Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Brain/c12/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Brain for cell cluster c12 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Brain_c12_mean_counts_contribs | float |
liu2026Multiomics_Brain_c12_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0589, 0.132] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 106879159 | 3.33% | 106112562 |
| chr1 | 10204444 | 4.10% | 10131437 |
| chr2 | 8337830 | 3.44% | 8278154 |
| chr3 | 7218948 | 3.64% | 7167219 |
| chr4 | 4815721 | 2.53% | 4780228 |
| chr5 | 5968139 | 3.29% | 5925143 |
| chr6 | 6229180 | 3.65% | 6184847 |
| chr7 | 5704339 | 3.58% | 5663285 |
| chr8 | 5290173 | 3.64% | 5251621 |
| chr9 | 4471026 | 3.23% | 4439313 |
| chr10 | 4908930 | 3.67% | 4873239 |
| chr11 | 5791929 | 4.29% | 5751187 |
| chr12 | 5162794 | 3.87% | 5126056 |
| chr13 | 2662140 | 2.33% | 2642801 |
| chr14 | 3417538 | 3.19% | 3393162 |
| chr15 | 3404171 | 3.34% | 3380027 |
| chr16 | 3595814 | 3.98% | 3570400 |
| chr17 | 4525980 | 5.44% | 4493737 |
| chr18 | 2341646 | 2.91% | 2324867 |
| chr19 | 4126000 | 7.04% | 4098052 |
| chr20 | 2807971 | 4.36% | 2787947 |
| chr21 | 1128191 | 2.42% | 1119148 |
| chr22 | 2107850 | 4.15% | 2093052 |
| chrX | 2578768 | 1.65% | 2560652 |
| chrY | 79637 | 0.14% | 76988 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 106112562 | 1 | 2114 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Brain_c12__mean_counts_contribs.bw | 657.26 MB | 795be30278c04d6d8fa25a5d5b446b0a |
| genomic_resource.yaml | 1.31 KB | b95aac15962ab7c70486f1de42db99de |
| statistics/ |
