Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Brain/c5/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Brain for cell cluster c5
Description
Labels
  • assay: SHARE-seq
  • cluster: Brain_c5
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Brain
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Brain_c5_mean_pred_corrected float

liu2026Multiomics_Brain_c5_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Brain_c5_mean_pred_corrected [0.00149, 22.3]
n
68,286,002
mean
0.152
sd
0.331

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 682860022.13% 68284582
chr1 6171014 2.48% 6171011
chr2 5690473 2.35% 5690471
chr3 4750317 2.40% 4750316
chr4 3352406 1.76% 3352405
chr5 3911827 2.15% 3911826
chr6 4071494 2.38% 4071492
chr7 3694056 2.32% 3694055
chr8 3329140 2.29% 3329140
chr9 2801731 2.02% 2801731
chr10 2973156 2.22% 2973154
chr11 3566151 2.64% 3566150
chr12 3379245 2.54% 3379244
chr13 2030920 1.78% 2030920
chr14 2211841 2.07% 2211840
chr15 2115838 2.07% 2115838
chr16 2155493 2.39% 2155493
chr17 2657952 3.19% 2657952
chr18 1597809 1.99% 1597809
chr19 2388284 4.07% 2388282
chr20 1638751 2.54% 1638749
chr21 725545 1.55% 725545
chr22 1200626 2.36% 1200626
chrX 1861108 1.19% 1861107
chrY 10825 0.02% 9426
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 68284582 1 1375 1 1
global segment-length histogram

Files

Filename Size md5
Brain_c5__mean_pred_corrected.bw 518.67 MB 0047fb6c556e1fe79c6ee0619b206faa
genomic_resource.yaml 1.27 KB 1610102663741662e56eed75a4f4445e
statistics/