Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Brain/c15/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Brain for cell cluster c15
Description
Labels
  • assay: SHARE-seq
  • cluster: Brain_c15
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Brain
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Brain_c15_obs_pval_signal float

liu2026Multiomics_Brain_c15_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Brain_c15_obs_pval_signal [2e-05, 229]
n
3,086,923,062
mean
0.738
sd
0.699

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308692306296.19% 11949606
chr1 248946444 >99.99% 1104879
chr2 242183500 >99.99% 945881
chr3 198178885 99.94% 763672
chr4 190123127 99.95% 546442
chr5 181477052 99.97% 648924
chr6 170630798 99.90% 647954
chr7 159331244 99.99% 633973
chr8 145077812 99.96% 544516
chr9 138220929 99.87% 515367
chr10 133787373 99.99% 532401
chr11 135076518 99.99% 663617
chr12 133263663 99.99% 571759
chr13 114353900 99.99% 298555
chr14 106883394 99.85% 393312
chr15 101981107 99.99% 351863
chr16 90214812 99.86% 433508
chr17 83235012 99.97% 570836
chr18 80263228 99.86% 254829
chr19 58607415 99.98% 541540
chr20 64330460 99.82% 313478
chr21 46699977 99.98% 128228
chr22 50808344 99.98% 277935
chrX 156030774 99.99% 262721
chrY 57217294 99.98% 3416
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 11949606 1 30014214 258.33 85
global segment-length histogram

Files

Filename Size md5
Brain_c15__obs_pval_signal.bw 66.2 MB 78df2597f84a76e63edeadb258c37c6e
genomic_resource.yaml 1.24 KB 74358b4c4ee0bad7d59458ca3af61922
statistics/