Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Brain/c6/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Brain for cell cluster c6 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Brain_c6_mean_counts_contribs | float |
liu2026Multiomics_Brain_c6_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0803, 0.203] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 180103484 | 5.61% | 179062885 |
| chr1 | 16312087 | 6.55% | 16218104 |
| chr2 | 14948094 | 6.17% | 14862157 |
| chr3 | 12009286 | 6.06% | 11939089 |
| chr4 | 9029434 | 4.75% | 8974744 |
| chr5 | 10577106 | 5.83% | 10516791 |
| chr6 | 10472810 | 6.13% | 10412758 |
| chr7 | 9884942 | 6.20% | 9828037 |
| chr8 | 8999893 | 6.20% | 8948337 |
| chr9 | 7678609 | 5.55% | 7634499 |
| chr10 | 8386506 | 6.27% | 8337057 |
| chr11 | 9601462 | 7.11% | 9547767 |
| chr12 | 8737991 | 6.56% | 8687959 |
| chr13 | 4937363 | 4.32% | 4908410 |
| chr14 | 5798865 | 5.42% | 5766122 |
| chr15 | 5590786 | 5.48% | 5558132 |
| chr16 | 5729151 | 6.34% | 5695932 |
| chr17 | 7040256 | 8.46% | 7000043 |
| chr18 | 4387692 | 5.46% | 4360524 |
| chr19 | 5549574 | 9.47% | 5519038 |
| chr20 | 4668799 | 7.24% | 4642354 |
| chr21 | 1858447 | 3.98% | 1847711 |
| chr22 | 3170099 | 6.24% | 3152354 |
| chrX | 4727890 | 3.03% | 4700767 |
| chrY | 6342 | 0.01% | 4199 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 179062885 | 1 | 2114 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Brain_c6__mean_counts_contribs.bw | 1.08 GB | 22337ebf703e27fb5c39b500ec7b6c7e |
| genomic_resource.yaml | 1.31 KB | a040fc2e8a91f61ad9974d21ab909d44 |
| statistics/ |
