Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Brain/c13/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Brain for cell cluster c13
Description
Labels
  • assay: SHARE-seq
  • cluster: Brain_c13
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Brain
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Brain_c13_mean_pred_corrected float

liu2026Multiomics_Brain_c13_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Brain_c13_mean_pred_corrected [0.000883, 17.5]
n
86,681,293
mean
0.118
sd
0.287

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 866812932.70% 86680107
chr1 8452445 3.40% 8452442
chr2 6984062 2.88% 6984060
chr3 5558613 2.80% 5558609
chr4 4067546 2.14% 4067544
chr5 4446372 2.45% 4446369
chr6 5077831 2.97% 5077830
chr7 4421316 2.77% 4421315
chr8 3699831 2.55% 3699830
chr9 3710404 2.68% 3710404
chr10 4107079 3.07% 4107077
chr11 4626597 3.42% 4626596
chr12 4065693 3.05% 4065691
chr13 2194091 1.92% 2194090
chr14 2881576 2.69% 2881575
chr15 2880477 2.82% 2880476
chr16 2947748 3.26% 2947747
chr17 4048534 4.86% 4048533
chr18 1812648 2.26% 1812647
chr19 3314097 5.65% 3314095
chr20 2209273 3.43% 2209273
chr21 1045655 2.24% 1045655
chr22 1835882 3.61% 1835881
chrX 2209089 1.42% 2209087
chrY 84434 0.15% 83281
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 86680107 1 911 1 1
global segment-length histogram

Files

Filename Size md5
Brain_c13__mean_pred_corrected.bw 659.49 MB 26726e12c352f3ee6cfd34336d7cbb3a
genomic_resource.yaml 1.28 KB b160ea34d85acec0f76ae888029df23b
statistics/