Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Brain/c2/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Brain for cell cluster c2 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Brain_c2_mean_counts_contribs | float |
liu2026Multiomics_Brain_c2_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.088, 0.164] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 144895881 | 4.51% | 143962130 |
| chr1 | 13311548 | 5.35% | 13225418 |
| chr2 | 12032413 | 4.97% | 11954710 |
| chr3 | 9678544 | 4.88% | 9615627 |
| chr4 | 6980897 | 3.67% | 6933590 |
| chr5 | 8406912 | 4.63% | 8352836 |
| chr6 | 8385646 | 4.91% | 8332335 |
| chr7 | 7814562 | 4.90% | 7764564 |
| chr8 | 7032346 | 4.85% | 6987003 |
| chr9 | 6072155 | 4.39% | 6033421 |
| chr10 | 6783541 | 5.07% | 6738378 |
| chr11 | 7677344 | 5.68% | 7629053 |
| chr12 | 7112559 | 5.34% | 7067457 |
| chr13 | 3941685 | 3.45% | 3916415 |
| chr14 | 4709997 | 4.40% | 4680318 |
| chr15 | 4509882 | 4.42% | 4480669 |
| chr16 | 4778555 | 5.29% | 4748351 |
| chr17 | 5935636 | 7.13% | 5898718 |
| chr18 | 3351399 | 4.17% | 3327867 |
| chr19 | 4766620 | 8.13% | 4738308 |
| chr20 | 3689476 | 5.73% | 3666367 |
| chr21 | 1587480 | 3.40% | 1576757 |
| chr22 | 2714853 | 5.34% | 2697975 |
| chrX | 3596960 | 2.31% | 3573378 |
| chrY | 24871 | 0.04% | 22615 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 143962130 | 1 | 2114 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Brain_c2__mean_counts_contribs.bw | 891.74 MB | 1f426467fb997070e3470adda2038b79 |
| genomic_resource.yaml | 1.31 KB | 4786725a5fbb2463eca4083c98804ac9 |
| statistics/ |
