Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Brain/c4/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Brain for cell cluster c4 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Brain_c4_mean_counts_contribs | float |
liu2026Multiomics_Brain_c4_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0308, 0.105] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 85526609 | 2.66% | 84878753 |
| chr1 | 8191395 | 3.29% | 8129068 |
| chr2 | 6778436 | 2.80% | 6727162 |
| chr3 | 5380286 | 2.71% | 5338458 |
| chr4 | 3747562 | 1.97% | 3717822 |
| chr5 | 4521894 | 2.49% | 4487356 |
| chr6 | 4748625 | 2.78% | 4712261 |
| chr7 | 4516562 | 2.83% | 4482182 |
| chr8 | 3904250 | 2.69% | 3874575 |
| chr9 | 3601991 | 2.60% | 3575091 |
| chr10 | 3809676 | 2.85% | 3780474 |
| chr11 | 4762204 | 3.53% | 4726568 |
| chr12 | 4325481 | 3.25% | 4292930 |
| chr13 | 1965983 | 1.72% | 1950944 |
| chr14 | 2813013 | 2.63% | 2792094 |
| chr15 | 2707019 | 2.65% | 2686716 |
| chr16 | 3061182 | 3.39% | 3038609 |
| chr17 | 4121399 | 4.95% | 4090832 |
| chr18 | 1835484 | 2.28% | 1820617 |
| chr19 | 3637481 | 6.21% | 3611693 |
| chr20 | 2385009 | 3.70% | 2367176 |
| chr21 | 865747 | 1.85% | 859210 |
| chr22 | 1885808 | 3.71% | 1871912 |
| chrX | 1927820 | 1.24% | 1912957 |
| chrY | 32302 | 0.06% | 32046 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 84878753 | 1 | 951 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Brain_c4__mean_counts_contribs.bw | 525.74 MB | 22437c530de82f35f65b5afe8a37a23c |
| genomic_resource.yaml | 1.31 KB | 7631080fba3e897908ae136dddd51241 |
| statistics/ |
