Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Brain/c14/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Brain for cell cluster c14
Description
Labels
  • assay: SHARE-seq
  • cluster: Brain_c14
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Brain
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Brain_c14_obs_pval_signal float

liu2026Multiomics_Brain_c14_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Brain_c14_obs_pval_signal [0, 226]
n
3,087,082,172
mean
0.577
sd
0.861

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308708217296.19% 10667265
chr1 248946468 >99.99% 1013726
chr2 242183500 >99.99% 853802
chr3 198220301 99.96% 635124
chr4 190204545 99.99% 437347
chr5 181473277 99.96% 541626
chr6 170612206 99.89% 565458
chr7 159335901 99.99% 585271
chr8 145075728 99.96% 488415
chr9 138256038 99.90% 477135
chr10 133787415 99.99% 468459
chr11 135076591 99.99% 620746
chr12 133264641 99.99% 532976
chr13 114353000 99.99% 231230
chr14 106883428 99.85% 340984
chr15 101981061 99.99% 296347
chr16 90224781 99.87% 410336
chr17 83247308 99.99% 536433
chr18 80263234 99.86% 208238
chr19 58607581 99.98% 562477
chr20 64328835 99.82% 301167
chr21 46699953 99.98% 106511
chr22 50808344 99.98% 287990
chrX 156030684 99.99% 165015
chrY 57217352 99.98% 452
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 10667265 1 30014859 289.4 33
global segment-length histogram

Files

Filename Size md5
Brain_c14__obs_pval_signal.bw 60.83 MB 2316fe9aa35ada8cda08b54db8d33513
genomic_resource.yaml 1.24 KB 487bbed9af1e70815dde81f086460d11
statistics/