Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Brain/c5/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Brain for cell cluster c5
Description
Labels
  • assay: SHARE-seq
  • cluster: Brain_c5
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Brain
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Brain_c5_obs_pval_signal float

liu2026Multiomics_Brain_c5_obs_pval_signal
Macs2 p-value signal track for observed accessibility
 HISTOGRAM FOR liu2026Multiomics_Brain_c5_obs_pval_signal [0, 1.45e+03]
n
3,087,213,783
mean
0.496
sd
3.02

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308721378396.20% 52377817
chr1 248946469 >99.99% 4813446
chr2 242183500 >99.99% 4234126
chr3 198231933 99.97% 3382524
chr4 190204559 99.99% 2344161
chr5 181477725 99.97% 2789000
chr6 170737692 99.96% 2756137
chr7 159335888 99.99% 2804222
chr8 145076419 99.96% 2481982
chr9 138237349 99.89% 2295057
chr10 133787440 99.99% 2311922
chr11 135076572 99.99% 2810198
chr12 133265011 99.99% 2639390
chr13 114354199 99.99% 1404779
chr14 106883382 99.85% 1667952
chr15 101981161 99.99% 1560653
chr16 90226234 99.88% 1886249
chr17 83247366 99.99% 2414528
chr18 80263246 99.86% 1092411
chr19 58607599 99.98% 2330128
chr20 64333415 99.83% 1387329
chr21 46699954 99.98% 537880
chr22 50808458 99.98% 1321476
chrX 156030846 99.99% 1098011
chrY 57217366 99.98% 14256
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 52377817 1 30006515 58.94 15
global segment-length histogram

Files

Filename Size md5
Brain_c5__obs_pval_signal.bw 308.48 MB 60faee99f39126ce2b5e5a1519f2e35e
genomic_resource.yaml 1.23 KB 59f2211e3e862b455bb03614fc09d2d4
statistics/