Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Brain/c16/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Brain for cell cluster c16 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Brain_c16_mean_counts_contribs | float |
liu2026Multiomics_Brain_c16_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0351, 0.0919] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 95686536 | 2.98% | 94735622 |
| chr1 | 9128082 | 3.67% | 9037406 |
| chr2 | 7550514 | 3.12% | 7474766 |
| chr3 | 6015388 | 3.03% | 5954497 |
| chr4 | 4405346 | 2.32% | 4358941 |
| chr5 | 5300342 | 2.92% | 5246720 |
| chr6 | 5659034 | 3.31% | 5602581 |
| chr7 | 5058990 | 3.17% | 5008455 |
| chr8 | 4250447 | 2.93% | 4207940 |
| chr9 | 4060427 | 2.93% | 4020598 |
| chr10 | 4490632 | 3.36% | 4445595 |
| chr11 | 5180096 | 3.83% | 5129403 |
| chr12 | 4840874 | 3.63% | 4792971 |
| chr13 | 2410067 | 2.11% | 2385436 |
| chr14 | 2885737 | 2.70% | 2857487 |
| chr15 | 3137522 | 3.08% | 3106790 |
| chr16 | 3292787 | 3.64% | 3262006 |
| chr17 | 4298880 | 5.16% | 4258019 |
| chr18 | 1958179 | 2.44% | 1936563 |
| chr19 | 3990165 | 6.81% | 3954850 |
| chr20 | 2522135 | 3.91% | 2497610 |
| chr21 | 1075855 | 2.30% | 1065405 |
| chr22 | 1874437 | 3.69% | 1856746 |
| chrX | 2282111 | 1.46% | 2259078 |
| chrY | 18489 | 0.03% | 15759 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 94735622 | 1 | 2585 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Brain_c16__mean_counts_contribs.bw | 587.46 MB | 03af533bea41a920eeba5be06231966d |
| genomic_resource.yaml | 1.31 KB | a1a602b268c4017b556c934bf079577a |
| statistics/ |
