Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Brain/c2/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Brain for cell cluster c2
Description
Labels
  • assay: SHARE-seq
  • cluster: Brain_c2
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Brain
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Brain_c2_obs_pval_signal float

liu2026Multiomics_Brain_c2_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Brain_c2_obs_pval_signal [0, 1.65e+03]
n
3,087,206,903
mean
0.409
sd
3.83

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308720690396.20% 57930059
chr1 248946463 >99.99% 5456404
chr2 242183501 >99.99% 4558649
chr3 198220314 99.96% 3492022
chr4 190204555 99.99% 2373523
chr5 181477742 99.97% 3025637
chr6 170741607 99.96% 3030115
chr7 159335945 99.99% 2997877
chr8 145078496 99.96% 2673619
chr9 138237319 99.89% 2590032
chr10 133787439 99.99% 2693337
chr11 135076572 99.99% 3230622
chr12 133265011 99.99% 2897465
chr13 114353979 99.99% 1396159
chr14 106883499 99.85% 1857967
chr15 101981167 99.99% 1725694
chr16 90224694 99.87% 2329338
chr17 83247360 99.99% 2988724
chr18 80263247 99.86% 1161010
chr19 58607600 99.98% 2627024
chr20 64333874 99.83% 1615897
chr21 46699965 99.98% 664619
chr22 50808349 99.98% 1588341
chrX 156030839 99.99% 950958
chrY 57217366 99.98% 5026
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 57930059 1 30014242 53.29 11
global segment-length histogram

Files

Filename Size md5
Brain_c2__obs_pval_signal.bw 338.15 MB 2734d969faeb4de146ad75359fe45130
genomic_resource.yaml 1.23 KB b7c12dd5f3b4e4ca616b25f8c2e50f31
statistics/