Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Brain/c7/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Brain for cell cluster c7
Description
Labels
  • assay: SHARE-seq
  • cluster: Brain_c7
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Brain
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Brain_c7_mean_pred_corrected float

liu2026Multiomics_Brain_c7_mean_pred_corrected
bias-corrected accessibility predicted by ChromBPNet
 HISTOGRAM FOR liu2026Multiomics_Brain_c7_mean_pred_corrected [0.00182, 20.5]
n
62,089,829
mean
0.155
sd
0.315

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 620898291.93% 62089800
chr1 5777134 2.32% 5777131
chr2 5063826 2.09% 5063825
chr3 4122175 2.08% 4122174
chr4 2821286 1.48% 2821282
chr5 3483773 1.92% 3483771
chr6 3609460 2.11% 3609457
chr7 3278297 2.06% 3278296
chr8 3099358 2.14% 3099356
chr9 2559499 1.85% 2559498
chr10 2864013 2.14% 2864010
chr11 3339241 2.47% 3339237
chr12 3052715 2.29% 3052715
chr13 1613333 1.41% 1613332
chr14 1984766 1.85% 1984765
chr15 1930516 1.89% 1930516
chr16 2084140 2.31% 2084140
chr17 2624504 3.15% 2624503
chr18 1319561 1.64% 1319561
chr19 2420319 4.13% 2420318
chr20 1584548 2.46% 1584548
chr21 633687 1.36% 633687
chr22 1245095 2.45% 1245095
chrX 1578583 1.01% 1578583
432 contigs with no values (178243688 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 62089800 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Brain_c7__mean_pred_corrected.bw 470.95 MB 9aa3b37ff4c2cb63f757cc0a62017871
genomic_resource.yaml 1.27 KB f364578e0958babb94a1f41e6f8c5cef
statistics/