Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Brain/c2/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Brain for cell cluster c2
Description
Labels
  • assay: SHARE-seq
  • cluster: Brain_c2
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Brain
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Brain_c2_mean_pred_corrected float

liu2026Multiomics_Brain_c2_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Brain_c2_mean_pred_corrected [0.00076, 32.7]
n
76,978,491
mean
0.172
sd
0.391

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 769784912.40% 76977524
chr1 7089638 2.85% 7089636
chr2 6384518 2.64% 6384513
chr3 5105972 2.57% 5105969
chr4 3670546 1.93% 3670545
chr5 4449419 2.45% 4449416
chr6 4486126 2.63% 4486121
chr7 4128485 2.59% 4128484
chr8 3702118 2.55% 3702116
chr9 3232079 2.34% 3232078
chr10 3581876 2.68% 3581876
chr11 4100286 3.04% 4100284
chr12 3791018 2.84% 3791015
chr13 2077480 1.82% 2077480
chr14 2511856 2.35% 2511854
chr15 2388967 2.34% 2388966
chr16 2522490 2.79% 2522490
chr17 3203723 3.85% 3203722
chr18 1754907 2.18% 1754906
chr19 2630483 4.49% 2630483
chr20 1955257 3.03% 1955256
chr21 839496 1.80% 839496
chr22 1439465 2.83% 1439462
chrX 1919669 1.23% 1919667
chrY 12617 0.02% 11689
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 76977524 1 911 1 1
global segment-length histogram

Files

Filename Size md5
Brain_c2__mean_pred_corrected.bw 583.43 MB 58ced9679d6cf22c69fc3c67cfe53313
genomic_resource.yaml 1.27 KB 03038017c84c2ac868e26aa18b6ba212
statistics/