Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Brain/c3/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Brain for cell cluster c3 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Brain_c3_mean_counts_contribs | float |
liu2026Multiomics_Brain_c3_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.08, 0.208] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 146968525 | 4.58% | 146079202 |
| chr1 | 13282367 | 5.34% | 13202034 |
| chr2 | 12325348 | 5.09% | 12248975 |
| chr3 | 9945317 | 5.02% | 9884761 |
| chr4 | 7233580 | 3.80% | 7186654 |
| chr5 | 8548916 | 4.71% | 8497411 |
| chr6 | 8699850 | 5.09% | 8647444 |
| chr7 | 7932707 | 4.98% | 7884944 |
| chr8 | 7252679 | 5.00% | 7209106 |
| chr9 | 6017502 | 4.35% | 5980608 |
| chr10 | 6690220 | 5.00% | 6649164 |
| chr11 | 7604233 | 5.63% | 7560049 |
| chr12 | 7347153 | 5.51% | 7303239 |
| chr13 | 4354454 | 3.81% | 4327606 |
| chr14 | 4798455 | 4.48% | 4770305 |
| chr15 | 4597633 | 4.51% | 4570214 |
| chr16 | 4720021 | 5.22% | 4692465 |
| chr17 | 5682079 | 6.82% | 5649898 |
| chr18 | 3458636 | 4.30% | 3435453 |
| chr19 | 4876625 | 8.32% | 4849714 |
| chr20 | 3708770 | 5.76% | 3687544 |
| chr21 | 1598918 | 3.42% | 1588444 |
| chr22 | 2655698 | 5.23% | 2640773 |
| chrX | 3632671 | 2.33% | 3610295 |
| chrY | 4693 | 0.01% | 2102 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 146079202 | 1 | 2579 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Brain_c3__mean_counts_contribs.bw | 904.35 MB | 72e9f00eda109c2d2983f1981534b5ed |
| genomic_resource.yaml | 1.31 KB | 8d916c4e684f51501b145effaf82a06a |
| statistics/ |
