Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Brain/c12/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Brain for cell cluster c12
Description
Labels
  • assay: SHARE-seq
  • cluster: Brain_c12
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Brain
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Brain_c12_obs_pval_signal float

liu2026Multiomics_Brain_c12_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Brain_c12_obs_pval_signal [0, 975]
n
3,087,249,221
mean
0.411
sd
1.8

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308724922196.20% 43069467
chr1 248946468 >99.99% 3996295
chr2 242181931 >99.99% 3297374
chr3 198190513 99.95% 2714047
chr4 190203596 99.99% 1917294
chr5 181473637 99.96% 2266739
chr6 170743271 99.96% 2343868
chr7 159335736 99.99% 2278348
chr8 145078545 99.96% 2062212
chr9 138313720 99.94% 1856566
chr10 133787415 99.99% 1978405
chr11 135076116 99.99% 2333053
chr12 133265010 99.99% 2113884
chr13 114353839 99.99% 1057373
chr14 106883676 99.85% 1357716
chr15 101981137 99.99% 1284839
chr16 90225994 99.88% 1629971
chr17 83247360 99.99% 2094061
chr18 80263204 99.86% 899228
chr19 58607588 99.98% 1990653
chr20 64334025 99.83% 1189810
chr21 46699959 99.98% 458170
chr22 50808344 99.98% 1136399
chrX 156030780 99.99% 775143
chrY 57217357 99.98% 38019
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 43069467 1 30001352 71.68 20
global segment-length histogram

Files

Filename Size md5
Brain_c12__obs_pval_signal.bw 250.18 MB 0f6767e8c643278394f9d05f5f113a98
genomic_resource.yaml 1.24 KB 70ee862a0f9eac7f5df9903af804c31d
statistics/