Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Brain/c3/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Brain for cell cluster c3
Description
Labels
  • assay: SHARE-seq
  • cluster: Brain_c3
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Brain
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Brain_c3_obs_pval_signal float

liu2026Multiomics_Brain_c3_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Brain_c3_obs_pval_signal [0, 2.69e+03]
n
3,087,298,788
mean
0.421
sd
4.41

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308729878896.20% 69109233
chr1 248946475 >99.99% 6421602
chr2 242183501 >99.99% 5428135
chr3 198220593 99.96% 4252098
chr4 190204502 99.99% 2986897
chr5 181475897 99.97% 3552707
chr6 170739887 99.96% 3535156
chr7 159335937 99.99% 3699485
chr8 145075546 99.96% 3132883
chr9 138334439 99.96% 3007070
chr10 133787439 99.99% 3139124
chr11 135076572 99.99% 3813925
chr12 133265010 99.99% 3410470
chr13 114354193 99.99% 1761529
chr14 106883696 99.85% 2210783
chr15 101981149 99.99% 2102117
chr16 90225616 99.88% 2684009
chr17 83247307 99.99% 3363229
chr18 80263246 99.86% 1432969
chr19 58607600 99.98% 3131170
chr20 64333659 99.83% 1978070
chr21 46699971 99.98% 732099
chr22 50808349 99.98% 1861734
chrX 156030846 99.99% 1462481
chrY 57217358 99.98% 9491
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 69109233 1 30013713 44.67 11
global segment-length histogram

Files

Filename Size md5
Brain_c3__obs_pval_signal.bw 404.24 MB 8a810845bb9cd8a2bb8a2e0deea86264
genomic_resource.yaml 1.23 KB 4728999ebd7eca7025bc4d18298d27d1
statistics/