Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Brain/c14/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Brain for cell cluster c14 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Brain_c14_mean_counts_contribs | float |
liu2026Multiomics_Brain_c14_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0456, 0.143] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 84815152 | 2.64% | 84189494 |
| chr1 | 7531612 | 3.03% | 7476055 |
| chr2 | 7074425 | 2.92% | 7021453 |
| chr3 | 5545655 | 2.80% | 5504051 |
| chr4 | 4101838 | 2.16% | 4069092 |
| chr5 | 4699871 | 2.59% | 4665450 |
| chr6 | 5010607 | 2.93% | 4974167 |
| chr7 | 4522658 | 2.84% | 4489281 |
| chr8 | 3947630 | 2.72% | 3918705 |
| chr9 | 3507607 | 2.53% | 3480350 |
| chr10 | 3706145 | 2.77% | 3678005 |
| chr11 | 4512642 | 3.34% | 4479979 |
| chr12 | 4279851 | 3.21% | 4248445 |
| chr13 | 2241160 | 1.96% | 2224653 |
| chr14 | 2711116 | 2.53% | 2691359 |
| chr15 | 2615159 | 2.56% | 2596524 |
| chr16 | 2935780 | 3.25% | 2915157 |
| chr17 | 3615314 | 4.34% | 3589816 |
| chr18 | 1952524 | 2.43% | 1936303 |
| chr19 | 3364342 | 5.74% | 3341215 |
| chr20 | 2227943 | 3.46% | 2212104 |
| chr21 | 890454 | 1.91% | 883944 |
| chr22 | 1629113 | 3.21% | 1617387 |
| chrX | 2176528 | 1.39% | 2160910 |
| chrY | 15178 | 0.03% | 15089 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 84189494 | 1 | 972 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Brain_c14__mean_counts_contribs.bw | 521.6 MB | 262c9eb3d4b809e92f065df512d11742 |
| genomic_resource.yaml | 1.31 KB | 674821d9f4ff74b831599891ea4f31e1 |
| statistics/ |
