Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Brain/c16/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Brain for cell cluster c16
Description
Labels
  • assay: SHARE-seq
  • cluster: Brain_c16
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Brain
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Brain_c16_obs_pval_signal float

liu2026Multiomics_Brain_c16_obs_pval_signal
Macs2 p-value signal track for observed accessibility
 HISTOGRAM FOR liu2026Multiomics_Brain_c16_obs_pval_signal [0, 1.05e+03]
n
3,087,127,449
mean
0.631
sd
1

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308712744996.19% 20615465
chr1 248946432 >99.99% 1925250
chr2 242183500 >99.99% 1625653
chr3 198190219 99.95% 1279124
chr4 190204559 99.99% 923786
chr5 181473637 99.96% 1097766
chr6 170739807 99.96% 1147902
chr7 159335531 99.99% 1062543
chr8 145076001 99.96% 901407
chr9 138242212 99.89% 886481
chr10 133787434 99.99% 947323
chr11 135075598 99.99% 1108153
chr12 133264895 99.99% 1009068
chr13 114353002 99.99% 531653
chr14 106883499 99.85% 647212
chr15 101980879 99.99% 630150
chr16 90197289 99.84% 778973
chr17 83247265 99.99% 994210
chr18 80263248 99.86% 420066
chr19 58606751 99.98% 954177
chr20 64332074 99.83% 547704
chr21 46687132 99.95% 230300
chr22 50808344 99.98% 496002
chrX 156030846 99.99% 464639
chrY 57217295 99.98% 5923
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 20615465 1 30063203 149.75 43
global segment-length histogram

Files

Filename Size md5
Brain_c16__obs_pval_signal.bw 116.89 MB f64242a44b1018e32db3d2de501950ae
genomic_resource.yaml 1.24 KB 226455438dd207db302ca498760f917b
statistics/