Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Brain/c6/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Brain for cell cluster c6
Description
Labels
  • assay: SHARE-seq
  • cluster: Brain_c6
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Brain
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Brain_c6_mean_pred_corrected float

liu2026Multiomics_Brain_c6_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Brain_c6_mean_pred_corrected [1.21e-05, 45.8]
n
97,049,810
mean
0.227
sd
0.522

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 970498103.02% 97048842
chr1 8803103 3.54% 8803101
chr2 8034917 3.32% 8034912
chr3 6422632 3.24% 6422629
chr4 4821439 2.53% 4821439
chr5 5696135 3.14% 5696135
chr6 5641992 3.30% 5641989
chr7 5301992 3.33% 5301987
chr8 4815431 3.32% 4815429
chr9 4150531 3.00% 4150527
chr10 4499023 3.36% 4499021
chr11 5205581 3.85% 5205576
chr12 4718304 3.54% 4718302
chr13 2638222 2.31% 2638222
chr14 3129856 2.92% 3129853
chr15 3015349 2.96% 3015346
chr16 3069502 3.40% 3069502
chr17 3862780 4.64% 3862778
chr18 2335304 2.91% 2335302
chr19 3100131 5.29% 3100130
chr20 2505722 3.89% 2505717
chr21 999324 2.14% 999324
chr22 1717410 3.38% 1717410
chrX 2562130 1.64% 2562130
chrY 3000 0.01% 2081
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 97048842 1 910 1 1
global segment-length histogram

Files

Filename Size md5
Brain_c6__mean_pred_corrected.bw 735.09 MB 6c813d6d9e236506ab5ae798329ca333
genomic_resource.yaml 1.27 KB 2bcaa3d66197a355ad4b41c18a259791
statistics/