Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Brain/c3/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Brain for cell cluster c3
Description
Labels
  • assay: SHARE-seq
  • cluster: Brain_c3
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Brain
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Brain_c3_mean_pred_corrected float

liu2026Multiomics_Brain_c3_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Brain_c3_mean_pred_corrected [0.000996, 42.7]
n
78,091,061
mean
0.207
sd
0.487

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 780910612.43% 78089645
chr1 7090091 2.85% 7090090
chr2 6497610 2.68% 6497610
chr3 5250119 2.65% 5250118
chr4 3807555 2.00% 3807551
chr5 4518623 2.49% 4518623
chr6 4620482 2.71% 4620478
chr7 4197319 2.63% 4197319
chr8 3816096 2.63% 3816094
chr9 3199341 2.31% 3199339
chr10 3537417 2.64% 3537415
chr11 4064929 3.01% 4064929
chr12 3905542 2.93% 3905541
chr13 2281964 2.00% 2281964
chr14 2554809 2.39% 2554809
chr15 2446275 2.40% 2446274
chr16 2525499 2.80% 2525499
chr17 3075972 3.69% 3075970
chr18 1806774 2.25% 1806773
chr19 2710942 4.62% 2710939
chr20 1968515 3.05% 1968514
chr21 842108 1.80% 842108
chr22 1419863 2.79% 1419863
chrX 1950751 1.25% 1950750
chrY 2465 <0.01% 1075
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 78089645 1 1376 1 1
global segment-length histogram

Files

Filename Size md5
Brain_c3__mean_pred_corrected.bw 591.88 MB 4757c48c8d07a1e743452ace581a96ce
genomic_resource.yaml 1.27 KB 393a1db12e55e1106936ce1f1752812c
statistics/