17a01
genomic_resource.yaml 1.28 KB 13fdf067e69b5fba61fec060764ec7a5
statistics/