Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Brain/c13/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Brain for cell cluster c13 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Brain_c13_mean_counts_contribs | float |
liu2026Multiomics_Brain_c13_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.093, 0.332] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 166960485 | 5.20% | 165895198 |
| chr1 | 16220900 | 6.52% | 16118612 |
| chr2 | 13531189 | 5.59% | 13443780 |
| chr3 | 10752565 | 5.42% | 10681896 |
| chr4 | 7899267 | 4.15% | 7845005 |
| chr5 | 8653757 | 4.77% | 8596888 |
| chr6 | 9771153 | 5.72% | 9708068 |
| chr7 | 8558773 | 5.37% | 8503841 |
| chr8 | 7191025 | 4.95% | 7144241 |
| chr9 | 7151562 | 5.17% | 7106556 |
| chr10 | 7960761 | 5.95% | 7910728 |
| chr11 | 8861490 | 6.56% | 8806759 |
| chr12 | 7840766 | 5.88% | 7790116 |
| chr13 | 4262869 | 3.73% | 4234468 |
| chr14 | 5529878 | 5.17% | 5495122 |
| chr15 | 5567991 | 5.46% | 5532382 |
| chr16 | 5634498 | 6.24% | 5600896 |
| chr17 | 7645433 | 9.18% | 7599472 |
| chr18 | 3535250 | 4.40% | 3512418 |
| chr19 | 6169665 | 10.53% | 6134218 |
| chr20 | 4248321 | 6.59% | 4222457 |
| chr21 | 2004851 | 4.29% | 1991583 |
| chr22 | 3530407 | 6.95% | 3509542 |
| chrX | 4275926 | 2.74% | 4248502 |
| chrY | 162188 | 0.28% | 157648 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 165895198 | 1 | 2114 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Brain_c13__mean_counts_contribs.bw | 1.0 GB | a12ed59944730396e44ddf5b4ce54fbc |
| genomic_resource.yaml | 1.31 KB | 9eef2c3bc404f503662cefbc2d8ee715 |
| statistics/ |
